Animals carbonate degradation

Alpha oxidation and omega oxidation. Animal tissues degrade such straight-chain fatty acids as palmitic acid, stearic acid, and oleic acid almost entirely by (3 oxidation, but plant cells often oxidize fatty acids one carbon at a time. The initial attack may involve hydroxylation on the a-carbon atom (Eq. 17-3) to form either the d- or the L-2-hydroxy add.17 18-32 323 The L-hydroxy acids are oxidized rapidly, perhaps by dehydrogenation to the oxo acids (Eq. 17-3, step b) and oxidative decarboxylation, possibly utilizing H202 (see Eq. 15-36). The D-hydroxy acids tend to accumulate... 

Environmental Impact of Ambient Ozone. Ozone can be toxic to plants, animals, and fish. The lethal dose, LD q, for albino mice is 3.8 ppmv for a 4-h exposure (156) the 96-h LC q for striped bass, channel catfish, and rainbow trout is 80, 30, and 9.3 ppb, respectively. Small, natural, and anthropogenic atmospheric ozone concentrations can increase the weathering and aging of materials such as plastics, paint, textiles, and mbber. For example, mbber is degraded by reaction of ozone with carbon—carbon double bonds of the mbber polymer, requiring the addition of aromatic amines as ozone scavengers (see Antioxidants Antiozonants). An ozone decomposing polymer (noXon) has been developed that destroys ozone in air or water (157). 

Fatty acids with odd numbers of carbon atoms are rare in mammals, but fairly common in plants and marine organisms. Humans and animals whose diets include these food sources metabolize odd-carbon fatty acids via the /3-oxida-tion pathway. The final product of /3-oxidation in this case is the 3-carbon pro-pionyl-CoA instead of acetyl-CoA. Three specialized enzymes then carry out the reactions that convert propionyl-CoA to succinyl-CoA, a TCA cycle intermediate. (Because propionyl-CoA is a degradation product of methionine, valine, and isoleucine, this sequence of reactions is also important in amino acid catabolism, as we shall see in Chapter 26.) The pathway involves an initial carboxylation at the a-carbon of propionyl-CoA to produce D-methylmalonyl-CoA (Figure 24.19). The reaction is catalyzed by a biotin-dependent enzyme, propionyl-CoA carboxylase. The mechanism involves ATP-driven carboxylation of biotin at Nj, followed by nucleophilic attack by the a-carbanion of propi-onyl-CoA in a stereo-specific manner. 

The main pathways of the breakdown of fatty acids in biological systems involve oxidation at various points along the chain or oxidation at certain double bonds of specific unsaturated fatty acids (Coultate, 2001 90-98). The main forms of oxidation are termed a-, (3- and to-. They are named depending on which carbon of the chain is attacked. Of these (3-oxidation is the most general and prevalent. Degradation proceeds by the liberation of two-carbon (acetyl-CoA) fragments from the chain. The enzymes responsible for oxidation are widely found in plants, animals and micro-organisms. 

Waxes are biosynthesized by plants (e.g., leaf cuticular coatings) and insects (e.g., beeswax). Their chemical constituents vary with plant or animal type, but are mainly esters made from long-chain alcohols (C22-C34) and fatty acids with even carbon numbers dominant (Fig. 7.11). They may also contain alkanes, secondary alcohols, and ketones. The majority of wax components are fully saturated. The ester in waxes is more resistant to hydrolysis than the ester in triacylglycerols, which makes waxes less vulnerable to degradation, and therefore more likely to survive archaeologically. 

Dissolved humic substances (DHS) are the main constituents of the dissolved organic carbon (DOC) pool in surface waters (freshwaters and marine waters), groundwaters, and soil porewaters and commonly impart a yellowish-brown color to the water system. Despite the different origins responsible for the main structural characteristics of DHS, they all constitute refractory products of chemical and biological degradation and condensation reactions from plant or animal residues and play a crucial role in many biogeochemical processes. 

Other important natural sources of organic chemicals are the so-called fossil fuels - natural gas, petroleum, and coal - all deposited in the earth from the decay of plant and animal remains, and containing thousands of degradation products. Most of these are simple compounds containing only carbon and hydrogen (technically and even reasonably known as hydrocarbons). Natural gas is relatively simple... 

The citric acid cycle is at the heart of aerobic cellular metabolism, or respiration. This is true of both prokaryotic and eukaryotic organisms, of plants and animals, of organisms large and small. Here is the main point. On the one hand, the small molecule products of catabolism of carbohydrates, lipids, and amino acids feed into the citric acid cycle. There they are converted to the ultimate end products of catabolism, carbon dioxide and water. On the other hand, the molecules of the citric acid cycle are intermediates for carbohydrate, lipid, and amino acid synthesis. Thus, the citric acid cycle is said to be amphibolic, involved in both catabolism and anabolism. It is a sink for the products of degradation of carbohydrates, lipids, and proteins and a source of building blocks for them as well. 

Waste products from the degradation of organic substances in animal metabolism include carbon dioxide (CO2), water (H2O), and ammonia (NH3). In mammals, the toxic substance ammonia is incorporated into urea and excreted in this form (see p. 182). 

By contrast, acetyl CoA does not have anaplerotic effects in animal metabolism. Its carbon skeleton is completely oxidized to CO2 and is therefore no longer available for biosynthesis. Since fatty acid degradation only supplies acetyl CoA, animals are unable to convert fatty acids into glucose. During periods of hunger, it is therefore not the fat reserves that are initially drawn on, but proteins. In contrast to fatty acids, the amino acids released are able to maintain the blood glucose level (see p. 308). 

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