Nucleic acids DNA

Oligosaccharides Nucleic acids DNA fragments TSK-GEL G-Oligo-PW, TSK-GEL G2000PW TSK-GEL G2500PWxl Small particles, high resolving power... 

This enzyme interconverts ribulose-5-P and ribose-5-P via an enediol intermediate (Figure 23.30). The reaction (and mechanism) is quite similar to the phosphoglucoisomerase reaction of glycolysis, which interconverts glucose-6-P and fructose-6-P. The ribose-5-P produced in this reaction is utilized in the biosynthesis of coenzymes (including N/ DH, N/ DPH, F/ D, and Big), nucleotides, and nucleic acids (DNA and RNA). The net reaction for the first four steps of the pentose phosphate pathway is... 

The nucleic acids DNA (deoxyribonucleic acid) and RNA (ribonucleic acid) are biological polymers that act as chemical carriers of an organism s genetic information. Enzyme-catalyzed hydrolysis of nucleic acids yields nucleotides, the monomer units from which RNA and DNA are constructed. Further enzyme-catalyzed hydrolysis of the nucleotides yields nucleosides plus phosphate. Nucleosides, in turn, consist of a purine or pyrimidine base linked to Cl of an aldopentose sugar—ribose in RNA and 2-deoxyribose in DNA. The nucleotides are joined by phosphate links between the 5 phosphate of one nucleotide and the 3 hydroxyl on the sugar of another nucleotide. 

The two strands of the nucleic acid DNA are held together by four organic bases. The structure of one of these bases, thymine, is shown below, (a) How many protons can this base accept (b) Draw the structure of each conjugate acid that can be formed, (c) Mark with an asterisk any structure that can show amphiprotic behavior in aqueous solution. 

This series in heterocychc chemistry is being introduced to collectively make available critically and comprehensively reviewed hterature scattered in various journals as papers and review articles. All sorts of heterocyclic compounds originating from synthesis, natural products, marine products, insects, etc. will be covered. Several heterocyclic compounds play a significant role in maintaining life. Blood constituents hemoglobin and purines, as well as pyrimidines, are constituents of nucleic acid (DNA and RNA). Several amino acids, carbohydrates, vitamins, alkaloids, antibiotics, etc. are also heterocyclic compounds that are essential for life. Heterocyclic compounds are widely used in clinical practice as drugs, but all applications of heterocyclic medicines can not be discussed in detail. In addition to such applications, heterocyclic compounds also find several applications in the plastics industry, in photography as sensitizers and developers, and the in dye industry as dyes, etc. 

M0LLEGAARD N.E., BuCHARDT O., Egholm M., Nielsen P.E. Peptide nucleic acid-DNA strand displacement loops as artificial transcription promoters. Proc. Natl Acad. Sci. USA 1994 91 3892-3895. 

Hybridization The specific reassociation of complementary strands of nucleic acids (DNA with DNA, DNA with RNA, or RNA with RNA). 

Bifunctional adamantyl, as a hydrophobic central core, can be used to construct peptidic scaffolding [151], as shown in Fig. 27. This is the reason why adamantane is considered one of the best MBBs. This may be considered an effective and practical strategy to substitute different amino acids or DNA segments on the adamantane core (Fig. 28). In other words, one may exploit nucleic acid (DNA or RNA) sequences as linkers and DNA hybridization (DNA probe) to attach to these modules with an adamantane core. Thus a DNA-adamantane-amino acid nanostructure may be produced. 

Genetic informahon for viral reproduchon resides in its nucleic acid (DNA or RNA see Chapter 3). The viral particle (virion) does not possess enzymes necessary for its own replication after entry into the host cell, the vims uses the enzymes already present or induces the formahon of new ones. Vimses replicate by synthesis of their separate components followed by assembly. 

Polymers are substances whose molecules are very large, formed by the combination of many small and simpler molecules usually referred to as monomers. The chemical reaction by which single and relatively small monomers react with each other to form polymers is known as polymerization (Young and Lovell 1991). Polymers may be of natural origin or, since the twentieth century, synthesized by humans. Natural polymers, usually referred to as biopolymers, are made by living organisms. Common examples of biopolymers are cellulose, a carbohydrate made only by plants (see Textbox 53) collagen, a protein made solely by animals (see Textbox 61), and the nucleic acid DNA, which is made by both plants and animals (see Textbox 64). 

Deoxyribose nucleic acid (DNA) Comprises a backbone with four nucleotide bases, adenine, cytosine, guanine and thymine, bound to it. The genetic information in all cells is encoded in this genome of double-stranded DNA, comprising 3 billion base pairs located in the chromosomes. 

In the version of evolutionary theory popularised by Dawkins (1976), the fundamental unit of life is a gene, a conceptual abstraction clothed in the biochemistry of the nucleic acid DNA. The purpose, or telos, of this gene is replication - to make copies of itself - copies which because of random chemical and physical processes maybe more or less accurate. The particular chemical structure of DNA provides a mechanism whereby such faithful copying can readily occur - as James Watson and Francis Crick pointed out... 

Nucleic acids, DNA and RNA, are attractive biopolymers that can be used for biomedical applications [175,176], nanostructure fabrication [177,178], computing [179,180], and materials for electron-conduction [181,182]. Immobilization of DNA and RNA in well-defined nanostructures would be one of the most unique subjects in current nanotechnology. Unfortunately, a silica surface cannot usually adsorb duplex DNA in aqueous solution due to the electrostatic repulsion between the silica surface and polyanionic DNA. However, Fujiwara et al. recently found that duplex DNA in protonated phosphoric acid form can adsorb on mesoporous silicates, even in low-salt aqueous solution [183]. The DNA adsorption behavior depended much on the pore size of the mesoporous silica. Plausible models of DNA accommodation in mesopore silica channels are depicted in Figure 4.20. Inclusion of duplex DNA in mesoporous silicates with larger pores, around 3.8 nm diameter, would be accompanied by the formation of four water monolayers on the silica surface of the mesoporous inner channel (Figure 4.20A), where sufficient quantities of Si—OH groups remained after solvent extraction of the template (not by calcination). 

Those nucleosides found in the nucleic acids DNA and RNA involve the joining of ribose of deoxyribose to a purine or a pyrimidine base. One such nucleoside is adenosine, in which a nitrogen of adenine is linked to carbon 1 of the pentose, ribose. In this form it is a component of RNA but as a phosphory-lated derivative of adenosine (e.g. ATP), which is a high energy compound, it fulfils an important role in metabolism. The dinucleotides NAD and NADP are two cofactors necessary for many enzymic transformations and these also contain /V-glycosides of ribose phosphate. Other important nucleosides are found... 

Through van der Waals and hydrophobic interactions, CNTs were functionalised and made water soluble by the strong adsorption of phospholipids (PLs) grafted onto amino-terminated polyethylene glycol (PEG). The group of Dai bound nucleic acids (DNA and RNA) and proteins to CNTs for specific detection of antibodies (Chen et al., 2003 Kam et al., 2005a, b Liu et al., 2007b). 

Nucleic acids (DNA and RNA) are assembled liom nucleotides, which consist of three components a nitrogenous base, a five-carbon sugar (pentose), and phosphate. 

In 1953, James Watson and Francis Crick (Figure 9) suggested a structure for deoxyribose nucleic acid (DNA). The suggestion had important novel features. One was that it had two helical chains, each coiling around the same axis but having opposite direction. The two helices going in opposite direction, and thus complementing each other, is a simple consequence of the twofold symmetry of the whole double... 

So far, I have described the primary structure of a nucleic acid. DNA is a linear polynucleotide based on 2 -deoxyribose as sugar and A, Ci C, and T as bases. RNA is a linear polynucleotide based on ribose as sugar and A, G, C, and U as bases. In both... 

Nucleic acid DNA Quinolones Nalidixic acid Acetylation... 

The nucleic acids DNA and RNA feature diesters of phosphoric acid... 

Whilst many biochemicals are mono-esters of phosphoric acid, the nucleic acids DNA and RNA (see Section 14.2) provide us with good examples of diesters. A short portion of one strand of a DNA molecule is shown here the most significant difference in RNA is the use of ribose rather than deoxyribose as the sugar unit. 

The nucleic acids DNA (deoxyribonucleic acid) and RNA (ribonucleic acid) are the molecules that play a fundamental role in the storage of genetic information, and the subsequent manipulation of this information. They are polymers whose building blocks are nucleotides, which are themselves combinations... 

In relation to cancer, there is some evidence that highly oxidized and heated fats may have carcinogenic characteristics. HNE (4-hydroxy-2-frans-nonenal), a secondary lipid peroxidation product derived from linoleic acid oxidation, has assumed particular interest because it has shown cytotoxic and mutagenic properties. Its toxicity, as well other secondary lipid peroxidation products (HHE 4-hydroxy-2-frans-hexenal and HOE 4-h yd roxy-2-trans-oc ten al), is explained through the high reactivity with proteins, nucleic acids, DNA, and RNA. Research links them to different diseases such as atherosclerosis, Alzheimer s, and liver diseases (Seppanen and Csallany, 2006). Research is rapidly progressing, but results are still not conclusive. 

Macromolecules may be classified according to different criteria. One criterion is whether the material is natural or synthetic in origin. Cellulose, lignin, starch, silk, wool, chitin, natural rubber, polypeptides (proteins), polyesters (polyhydroxybutyrate), and nucleic acids (DNA, RNA) are examples of naturally occurring polymers while polyethylene, polystyrene, polyurethanes, or polyamides are representatives of their synthetic counterparts. When natural polymers are modified by chemical conversions (cellulose —> cellulose acetate, for example), the products are called modified natural polymers. 

Nucleotides serve as the building blocks for synthesis of the nucleic acids DNA and RNA. 

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