2-octanol properties

Octanitrocubane (ONC), 10 742 Octanoic acid, physical properties, 5 29t Octanol, properties of commercial, 2 12t... 

Schwarz G and Savko P 1982 Structural and dipolar properties of the voltage-dependent pore former alamthicin in octanol/dioxane Biophys. J. 39 211-19... 

The flic presented contains 11 data items. The header lines arc property names as used by CACTVS [64, 65], and arc sufficiently self-descriptive. For example, E NHDONORS is the number of hydrogen bond donor.s, E SM1LES" is the SMILES string representing the structure of sulfamidc, and E LOGP is the logP value (octanol/water partition coefficient) for this substance. 

The HYBOT descriptors were successfully applied to the prediction of the partition coefficient log P (>i--octanol/water) for small organic componnds with one acceptor group from their calculated polarizabilities and the free energy acceptor factor C, as well as properties like solubility log S, the permeability of drugs (Caco-2, human skin), and for the modeling of biological activities. 

Two approaches to quantify/fQ, i.e., to establish a quantitative relationship between the structural features of a compoimd and its properties, are described in this section quantitative structure-property relationships (QSPR) and linear free energy relationships (LFER) cf. Section 3.4.2.2). The LFER approach is important for historical reasons because it contributed the first attempt to predict the property of a compound from an analysis of its structure. LFERs can be established only for congeneric series of compounds, i.e., sets of compounds that share the same skeleton and only have variations in the substituents attached to this skeleton. As examples of a QSPR approach, currently available methods for the prediction of the octanol/water partition coefficient, log P, and of aqueous solubility, log S, of organic compoimds are described in Section 10.1.4 and Section 10.15, respectively. 

An example of using one predicted property to predict another is predicting the adsorption of chemicals in soil. This is usually done by first predicting an octanol water partition coelficient and then using an equation that relates this to soil adsorption. This type of property-property relationship is most reliable for monofunctional compounds. Structure-property relationships, and to a lesser extent group additivity methods, are more reliable for multifunctional compounds than this type of relationship. 

An overview of some basic mathematical techniques for data correlation is to be found herein together with background on several types of physical property correlating techniques and a road map for the use of selected methods. Methods are presented for the correlation of observed experimental data to physical properties such as critical properties, normal boiling point, molar volume, vapor pressure, heats of vaporization and fusion, heat capacity, surface tension, viscosity, thermal conductivity, acentric factor, flammability limits, enthalpy of formation, Gibbs energy, entropy, activity coefficients, Henry s constant, octanol—water partition coefficients, diffusion coefficients, virial coefficients, chemical reactivity, and toxicological parameters. 

Many additional consistency tests can be derived from phase equiUbrium constraints. From thermodynamics, the activity coefficient is known to be the fundamental basis of many properties and parameters of engineering interest. Therefore, data for such quantities as Henry s constant, octanol—water partition coefficient, aqueous solubiUty, and solubiUty of water in chemicals are related to solution activity coefficients and other properties through fundamental equiUbrium relationships (10,23,24). Accurate, consistent data should be expected to satisfy these and other thermodynamic requirements. Furthermore, equiUbrium models may permit a missing property value to be calculated from those values that are known (2). 

A chemical must have certain physicochemical properties to elicit an endocrine disrupting effect. For example, the ability to enter the body and to cross the cell membrane into the cellular medium requires a degree of lipophilicity. Fipophilic potentials may be compared by reference to the chemical s octanol-water coefficient (usually expressed as log K ). This property, together with molecular size and chemical structure, has an important influence on the bioacciimiilation... 

Properties of Fluonnated Compounds Table 10. Octanol-Water Partition Coefficients... 

Table 61 presents some important and useful properties of MIBK, TBP and 2-Octanol [72, 458, 474 - 476]. 

Properties Methyl iso-butyl ketone (MIBK) Tributyl phosphate (TBP) 2-octanol... 

Observation, 2,15 Ocean, composition of, 440 Ocean water, composition, 439 n-Octadecane, properties, 341 Octahedral complex, 393 Octane, 46, 338 properties, 341 Octanamide, 339 Octanoic acid, 339 1-Octanol, 338 Octaves, Law of, 104 Octyl alcohol, 338 1-Octylamine, 338... 

An alternative, single mechanism for both bases may be formulated, however, by taking into account the differences in basicity (piCa = 5.25 and 11.01, for Py and EtsN, respectively [148]), and hydrophobicity between the two bases. A quantitative measure of the latter property is given by logP, the partition coefficient of the solute between n-octanol and water (logP = log([solute] octanol/[solute]water)> 0.65 and 1.45 for Py and EtsN, respectively [149]. This unified mechanism is shown in Fig. 4, where B refers to the base employed. 

The toxicological or cumulative effect of illicit drugs on the ecosystems has not been studied yet. Moreover, their fate and transport in the environment is to a big extent still unknown. Due to their physical-chemical properties (octanol-water partition coefficient, solubility, etc.) some of them, such as cannabinoids, are likely to bioaccumulate in organisms or concentrate in sediments whereas the rest, much more polar compounds, will tend to stay in aqueous environmental matrices. However, continuous exposure of aquatic organisms to low aquatic concentrations of these substances, some of them still biologically active (e.g., cocaine (CO), morphine (MOR) and MDMA) may cause undesirable effects on the biota. 

Kier and coworkers found that the molecular connectivity-index and such molecular properties as polarizability, molecular volume," and partition coefficients between water and octanol"" show very good correlation. Because all of these properties could be correlated with biological activity. 

Our first exploration of property space was focused on acetylcholine. This molecule was chosen for its interesting structure, major biological role, and the abundant data available on its conformational properties [15]. The behavior of acetylcholine was analyzed by MD simulations in vacuum, in isotropic media (water and chloroform) [16] and in an anisotropic medium, i.e. a membrane model [17]. Hydrated n-octanol (Imol water/4mol octanol) was also used to represent a medium structurally intermediate between a membrane and the isotropic solvents [17]. 

Octanol-water partition (log P) and distribution (log D) coefficients are widely used to make estimates for membrane penetration and permeability, including gastrointestinal absorption [77, 78], BBB crossing [60, 69] and correlations to pharmacokinetic properties [1]. The two major components of lipophilicity are molecular size and H-bonding [57], which each have been discussed above (see Sections 2.5 and 2.6). 

Traditional octanol-water distribuhon coefficients are shll widely used in quan-titahve structure-achvity relationship (QSAR) and in ADM E/PK studies. However, alternahve solvent systems have been proposed [80]. To cover the variabihty in biophysical characterishcs of different membrane types a set of four solvents has been suggested, somehmes called the critical quartet [81]. The 1,2-dichloroeth-ane-water system has been promoted as a good alternative to alkane-water due to its far better dissolution properties [82, 83], but may find little applicahon because of its carcinogenic properties. 

From an analysis of the key properties of compounds in the World Dmg Index the now well accepted Rule-of-5 has been derived [25, 26]. It was concluded that compounds are most Hkely to have poor absorption when MW>500, calculated octanol-water partition coefficient Clog P>5, number of H-bond donors >5 and number of H-bond acceptors >10. Computation of these properties is now available as a simple but efficient ADME screen in commercial software. The Rule-of-5 should be seen as a qualitative absorption/permeabiHty predictor [43], rather than a quantitative predictor [140]. The Rule-of-5 is not predictive for bioavail-abihty as sometimes mistakenly is assumed. An important factor for bioavailabihty in addition to absorption is liver first-pass effect (metaboHsm). The property distribution in drug-related chemical databases has been studied as another approach to understand drug-likeness [141, 142]. 

Such ion-pair constants are conditional , in that they depend on the concentration of the counterion with which the charged drug molecule enters into the octanol phase as an ion-pair. This is due to the low dielectric property of octanol, inducing charge neutrality upon uptake of charged drug molecules. Extraction constants may be used to explicitly include the participahon of the counterion [18]. 

Polar surface area (PSA) - defined simply as the part of a molecular surface that is polar - is probably, together with the octanol-water partition coefficient, one of the most important parameters used to characterize the transport properties of drugs. PSA has been shown to provide very good correlations with intestinal... 

To further analyze the relationships within descriptor space we performed a principle component analysis of the whole data matrix. Descriptors have been normalized before the analysis to have a mean of 0 and standard deviation of 1. The first two principal components explain 78% of variance within the data. The resultant loadings, which characterize contributions of the original descriptors to these principal components, are shown on Fig. 5.8. On the plot we can see that PSA, Hhed and Uhba are indeed closely grouped together. Calculated octanol-water partition coefficient CLOGP is located in the opposite corner of the property space. This analysis also demonstrates that CLOGP and PSA are the two parameters with... 

The solubility of chemicals, drugs or pollutants in water (S ), in octanol (S ), their saturation concentration in air Qii), as well as their partitioning in the corresponding two-phase systems [octanol-water (P /w = Q/Cw), air-water (Pair/w = C IC ) and air-octanol (Paij/ = C /Co)] are important physicochemical parameters in medicinal chemistry and in environmental research. The following correlahons of those properties with HYBOT descriptors have been published recently [54—58] ... 

Raevsky, 0. A., Grigor ev, V. Ju., Raevskaja, 0. E., Schaper, K.-J. Physicochemical properties/descriptors governing the solubility and partitioning in water-solvent-gas systems. Part 1. Partitioning between octanol and air. 

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