Sulfur atomic

The major part of the sulfur contained in crude petroleum is distributed between the heavy cuts and residues (Table 8.10) in the form of sulfur compounds of the naphthenophenanthrene or naphthenoanthracene type, or in the form of benzothiophenes, that is, molecules having one or several naphthenic and aromatic rings that usually contain a single sulfur atom. 

Figure A3.10.3 STM images of the early stages of sulfur segregation on Ni(l 11). Sulfur atoms are seen to preferentially mieleate at step edges [8],...

The. AMBKR force field expects lone pairs to be added to all sulfur atom s an d computes th e in teraction s as if these Ion e pairs were atoms with a specific type just like any oth er atom. I h e templates automatically add the expected lone pairs to sulfur atoms when using the. AMHhIR force field. 

Amorphous or "plastic" sulfur is obtained by fast cooling of the crystalline form. X-ray studies indicate that amorphous sulfur may have a helical structure with eight atoms per spiral. Crystalline sulfur seems to be made of rings, each containing eight sulfur atoms, which fit together to give a normal X-ray pattern. 

The large sulfur atom is a preferred reaction site in synthetic intermediates to introduce chirality into a carbon compound. Thermal equilibrations of chiral sulfoxides are slow, and parbanions with lithium or sodium as counterions on a chiral carbon atom adjacent to a sulfoxide group maintain their chirality. The benzylic proton of chiral sulfoxides is removed stereoselectively by strong bases. The largest groups prefer the anti conformation, e.g. phenyl and oxygen in the first example, phenyl and rert-butyl in the second. Deprotonation occurs at the methylene group on the least hindered site adjacent to the unshared electron pair of the sulfur atom (R.R. Fraser, 1972 F. Montanari, 1975). 

In cyclic sulfoxides Che diastereomeric product ratio is even higher, and the chirality of the sulfur atom has been efficiently transferred to the carbon atom in synthesis. 

The problem of the synthesis of highly substituted olefins from ketones according to this principle was solved by D.H.R. Barton. The ketones are first connected to azines by hydrazine and secondly treated with hydrogen sulfide to yield 1,3,4-thiadiazolidines. In this heterocycle the substituents of the prospective olefin are too far from each other to produce problems. Mild oxidation of the hydrazine nitrogens produces d -l,3,4-thiadiazolines. The decisive step of carbon-carbon bond formation is achieved in a thermal reaction a nitrogen molecule is cleaved off and the biradical formed recombines immediately since its two reactive centers are hold together by the sulfur atom. The thiirane (episulfide) can be finally desulfurized by phosphines or phosphites, and the desired olefin is formed. With very large substituents the 1,3,4-thiadiazolidines do not form with hydrazine. In such cases, however, direct thiadiazoline formation from thiones and diazo compounds is often possible, or a thermal reaction between alkylideneazinophosphoranes and thiones may be successful (D.H.R. Barton, 1972, 1974, 1975). 

Two efficient syntheses of strained cyclophanes indicate the synthetic potential of allyl or benzyl sulfide intermediates, in which the combined nucleophilicity and redox activity of the sulfur atom can be used. The dibenzylic sulfides from xylylene dihalides and -dithiols can be methylated with dimethoxycarbenium tetrafiuoroborate (H. Meerwein, 1960 R.F. Borch, 1968, 1969 from trimethyl orthoformate and BFj, 3 4). The sulfonium salts are deprotonated and rearrange to methyl sulfides (Stevens rearrangement). Repeated methylation and Hofmann elimination yields double bonds (R.H. Mitchell, 1974). 

The high nucleophilicity of sulfur atoms is preserved, even if it is bound to electron withdrawing carbonyl groups. Thiocarboxylales, for example, substitute bromine, e.g. of a-bromo ketones. In the presence of bases the or-acylthio ketones deprotonate and rearrange to episulfides. After desulfurization with triphenylphosphine, 1,3-diketones are formed in good yield. Thiolactams react in the same way, and A. Eschenmoser (1970) has used this sequence in his vitamin B]2 synthesis (p. 261). 

The high regioselectivity ( stereoelectronic control ) in the ring cleavage by chlorination of sulfur was anticipated. It had been found before that in corresponding bicyclic systems such as in the scheme below oxidation of the sulfur atom always led to the undesired cleavage of the S—Cg bond. This was rationalized through the observation on molecular models that... 

Pyridone (333) is allylated with allylic carbonates on the nitrogen atom rather than on the oxygen atom, but 2-thiopyridone (334) is allylated on the sulfur atom[204]. 

The sulfur atom of the thiocarbonyl group is a good nucleophile, and reaction between benzyl bromide and l-(2-thiazolyl)thiourea yields the isothiouronium salt (496). The sulfur atom may also be engaged in a chelate, as exemplified by the Cu chelate of 2-thioureido-4-methylthiazole (491). These chelates with metal ions were thoroughly studied in acidic, neutral, and alkaline media for 66 metal ions in order to define their analytical use. They are formed in the molar ratio of 1 2 for metal II compounds (498). 

A recent report (62). using UNDO approximations, describes and interprets the phoioelectronic spectra of A-4-thiazoline-2-thione and other thiocarbonyl heterocycles. The results are given in Table VIl-3. The major feature is the clean separation between the two highest MOs and the others. The highest MO of tt symmetry 17.74 eV) is essentially localized on the dithiocarbamic part of the structure. The second one (8.12 eV) is highly localized on the exocyclic sulfur atom. This peculiaritv... 

The preparation of a series of transition metal complexes (Co. Ni. Pd. Pt, Ir. Au. Cu. Ag) with ambident anion (70) and phosphines as ligands has been reported recently (885). According to the infrared and NMR spectra the thiazoline-2-thione anion is bounded through the exocyclic sulfur atom to the metal. The copper and silver complexes have been found to be dimeric. 

Reactivity of A-4-thiazoline-2-thiones and derivatives involves four main possibilities nucleophilic reactivity of exocyclic sulfur atom or ring nitrogen, electrophilic reactivity of carbon 2 and electrophilic substitution on carbon 5. 

Nucleophilic reactivity of the sulfur atom has received most attention. When neutral or very acidic medium is used, the nucleophilic reactivity occurs through the exocyclic sulfur atom. Kinetic studies (110) measure this nucleophilicity- towards methyl iodide for various 3-methyl-A-4-thiazoline-2-thiones. Rate constants are 200 times greater for these compounds than for the isomeric 2-(methylthio)thiazole. Thus 3-(2-pyridyl)-A-4-thiazoline-2-thione reacts at sulfur with methyl iodide (111). Methyl substitution on the ring doubles the rate constant. This high reactivity at sulfur means that, even when an amino (112, 113) or imino group (114) occupies the 5-position of the ring, alkylation takes place on sulfiu. For the same reason, 2-acetonyi derivatives are sometimes observed as by-products in the heterocyclization reaction of dithiocarba-mates with a-haloketones (115, 116). 

The sulfur atom stabilizes a-carbanions this has been used in the thiazole series to give a new synthetic pathway for various hydrocarbons (113) (Scheme 57) (281). 

Tautomerism of the A-2-thiazoline-5-thiones has not been investigated intensively. A recent report shows that 2-phenylthiazo e-5-thiols exist in the thiol form in both polar and nonpolar solvents (563). This behavior is in contrast with that of corresponding thiazolones. Addition reactions involve only the exocyclic sulfur atom, and thiazole-5-thiols behave as typical heteroaromatic thiols towards unsaturated systems, giving sulfides (1533) (Scheme 80) (563),... 

The mobility of the proton in position 2 of a quaternized molecule and the kinetics of exchange with deuterium has been studied extensively (18-20) it is increased in a basic medium (21-23). The rate of exchange is close to that obtained with the base itself, and the protonated form is supposed to be the active intermediate (236, 664). The remarkable lability of 2-H has been ascribed to a number of factors, including a possible stabilizing resonance effect with contributions of both carbene and ylid structure. This latter may result from the interaction of a d orbital at the sulfur atom with the cr orbital out of the ring at C-2 (21). 

The delocalization could be higher through the sulfur atom in the case of a substituent in position 5 (112). 

In 1874, Volhard (39) showed that thiohydantoin resisted desulfuration, proving its sulfur atom to be more firmly bonded than formula 34 indicated. 

The formation of a sulfur-containing ring was justified by the attack of the halogenated carbon of the cMoroacetyl derivative by the sulfur atom of thiourea, a fact in accordance with the results just discussed by Wallach (49,50) and Claus (51). The new formula (37) of thiohydantoine explained why, contrary to thiourea, its desulfuration was difficult. 

In 1888, Foerster (91), reproducing the same reaction with dianisyl-thiourea, demonstrated that the compound he obtained (59) could lose a sulfur atom by reduction with tin and hydrochloric acid to form a product analogous to N-phenylpiperidine (60). 

In 1882, Nencki and Sieber (98), condensing dibromopyruvic acid with thiourea, obtained a compound they named sulfuvinuric acid (Sulfuvinursaure), which was later demonstrated (99) to be a derivative of 2-aminothiazole. The same year Will (100) observed that the sulfur atom of 56 is masked to Pb(N03)2 and to alkalis. 

A clear decrease of a net charge at the sulfur atom, whereas the -TT-electronic density remains stationary. 

Summarizing, the introduction of nitrogen at the place of C-3 in thiophene does not deeply disturb the electronic environment of the sulfur atom, but it induces in the rest of the molecule some alternating modification of the electronic density (Figs. 1-3 and 1-4). The perturbations induced by the nitrogen in the tt bond order of thiophene are... 

A naturally occurring sulfonium salt S adenosylmethionme (SAM) is a key sub stance in certain biological processes It is formed by a nucleophilic substitution m which the sulfur atom of methionine attacks the primary carbon of adenosine triphosphate dis placing the triphosphate leaving group as shown m Figure 16 7... 

Section 20 13 Thioesters undergo reactions analogous to those of esters but at faster rates A sulfur atom stabilizes a carbonyl group less effectively than an oxygen... 

A major advance was devised by Pehr Edman (University of Lund Sweden) that has become the standard method for N terminal residue analysis The Edman degrada tion IS based on the chemistry shown m Figure 27 12 A peptide reacts with phenyl iso thiocyanate to give a phenylthwcarbamoyl (PTC) denvative as shown m the first step This PTC derivative is then treated with an acid m an anhydrous medium (Edman used mtromethane saturated with hydrogen chloride) to cleave the amide bond between the N terminal ammo acid and the remainder of the peptide No other peptide bonds are cleaved m this step as amide bond hydrolysis requires water When the PTC derivative IS treated with acid m an anhydrous medium the sulfur atom of the C=S unit acts as... 

Disulfide bridge (Section 27 7) An S—S bond between the sulfur atoms of two cysteine residues in a peptide or pro tein... 

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