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Binding structures

Murthy, V.L., 5tern, L.J. The class II MHC protein HLA-Drl in complex with an endogenous peptide implications for the structural basis of the specificity of peptide binding. Structure 5 1385-1396, 1997. [Pg.322]

Surface composition and structure of bimetallic nanoparticles are crucially important for their catalytic property as well as their optical property. IR measurement of CO adsorbed on surface metals (CO-IR) is utilized for this purpose. CO is adsorbed on metals not only on-top sites but also in two-fold or three-fold sites, depending on the kinds of metals and their surface structures. The dramatical changes of wavenumber of adsorbed CO occurs depending on the binding structure [177-181]. [Pg.64]

Leenheer, J. A., Brown, G. K., MacCarthy, P. and Cabaniss, S. E. (1998). Models of metal binding structures in fulvic acid from the Suwannee River, Georgia, Environ. Sci. Technol., 32, 2410-2416. [Pg.257]

TOO 4 hERG Channel Physiology and Drug-Binding Structure-Activity Relationships... [Pg.100]

A conserved cAMP- or cGMP-binding structure spans about 120 amino-acid residues assembled into 3 a-helices, and 8 strands assembled in antiparallel giving rise to a 3 barrel. [Pg.439]

The bradykinin receptor is a member of a family of receptors for which an intracellular interaction with a G-protein is a critical part of the signal transduction pathway following agonist binding. Structurally, these G-protein-coupled receptors extend from beyond the extracellular boundary of the cell membrane into the cytoplasm. The tertiary structure is such that the protein crosses the bilayer of the cell membrane seven times, thus forming three intracellular loops, three extracellular loops, and giving rise to cytoplasmic C-terminal and extra-cellular N-terminal strands. It is generally presumed that the transmembrane domains of these receptors exist as a bundle of helical strands. This assumption is derived primarily from the known structure of the trans-membrane portions of a structurally related protein, bacteriorhodopsin [40]. [Pg.131]

Nobody knows how many different DNA-binding structures may be discovered. However, most of those that are designed to recognize specific DNA sequences have some part that fits into the major groove of B-DNA.416 Usually the DNA structure must be in a specific form B-, A- or Z-, but it may sometimes be bent or distorted. The DNA recognition motifs in the proteins may consist of helices, (3 strands, or loops. [Pg.241]

The evidence suggests that the various transport systems and the mutarotase protein must contain some glucose-binding structure of peculiar suitability, which has led to its retention through a long evolutionary history in recognizable form. There is persuasive evidence... [Pg.310]

Another DNA-binding motif very common in eukaryotic regulatory proteins is the zinc finger. This motif was first identified as the DNA-binding structure in the RNA poly-... [Pg.814]

Table 8 Bond lengths (in A) between chemically active surface metal (M) and oxygen (0) atoms in different metal oxides. Large differences in M-M and M-0 distances between the different surfaces may be an important factor for the relative stability of different adsorption modes which typically involve different surface atoms in the surface-adsorbate bonding. It can be noted that two binding structures were proposed for TiC>2 anatase (101), depending on environmental influences. Table 8 Bond lengths (in A) between chemically active surface metal (M) and oxygen (0) atoms in different metal oxides. Large differences in M-M and M-0 distances between the different surfaces may be an important factor for the relative stability of different adsorption modes which typically involve different surface atoms in the surface-adsorbate bonding. It can be noted that two binding structures were proposed for TiC>2 anatase (101), depending on environmental influences.
Matem U, Schleberger C, Jelakovic S, Weckesser J, Schulz GE (2003) Binding Structure of Elastase Inhibitor Scyptolin A. Chem Biol 10 997... [Pg.431]

Banuelos, S., Saraste, M., and Carugo, K. D. (1998). Structural comparisons of calponin homology domains Implications for actin binding. Structure 6, 1419-1431. [Pg.233]

It is conceivable that the natural receptor binding structure for Sendai virus has only one terminal NeuAc residue, but it is also possible that some of the oligosaccharide moieties received a disialosyl linkage during the incubation with the specific sialyltransferase. [Pg.387]

Rogerson FM, Brennan FE, Fuller PJ. Mineralocorticoid receptor binding, structure and function. Mol Cell Endocrinol. 2004 217 203-212. [Pg.432]

Albumin has two binding sites Site I binds structurally unrelated substances (e.g., warfarin, phenytoin, and sulfonamides), and Site II, which is more selective, binds a smaller number of drugs (i.e., diazepam, phenylbutazone, and ibuprofen). [Pg.10]


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See also in sourсe #XX -- [ Pg.36 ]




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Acetylcholine-binding protein crystal structure

Acetylcholine—structure, SAR, and receptor binding

Adipocyte lipid-binding protein structure

Amorphous structures, tight-binding

Arabinose-binding protein structure

Binding Specificity and Structure of SH2 Domains

Binding and Dynamic Aspects of Metallothionein Structure

Binding energy differences structures

Binding ligand structures, electrochemical

Binding protein temperature-dependent structural

Binding proteins structures

Binding structural biology

Binding structure specificity

Binding to distorted DNA structures

Calcium-binding protein structure

Cannabinoid structure binding relationships

Cellular retinoid-binding proteins structure

Cellular retinol-binding protein structure

Correlating 3D Structure to Human Serum Albumin Binding

Covalent binding chemical structure

Crystal structures methyl binding domains

Dehydrogenases NAD binding structure

Electronic structure computations density functional tight-binding

Electronic structure tight binding

Electronic structure tight-binding molecular dynamics

FK506-binding proteins solution structure

Fatty acid-binding proteins structure

Flexible Structures in DNA-binding Proteins

Imidazoline binding structures

Inhibitor Structures in the SD Binding Niche

Inhibitor binding primary structure

Inhibitor binding tertiary structure

Inhibitor binding three-dimensional structure

Intestine, fatty acid-binding proteins structure

Large Kinetic Consequences of Remote Changes in Enzyme or Substrate Structure Intrinsic Binding Energy and the Circe Effect

Ligand binding in protein crystal structures

Ligand binding structure-function relationships

Lipid-binding proteins structural motif

Macromolecular structures binding

Myosin binding region structure

Pheromone binding protein structure

Pheromone binding structure

Platelet-activating factor , binding structure

Privileged Structures Bind to Many Different Targets

Quantitative structure-activity relationship estrogen receptor binding affinity

Retinol-binding protein chemical structure

Retinol-binding protein structure

SH3 Structure and Ligand Binding

SUBJECTS metal binding, structural studies

Sigmoidal binding curves structure

Solvent binding sites crystal structures

Strong ionic binding Structural

Structural Changes Upon Binding

Structural Determinants of Ligand Binding and Receptor Activation by CC Chemokines

Structural Hyaluronan-Binding Proteins

Structural Interpretation of Drug Binding

Structural Motifs in DNA-Binding Proteins

Structural Motifs of DNA-Binding Proteins

Structural Requirements for Receptor Binding

Structural binding motifs

Structural of binding sites

Structure PAPS binding

Structure and DNA binding

Structure binding cavity

Structure binding sites

Structure common binding groups

Structure of Dehydrogenase and Substrate Binding

Structure of the Binding Site

Structure of the Binding Site for Antithrombin

Structure of the Light Chain Binding Region

Structure similarities with bacteria] binding proteins

Structure similarities with bacterial binding

Structure substrate binding

Structure tryptophan binding

Structure-based analysis of HIV-1 protease-inhibitor binding

Structure-based computational models of ligand-protein binding dynamics and molecular docking

Structure-binding relations

Structure-binding relationship

Structures reversible anion binding

Surface structure, binding energy

Tight-binding molecular dynamics structure calculations

Transition structure binding

Understanding the Overall Structure of GpdQ and Metal Binding

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