Preview option

To set up the page layout for plotting spectra several tasks have to be performed. They include the definition of the plot region, of the spectrum components to be included in the plot (spectrum, integral, peak labels, axis, of the title, of the contents of the parameter table and any additional imported data to be added to the layout such as the formulae or molecular structure. To inspect the final layout prior to plotting. WIN-NMR offers the Preview option which shows an exact copy of your subsequent plot on the screen and allows you to perform final adjustments and rearrangements on the screen. 

Click the Output Font... button and define the output fonts for and the style according to your preferences. Note that this influcences only the fonts in the Spectrum window (peak picking values, scale (ppm/Hz) values), but not the fonts for the title and parameter windows of the plot layout. The latter fonts may be set with the Preview option (4.7.3). 

Adjust the vertical scale and the vertical offset for the main trace spectrum to obtain the best display of the signals for the ring protons. Click on the File Param. button and set the plot limits to 6.0 ppm and 3.5 ppm. Click on both the F1/F2 for all and the Y for all buttons to transfer the plotting information from the reference spectrum to the other six spectra. Click on the OK button to close the dialog box. Do not click on the Return button as this will lose all the Separate Plot plotting parameters that have just been set. From the Output pull-down menu choose the Page Layout option and select the same parameters, options, colors, fonts and the printer setup as used in the multiple display above. Use the Preview option for a final inspection before plotting this Separate Plot layout. 

For setting up the final layout it is often convenient to choose a dual Spectrum Preview window display mode (Fig. 4.19). This is accomplished by choosing the Spectrum/Preview option in the Window pull-down menu of ID WIN-NMR. 

Preview Starts a preview output using previously selected plot options (see... 

Two Auto Arrange options exist to adjust the layout either to fit the plot paper size or to a given layout already existing in the Preview window. If one of these options is checked, some of the fields in this group can no longer be edited. 

Items that are currently active in the Spectrum window can be selected for the hardcopy or Preview output by checking the respective filters in the Display Options group. 

Click on the Frame button and open a second large frame in the Preview window. Double click the left button on the mouse to open the dialog box and click on Read NMR-File... to read in the normal C spectrum of glucose D NMRDATA GLUCOSE 1D C GC 001999.1R. Adjust its size and set the various plot options for this spectrum. Finally readjust the sizes of both windows for the best layout. Open two additional windows and read in the previously saved parameter textfile and the glucose structural formula respectively. Use the Preview Zoom function to inspect the individual... 

Sends the plot as a vector-oriented metafile to the MS-WINDOWS clipboard from where it can be transferred into any other MS-WINDOWS program. The plot area of the output is taken from the currently displayed area in the Spectrum window. Parameter lists and the title cannot be transferred using this method. They can be copied by transferring the output, including the title and lists, first into the Preview window, from where it may be copied to the MS-WINDOWS clipboard using the Copy option in the Edit pull-down menu in the Preview window menu bar. 

For NMR data measured on UXNMR/XWINNMR based spectrometers, these options opens the appropriate dialog box showing the ACQuisition (AQS), the PROCessing (FQS) and the PLOT (PLT) parameters. For NMR data tiles measured on DISNMR/DJSMSL based spectrometers (AM, AC) the corresponding parameters are accessible in the A3000 Parameters. Parameters may be edited, printed oi transferred to the Preview window, from where they may be stored a.s a textfile. 

An additional feature, the Preview window, accessible with the Preview button from within the Page Setup... sub-menu in the Output pull-down menu, displays an exact copy of your plot (WYSIWYG). It is recommended that you exploit this useful option and inspect the layout in this Preview window prior to plotting your 2D NMR spectra in order to avoid a waste of paper and time. 

Attention If the plotted spectrum does not correspond to the preview display, e.g. only part of the spectrum is plotted, and an error message appears on your output device, readjust the set up of the 2D spectrum. It may be that the memory size of your output device is not large enough with respect to the required printing, that the option for a full page plot is disabled or that a configuration parameter for the output device has not been set correctly. 

With the Copy command a copy of the screen contents is stored in the MS-WINDOWS clipboard. If you have more than one window on the screen, the window to be copied may be specified using the mouse. If all windows should be copied into the clipboard use the Copy all command. The Copy options are used to transfer 2D layouts into the Preview window of ID WIN-NMR (see 4.10.5). 

Choose the Page Setup... option in the Output pull-down menu and select the plotting parameters and projections to be included in the plot. Adjust the sizes of all windows (title, parameter, spectrum) to the size of the paper sheet. Set up a title and select the parameters to be plotted. Load the defined levels with the Load button, choose different colors for the levels if you have a multicolor output device. Click the Preview button to inspect the final layout in the Preview window. Repeat these steps, load the defined levels with the Load button as before, but add additional contour levels with the Fill button. 

From the Display pull-down menu choose the Window option and create an additional window within the 2D plot to include the structural formula of glucose. Start a parallel ID WIN-NMR session and load the structure file D NMRDATA GLUCOSE GLUCOSE.WMF) into the ID WIN-NMR Preview window. Copy it into the clipboard with the Copy command in the Edit pulldown menu of ID WIN-NMR. Return to 2D WIN-NMR, activate the additional window and choose the Paste option in the Output pull-down menu. Move the mouse cursor into the additional window and initialize the transfer from the clipboard by clicking the left mouse button. Resize this window if necessary. 

Start 1D WIN-NMR, enter the Preview window and use the Frame option to open a frame for the 2D layout copied into the clipboard in the previous Check it. With the cursor positioned within the frame double click on the left mouse button to open the dialog box. Click on Paste and then OK to Import the 2D layout. Double click the left mouse button and in the Metafile Options dialog box adjust x-Factor and y-Factor to position the 2D layout correctly within the frame. Open additional frames to accommodate the entire 1D C spectrum D. NMRDATA GLUCOSE 1D C GC 001999.1 R) and the structural formula (Fig. 4.33). Arrange and resize these frames for the best representation. Use additional graphical elements (Lines, Rectangle) available within the Preview window of 1D WIN-NMR for assignment purposes. Set up your output device and plot the layout. 

You can do a search by entering one or more terms in the textbox above. Advanced search options are accessible via the Limits, Preview/lndex, History, and ClipTvftftrd ftptif>n in the or v har kiftifrath the twt hfty The OMTMhpIn Annanert pradditional information and examples ofbasic and advanced searches. 

In the ideal case, conventional word processing software can be embedded into a scientific workspace to directly edit and report information in the same software package. Creating a report document in a scientific workspace also allows the transfer of the preview of any file entry to be included, for instance via drag and drop from the file tree to the document. Workspace reports may optionally include placeholders for administrative data, similar to the electronic scientific document. However, in contrast to the latter, this information may be changed or edited. 

It is possible to create publication quality plots with GenomeViz (see Note 4). Once the user is satisfied with the plot created and wants to finally print it, the user can go to File Print. A print dialog box appears with several options. Give the dialog box time to complete its rendering of the print preview plot in the... 

By default the OPUS user interface displays the Browser window on the left side. If you deselect the Browser command, only the spectrum window and the preview will be shown. Besides these options you can also reposition the browser... 

Figure 13.4. Print preview of the IR spectrum of cortisone using the template Basicl.PLE. On the Options page the items Auto Scale to All Spectra and Use Compressed Wavenumbers were checked.

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