MALDI spectrometry

Mass Spectrometric Detection. The very small volumetric flow rates of less than 1 pi,/min from electrophoresis capillaries make it feasible to couple the effluent directly to the Ionization source of a mass spectrometer. The most common sample-introduction and ionization interface for this purpose is currently electrospray (Section 20B-4), although fast atom bombardment, matrix-assisted laser desorption-ionization (MALDI) spectrometry, and inductively coupled plasma mass spectrometry (ICPMS) have also been used. Because the liquid sample must be vaporized before entering the mass spectrometry (MS) system. 

While advances in automation have increased the throughput of polymer synthesis, macromolecular characterization remains a significant bottleneck in high-throughput approaches. Typical characterization methods such as matrix-assisted laser desorption/ionization (MALDI) spectrometry and nuclear magnetic resonance (NMR) spectroscopy are not yet amenable to high-throughput analysis, while Fourier transform infrared (FTIR) spectroscopy is now available... 

Diels-Alder reactions. Bulky protecting group were used on the outer alkynes, encouraging a selective Diels-Alder reaction. However, the steiic bulk slowed down the reaction rate, which required 11 days for complete conversion. The obtained polyphenylene was then planarized by cyclodehydrogenation to give the hexagonal graphene sheet 63 which was characterized by MALDI spectrometry (Scheme 16). 

Matrix-Assisted Laser Desorption-Ionization Matrix-assisted laser desorption-ionization (MALDI) spectrometry is an ionization method that can be used to obtain accurate molecular mass information about polar biopolymers ranging in molecular mass from a few thousand to several hundred thousand Da. The method was first described nearly simultaneously in 1988 by two research groups, one German and the other Japanese. Commercial instrumentation is available for MALDI. ... 

Until about the 1990s, visible light played little intrinsic part in the development of mainstream mass spectrometry for analysis, but, more recently, lasers have become very important as ionization and ablation sources, particularly for polar organic substances (matrix-assisted laser desorption ionization, MALDI) and intractable solids (isotope analysis), respectively. 

Modern commercial lasers can produce intense beams of monochromatic, coherent radiation. The whole of the UV/visible/IR spectral range is accessible by suitable choice of laser. In mass spectrometry, this light can be used to cause ablation, direct ionization, and indirect ionization (MALDI). Ablation (often together with a secondary ionization mode) and MALDI are particularly important for examining complex, intractable solids and large polar biomolecules, respectively. 

When mass spectrometry was first used as a routine analytical tool, El was the only commercial ion source. As needs have increased, more ionization methods have appeared. Many different types of ionization source have been described, and several of these have been produced commercially. The present situation is such that there is now only a limited range of ion sources. For vacuum ion sources, El is still widely used, frequently in conjunction with Cl. For atmospheric pressure ion sources, the most frequently used are ES, APCI, MALDI (lasers), and plasma torches. 

Laser-desorption mass spectrometry (LDMS) or matrix-assisted laser desorption ionization (MALDI) coupled to a time-of-flight analyzer produces protonated or deprotonated molecular ion clusters for peptides and proteins up to masses of several thousand. 

Peptides and proteins can be analyzed by mass spectrometry. Molecular mass information can be obtained particularly well by MALDI and ESI. 

MALDI = matrix assisted laser desorption, ftms = Fourier transform mass spectrometry TOF = time of flight. 

With the identities and amounts of amino acids known, the peptide is sequenced to find out in what order the amino acids are linked together. Much peptide sequencing is now done by mass spectrometry, using either electrospray ionization (ESI) or matrix-assisted laser desorption ionization (MALDI) linked to a time-of-flight (TOF) mass analyzer, as described in Section 12.4. Also in common use is a chemical method of peptide sequencing called the Edman degradation. 

MALDI (Section 12.4) Matrix-assisted laser desorption ionization a mild method for ionizing a molecule so that fragmentation is minimized during mass spectrometry. 

Major groove (DNA), 1104-1105 Malate, from fumarate, 221-222 MALDI-TOF mass spectrometry, 417-418... 

Matrix-assisted laser desorption mass spectrometry (MALDI-MS) is, after electrospray ionization (ESI), the second most commonly used method for ionization of biomolecules in mass spectrometry. Samples are mixed with a UV-absorbing matrix substance and are air-dried on a metal target. Ionization and desorption of intact molecular ions are performed using a UV laser pulse. 

Peptide mass fingeiprinting (PMF) is a mass spectrometry based method for protein identification. The protein is cleaved by an enzyme with high specificity (trypsin, Lys-C, Asp-N, etc.) or chemical (CNBr). The peptide mixture generated is analyzed by matrix-assisted laser desorp-tion/ionization (MALDI) or electrospray ionization (ESI)... 

Two relatively new techniques, matrix assisted laser desorption ionization-lime of flight mass spectrometry (MALDI-TOF) and electrospray ionization (FS1), offer new possibilities for analysis of polymers with molecular weights in the tens of thousands. PS molecular weights as high as 1.5 million have been determined by MALDI-TOF. Recent reviews on the application of these techniques to synthetic polymers include those by Ilantoif54 and Nielen.555 The methods have been much used to provide evidence for initiation and termination mechanisms in various forms of living and controlled radical polymerization.550 Some examples of the application of MALDI-TOF and ESI in end group determination are provided in Table 3.12. The table is not intended to be a comprehensive survey. 

Table 3.12 Application of MALDI-TOF or ESI Mass Spectrometry to Polymers Prepared by Radical Polymerization...

The molecular weights and molecular weight distributions (MWD) of phenolic oligomers have been evaluated using gel permeation chromatography (GPC),23,24 NMR spectroscopy,25 vapor pressure osmometry (VPO),26 intrinsic viscosity,27 and more recently matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS).28... 

Mandal and Hay28 used MALDI-TOF mass spectrometry to determine the absolute molecular masses and endgroups of 4-phenylphenol novolac resins prepared in xylene or chlorobenzene. Peaks with a mass difference of 44 (the molecular weight of a xylene endgroup) suggested that reactions conducted in xylene included some incorporation of xylene onto the chain ends when a strong acid such as sulfuric acid was used to catalyze the reaction. By contrast, no xylene was reacted into the chain when a milder acid catalyst such as oxalic acid was used. No chlorobenzene was incorporated regardless of the catalyst used. 

Maleamic acid, cyclization of, 293 Maleic anhydride, 59 Maleimido azine, 307 Manganese diacetate catalysts, 71 Mark-Houwink-Sakurada equation, 57 Material safety data sheets (MSDSs), 246 Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOFMS), 385, 388 McGrath, J. E., 327 MDI isomers, 210 MDIs. See Methylene diphenyl diisocyanates (MDIs)... 

During the past decade, MALDI-TOF MS has proven to be an effective tool for the analysis of oligo- and polymeric mannoglucans (for extensive reviews see [222,223]). SEC/MALDI mass spectrometry was employed in the analysis of hemicelluloses isolated by microwave heat-fractionation from spruce and aspen wood [94]. These methods allowed the separation and characterization of the oligo- and polysaccharide fractions derived from the xylan and mannan components of both woods [224]. 

The unseparated digest mixture was studied directly by mass spectrometry using matrix-assisted laser desorption ionization (MALDI) and this showed six of the polypeptides detected by LC-MS and three of the expected polypeptides that had not been detected by LC-MS. In contrast, MALDI did not show three polypeptides observed by LC-MS. 

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