Fourier transform ion cyclotron mass spectrometry

Structural characterization of proteins and peptides using quadrupole ion trap mass spectrometry, Fourier transform-ion cyclotron resonance (FT-ICR) mass spectrometry, and traveling wave ion mobility mass spectrometry... 

Part 2. Ion Conformation and Structure presents discussions of structural characterization of proteins and peptides using quadrupole ion trap mass spectrometry, Fourier transform ion cyclotron resonance mass spectrometry, and the novel method known as traveling wave ion mobility mass spectrometry. In addition to the observation of collective fluctuations of the molecular substructures within biomolecules, the organization of atoms in small ion clusters is investigated using electron diffraction. 

Schaub, T. M., Hendrickson, C. L., Horning, S., Quinn, J. P., Senko, M. W., Marshall, A. G. (2008) High-performance mass spectrometry Fourier transform ion cyclotron resonance at 14.5 tesla. Anal Chem, 80, 3985-3990. 

Fig. 1 Infrared photodissociation action spectra in the fingerprint infrared region Irom fairly early in the modem evolution of spectroscopy of biologically interesting complex ions. These spectra illustrate the use of electrospray ion production, ion trapping mass spectrometry (Fourier-transform ion cyclotron resonance in these examples) and the FELIX free electron laser light source. Lower spectrum originally derived from [10, 11] middle spectrum frran [12] upper spectrum from [13]. Figure reproduced with permission from [12]...

Schaub, T.M. Hendrickson, C.L. Homing, S. Quinn, J.P. Senko, M.W. Marshall, A.G. High-Performance Mass Spectrometry Fourier Transform Ion Cyclotron Resonance at 14.5 Tesla. Anal. Chem. 2008, 80, 3985-3990. 

Perfluoroethylenes have been characterized by desorption chemical ionization and tandem mass spectrometry Fourier transform ion cyclotron resonance mass spectroscopy has also been applied to the identification of polymers, eg. polyethylene glycols. Comparative complimentary plasma desorption mass spectrometry/secondary ion mass spectrometry has been applied to the identification of oligomers of various polymers including polyethylene glycol, polytetrafluoroethylene, polycarbonate, polyacrylates, polyethylene terephthalate and siloxanes. ... 

The advent of techniques that enable the study of fast reactions in the gas phase, such as ion cyclotron resonance (ICR) spectrometry, Fourier-transform ion cyclotron resonance spectrometry (FT-ICR) and high pressure mass spectrometry (HPMS), allowed the measurement of the gas-phase proton affinities for strong bases84-86 as well as for... 

Shi, S.D. Hendrickson, C.L. Marshall, A.G. Siegel, M.M. Kong, R Carter, G.T. Structural Validation of Saccharomicins by High Resolution and High Mass Accuracy Fourier Transform-Ion Cyclotron Resonance-Mass Spectrometry and Infrared Multiphoton Dissociation Tandem Mass Spectrometry, J. Am. Soc. Mass Spectrom. 10(12), 1285-1290(1999). 

Shi, S.D.-H., Hendrickson, C.L., Marshall, A.G., Siegel, M.M., Kong, F. and Carter, C.T. (1999) Structural validation of saccharomicins by high resolution and high mass accuracy Fourier transform-ion cyclotron resonance-mass spectrometry and Infrared multiphoton dissociation tandem mass spectrometry. Journal of the American Society for Mass Spectrometry 1 0, 1285-1290... 

Vartanian V H, Anderson J S and Laude D A 1995 Advances in trapped ion cells for Fourier transform ion cyclotron resonance mass spectrometry Mass Spec. Rev. 41 1-19... 

FTICR. Fourier-transform ion cyclotron resonance GC/IRMS. gas chromatography isotope ratio mass spectrometry... 

Jensen P.K., Pasa-Tolic L., Anderson G. A., Horner J. A., Lipton M.S., Bruce J.E., and Smith R.D., Probing proteomes using capillary isolectric focusing-elec-trospray ionization Fourier transform ion cyclotron resonance mass spectrometry, Anal. Chem. 71, 2076, 1999. 

Resolution does not affect the accuracy of the individual accurate mass measurements when no separation problem exists. When performing accurate mass measurements on a given component in a mixture, it may be necessary to raise the resolution of the mass spectrometer wherever possible. Atomic composition mass spectrometry (AC-MS) is a powerful technique for chemical structure identification or confirmation, which requires double-focusing magnetic, Fourier-transform ion-cyclotron resonance (FTICR) or else ToF-MS spectrometers, and use of a suitable reference material. The most common reference materials for accurate mass measurements are perfluorokerosene (PFK), perfluorotetrabutylamine (PFTBA) and decafluorotriph-enylphosphine (DFTPP). One of the difficulties of high-mass MS is the lack of suitable calibration standards. Reference inlets to the ion source facilitate exact mass measurement. When appropriately calibrated, ToF mass... 

In mass spectrometers, ions are analysed according to the ml7. (mass-to-charge) value and not to the mass. While there are many possible combinations of technologies associated with a mass-spectrometry experiment, relatively few forms of mass analysis predominate. They include linear multipoles, such as the quadrupole mass filter, time-of-flight mass spectrometry, ion trapping forms of mass spectrometry, including the quadrupole ion trap and Fourier-transform ion-cyclotron resonance, and sector mass spectrometry. Hybrid instruments intend to combine the strengths of the component analysers. 

Fourier-Transform Ion-Cyclotron Resonance Mass Spectrometry... 

B. Asamoto (ed.), FT-ICR/MS Applications of Fourier Transform Ion Cyclotron Resonance Mass Spectrometry, VCH Publishers, New York, NY (1991). 

Fourier transform ion cyclotron resonance mass spectrometry... 

CsFeo.72Agi.28Te2,1053 and Cs2Ag2ZrTe4. The latter has a structure that comprises 2D slabs of Ag- and Zr-centered tetrahedral separated by Cs+ cations.1054 Gas-phase silver chalcogenide ions of the type [Ag2 i E ] (E = S, Se, Te) with < 14 have been investigated by laser-ablation Fourier transform ion cyclotron resonance mass spectrometry.1055... 

Currently PCR and mass spectrometry are performed by two separate instruments. However, there is no reason why PCR followed by simple automated cleanup and mass spectrometry cannot be incorporated into a single integrated instrument. Essentially every configuration of the modern ESI mass spectrometer has been used successfully for the analysis of PCR products, from the highest to the lowest resolution involving. Fourier transform ion cyclotron resonance (FTICR), triple quadrupole, quadrupole-time of flight (Q-TOF), and ion trap.22-24 MS discriminates between two structurally related PCR products by MW difference. Mass accuracy is needed to differentiate the... 

Wunschel, D. S. Fox, K. F. Bruce, J. E. Muddiman, D. C. Smith, R. D. Analysis of double-stranded polymerase chain reaction products from the Bacillus cereus group by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Rapid Comm. Mass Spectrom 1996,10, 29-35. 

Leinweber, F.C., Schmid, D.G., Lubda, D., Wiesmuller, K., Jung, G., Tallarek, U. (2003). Silica-based monoliths for rapid peptide screening by capillary hquid chromatography hyphenated with electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Rapid Commun. Mass. Spectrom. 17, 1180-1188. 

Kalkhof, S. et al. (2005a) Chemical cross-linking and high-performance fourier transform ion cyclotron resonance mass spectrometry for protein interaction analysis Application to a calmodulin/target peptide complex. Anal. Chem. 77, 495-503. 

Multiple mass analyzers exist that can perform tandem mass spectrometry. Some use a tandem-in-space configuration, such as the triple quadrupole mass analyzers illustrated (Fig.3.9). Others use a tandem-in-time configuration and include instruments such as ion-traps (ITMS) and Fourier transform ion cyclotron resonance mass spectrometry (FTICRMS or FTMS). A triple quadrupole mass spectrometer can only perform the tandem process once for an isolated precursor ion (e.g., MS/MS), but trapping or tandem-in-time instruments can perform repetitive tandem mass spectrometry (MS ), thus adding n 1 degrees of structural characterization and elucidation. When an ion-trap is combined with HPLC and photodiode array detection, the net result is a profiling tool that is a powerful tool for both metabolite profiling and metabolite identification. 

Resolutions in the range of 10,000 to 20,000 are achievable with modem time-of-flight mass spectrometry (TOFMS). Fourier transform ion cyclotron resonance mass spectrometry (FTICRMS) is more costly but capable of resolutions exceeding 100,000. Resolutions exceeding 10,000 can provide low to sub parts-per-million mass accuracies. One ppm is equivalent to a mass accuracy of 0.001 for a molecular weight of 1,000 Da. 

DGE a AC AMS APCI API AP-MALDI APPI ASAP BIRD c CAD CE CF CF-FAB Cl CID cw CZE Da DAPCI DART DC DE DESI DIOS DTIMS EC ECD El ELDI EM ESI ETD eV f FAB FAIMS FD FI FT FTICR two-dimensional gel electrophoresis atto, 10 18 alternating current accelerator mass spectrometry atmospheric pressure chemical ionization atmospheric pressure ionization atmospheric pressure matrix-assisted laser desorption/ionization atmospheric pressure photoionization atmospheric-pressure solids analysis probe blackbody infrared radiative dissociation centi, 10-2 collision-activated dissociation capillary electrophoresis continuous flow continuous flow fast atom bombardment chemical ionization collision-induced dissociation continuous wave capillary zone electrophoresis dalton desorption atmospheric pressure chemical ionization direct analysis in real time direct current delayed extraction desorption electrospray ionization desorption/ionization on silicon drift tube ion mobility spectrometry electrochromatography electron capture dissociation electron ionization electrospray-assisted laser desorption/ionization electron multiplier electrospray ionization electron transfer dissociation electron volt femto, 1CT15 fast atom bombardment field asymmetric waveform ion mobility spectrometry field desorption field ionization Fourier transform Fourier transform ion cyclotron resonance... 

Figure 2.19. Schematic of a Fourier transform ion cyclotron resonance (FTICR) mass spectrometer (a) and a cylindrical cell (b). Reprinted from A. Westman-Brinkmalm and G. Brinkmalm (2002). In Mass Spectrometry and Hyphenated Techniques in Neuropeptide Research, J. Silberring and R. Ekman (eds.) New York John Wiley Sons, 47-105. With...

A. G. Marshall. Milestones in Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Technique Development. Int. J. Mass Spectrom., 200(2000) 331-356. 

S. D.-H. Shi, C. L. Hendrickson, and A. G. Marshall. Counting Individual Sulfur Atoms in a Protein by Ultrahighresolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Experimental Resolution of Isotopic Fine Structure in Proteins. Proc. Natl. Acad. Sci. U.S.A., 95(1998) 11532-11537. 

A. G. Marshall, C. L. Hendrickson, M. R. Emmett, R. P. Rodgers, G. T. Blakney, and C. L. Nilsson. Fourier Transform Ion Cyclotron Resonance State of the Art (Abstr.). 17th International Mass Spectrometry Conference, 27 August-September 1, 2006, Prague, Czech Republic, p. MoOr-21. 

M. E. Belov, M. V. Gorshkov, H. R. Udseth, G. A. Anderson, and R. D. Smith. Zeptomole-Sensitivity Electrospray Ionization-Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of Proteins. Anal. Chem., 72(2000) 2271-2279. 

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