Enzyme solution specific activity

Enzyme immobilization on a hydrophobin layer does not appear to significantly decrease enzyme properties, and these enzymes display similar substrate affinity to free enzymes. The specific activity of these enzymes may be lower than enzymes that are free in solution, but the immobilized enzymes also have the advantage of increased stability from 1 to 3 months (HRP and GOX, respectively). 

The class I FruA isolated from rabbit muscle aldolase (RAMA) is the aldolase employed for preparative synthesis in the widest sense, owing to its commercial availability and useful specific activity of 20 U mg . Its operative stability in solution is limiting, but the more robust homologous enzyme from Staphylococcus carnosus has been cloned for overexpression [87], which offers unusual stability for synthetic purposes. Recently, it was shown that less polar substrates may be converted as highly concentrated water-in-oil emulsions [88]. 

Pectin lyase (PNL) activity was measured spectrophotometrically by the increase in absorbance at 235 nm of the 4,5-unsaturated reaction products. Reaction mixtures containing 0.25 ml of culture filtrate, 0.25 ml of distilled water and 2.0 ml of 0.24% pectin from apple (Fluka) in 0.05M tris-HCl buffer (pH 8.0) with ImM CaCl2, were incubated at 37 C for 10 minutes. One unit of enzyme is defined as the amount of enzyme which forms Ipmol of 4,5-unsaturated product per minute under the conditions of the assay. The molar extinction coefficients of the unsaturated products is 5550 M cm [25]. Also viscosity measurements were made using Cannon-Fenske viscometers or Ostwald micro-viscosimeter, at 37°C. Reaction mixtures consisted of enzyme solution and 0.75% pectin in 0.05 M tris-HCl buffer (pH 8.0) with 0.5 mM CaCl2. One unit is defined as the amount of enzyme required to change the inverse specific viscosity by 0.001 min under the conditions of reaction. Specific viscosity (n p) is (t/to)-l, where t is the flow time (sec) of the reaction mixture and t is the flow time of the buffer. The inverse pecific viscosity (n p ) is proportional to the incubation time and the amount of enzyme used [26]. Units of enzyme activity were determined for 10 min of reaction. 

Inhibitor assay A suitable amount of inhibitor was preincubated with 0.2 ml of polygalacturonase and buffer in a total volume of 1 ml for 10 minutes at 37°C. Control without inhibitor was run simultaneously. The enzyme reaction was initiated by the addition of 1 ml of substrate solution (1% polygalacturonic acid). The decrease in PG activity was a measure of the inhibitory activity. Proper controls containing only Dieffenbachia extract and no fungal PG in the assay mixture were also run to account for the inherent PG activity, if any, of Dieffenbachia extract. One unit of inhibitor activity is defined as the amount of inhibitor that reduces the polygalacturonase activity under the assay conditions by one unit. Specific activity of the inhibitor is expressed as units per mg protein. 

Enzyme containing Nation membranes prepared according to the proposed protocol have shown high specific activity and stability of immobilized glucose oxidase. As expected, the simplicity of preparation provided high reproducibility. When the same casting solution is used, the maximum deviation in membrane activity is <2%. This, however, is also the precision limit for kinetic investigations. 

Another cultured cell line of Catharanthus roseus (EU4A), which does not produce detectable amounts of vinblastine and other bisindole alkaloids, was also examined for its ability to transform 78 (183). Cell-free extracts of the culture line were prepared, and the 35,000 X g supernatant solution was used. Incubations with 2r-tritioanhydiovinblastine yielded a mixture from which radioactive vinblastine (52) was isolated. The labeled vinblastine was reisolated after unlabeled carrier was added and rigorously purified by successive thin-layer chromatography, reversed-phase HPLC, and crystallization to constant specific activity. Boiled extracts could not produce labeled 52, thus supporting the involvement of enzymes in the conversion process. 

The cell-bound amylopullulanase was solubilized with detergent and lipase. It was then purified to homogeneity by treatment with streptomycin sulfate and ammonium sulfate, and by DEAE-Sephacel, octyl-Sepharose and puUulan-Sepharose column chromatography (12). The final enzyme solution was purified 3511-fold over the crude enzyme extract with an overall recovery of 42% and had a specific activity of 481 units/mg protein. The average molecular weight of the enzyme was 136,500 determined by gel filtration on Sephacryl S-200 and SDS-PAGE, and it had an isoelectric point at pH 5.9. It was rich in acidic and hydrophobic amino acids. The purified enzyme was quite thermostable in the absence of substrate even up to 90°C with essentially no loss of activity in 30 min. However, the enzyme lost about 40% of its original activity at 95 C tested for 30 min. The optimum tenq)erature for the action of the purified enzyme on pullulan was 90°C. However, the enzyme activity rapidly decreased on incubation at 95°C to only 38% of the maximal 30 min. The enzyme was stable at pH 3.0-5.0 and was optimally active at pH 5.5. It produced only maltotriose and no panose or isopanose from pullulan. 

With respect to an enzyme, the rate of substrate-to-product conversion catalyzed by an enzyme under a given set of conditions, either measured by the amount of substance (e.g., micromoles) converted per unit time or by concentration change (e.g., millimolarity) per unit time. See Specific Activity Turnover Number. 2. Referring to the measure of a property of a biomolecule, pharmaceutical, procedure, eta, with respect to the response that substance or procedure produces. 3. See Optical Activity. 4. The amount of radioactive substance (or number of atoms) that disintegrates per unit time. See Specific Activity. 5. A unitless thermodynamic parameter which is used in place of concentration to correct for nonideality of gases or of solutions. The absolute activity of a substance B, symbolized by Ab, is related to the chemical potential of B (symbolized by /jlb) by the relationship yu,B = RTln Ab where R is the universal gas constant and Tis the absolute temperature. The ratio of the absolute activity of some substance B to some absolute activity for some reference state, A , is referred to as the relative activity (usually simply called activity ). The relative activity is symbolized by a and is defined by the relationship b = Ab/A = If... 

Zinc proteases carboxypeptidase A and thermolysin have been extensively studied in solution and in the crystal (for reviews, see Matthews, 1988 Christianson and Lipscomb, 1989). Both carboxypeptidase A and thermolysin hydrolyze the amide bond of polypeptide substrates, and each enzyme displays specificity toward substrates with large hydrophobic Pi side chains such as phenylalanine or leucine. The exopeptidase carboxypeptidase A has a molecular weight of about 35K and the structure of the native enzyme has been determined at 1.54 A resolution (Rees et ai, 1983). Residues in the active site which are important for catalysis are Glu-270, Arg-127, (liganded by His-69, His-196, and Glu-72 in bidentate fashion), and the zinc-bound water molecule (Fig. 30). 

By international agreement, 1.0 unit of enzyme activity is defined as the amount of enzyme causing transformation of 1.0 gmol of substrate per minute at 25 °C under optimal conditions of measurement. The term activity refers to the total units of enzyme in a solution. The specific activity is the number of enzyme units per milligram of total protein (Fig. 3-23). The specific activity is a measure of enzyme purity it increases during purification of an enzyme and becomes maximal and constant when the enzyme is pure (Table 3-5). 

After each purification step, the activity of the preparation (in units of enzyme activity) is assayed, the total amount of protein is determined independently, and the ratio of the two gives the specific activity. Activity and total protein generally decrease with each step. Activity decreases because some loss always occurs due to inactivation or nonideal interactions with chromatographic materials or other molecules in the solution. Total protein decreases because the objective is to remove as much unwanted or nonspecific protein as possible. In a successful step, the loss of nonspecific protein is much greater than the loss of activity therefore, specific activity increases even as total activity falls. The data are then assembled in a purification table similar to Table 3-5. A protein is generally considered pure... 

An enzyme circumvents these problems by providing a specific environment within which a given reaction can occur more rapidly. The distinguishing feature of an enzyme-catalyzed reaction is that it takes place within the confines of a pocket on the enzyme called the active site (Fig. 6-1). The molecule that is bound in the active site and acted upon by the enzyme is called the substrate. The surface of the active site is lined with amino acid residues with substituent groups that bind the substrate and catalyze its chemical transformation. Often, the active site encloses a substrate, sequestering it completely from solution. The enzyme-... 

The actual molar concentration of an enzyme in a cell-free extract or purified preparation is seldom known. Only if the enzyme is available in a pure crystalline form, carefully weighed, and dissolved in a solvent can the actual molar concentration be accurately known. It is, however, possible to develop a precise and accurate assay for enzyme activity. Consequently, the amount of a specific enzyme present in solution is most often expressed in units of activity. Three units are in common use, the international unit (IU), the katal, and specific activity. The International Union of Biochemistry Commission on Enzymes has recommended the use of a standard unit, the international unit, or just unit, of enzyme activity. One IU of enzyme corresponds to the amount that catalyzes the transformation of 1 p,mole of substrate to product per minute under specified conditions of pH, temperature, ionic strength, and substrate concentration. If a solution containing... 

Another useful quantitative definition of enzyme efficiency is specific activity. The specific activity of an enzyme is the number of enzyme units or katals per milligram of protein. This is a measure of the purity of an enzyme. If a solution contains 20 mg of protein that express 2 units of activity (33 nkatals), the specific activity of the enzyme is 2 units/20 mg = 0.1 units/mg or 33 nkatals/20 mg = 1.65 nkatals/mg. As an enzyme is purified, its specific activity increases. That is, during purification, the enzyme concentration increases relative to the total protein concentration until a limit is reached. The maximum specific activity is attained when the enzyme is homogeneous or in a pure form. 

In order to determine the specific activity of the enzyme, the exact concentration of the enzyme must be known. The concentration of the solution of tyrosinase may be determined as a class project by the following procedure. Turn on the spectrophotometer and the UV lamp. Adjust the wavelength to 280 nm. Allow the instrument and lamp to warm up for 15 to 20 minutes. Transfer 1.0 or 3.0 mL of the phosphate buffer to a 1- or 3-mL quartz cuvette. Place it in the sample position of the spectrophotometer and adjust the balance to zero absorbance. Discard the buffer, and clean and dry the cuvette. Transfer 1.0 or 3.0 mL of the tyrosinase solution into the quartz cuvette. Place in the sample position and record the absorbance at 280 nm. Calculate the tyrosinase concentration as described in the Analysis of Results section. 

B 10. You are required to assay a solution of purified malate dehydrogenase (specific activity = 1.0). What A d34Q/min will you observe if you use 1 mg of enzyme in a 3-mL assay as described in part D of this experiment ... 

---