Divalent cations structure

Bujacz, G., Jaskolski, M., Alexandratos, J., Wlodawer, A., Merkel, G., Katz, R. A., and Skalka, A. M. (1996). The catalytic domain of avian sarcoma virus integrase conformation of the active-site residues in the presence of divalent cations. Structure 4, 89-96. Kulkosky, J., Katz, R. A., Merkel, G., and Skalka, A. M. (1995). Activities and substrate specificity of the evolutionarily conserved central domain of retroviral integrase. Virology 206, 448-456,... 

Monochalcogenides, LnZ (Z = S, Se, Te), have been prepared for all the lanthanides except Pm, mostly by direct combination.They are almost black and, like the monoxides, have the NaCl structure. However, with the exceptions of SmZ, EuZ, YbZ, TmSe and TmTe, they have metallic conductivity and evidently consist of Ln -t- Z ions with 1 electron from each cation delocalized in a conduction band. EuZ and YbZ, by contrast, are semiconductors or insulators with genuinely divalent cations, but SmZ seem to be intermediate and may involve the equilibrium ... 

Some microbial exopolysaccharides contain the inorganic substituents phosphate and sulphate. Phosphate has been found in exopolysaccharide from bacteria of medical importance, including Escherichia coli. Sulphate is far less common than phosphate and has only been found in spedes of cyanobaderia. In addition to these inorganic components, which form part of the structure of some exopolysaccharides, all polyanionic polymers will bind a mixture of cations. Exopolysaccharides are, therefore, purified in the salt form. The strength of binding of the various cations depend on the exopolysaccharide some bind the divalent cations calrium, barium and strontium very strongly, whereas others prefer certain monovalent cations, eg Na ... 

The most intensively investigated dehydroxylation is probably the reaction of Mg(OH)2, though detailed results are also available for the hydroxides of certain other divalent cations. Several summaries of the mechanistic deductions obtained from such work, including literature sources, were presented at a conference at Dijon in 1974 [87]. The extensive literature concerned with the thermal analysis of hydroxides has been reviewed by Dollimore [79] who has also included the behaviour of oxides. Water elimination can be regarded as the first in a sequence of structurally related steps through which the hydroxide is converted into the thermally most stable oxide. 

The results from such occluders show that Na channels differ in structure between their internal and external surfaces, have binding sites for a variety of monovalent and divalent cations, and are pharmacologically different despite very similar physiological actions in nerve, muscle, and mammalian cardiac cells. 

Vaterite is thermodynamically most unstable in the three crystal structures. Vaterite, however, is expected to be used in various purposes, because it has some features such as high specific surface area, high solubility, high dispersion, and small specific gravity compared with the other two crystal systems. Spherical vaterite crystals have already been reported in the presence of divalent cations [33], a surfactant [bis(2-ethylhexyl)sodium sulfate (AOT)] [32], poly(styrene-sulfonate) [34], poly(vinylalcohol) [13], and double-hydrophilic block copolymers [31]. The control of the particle size of spherical vaterite should be important for application as pigments, fillers and dentifrice. 

Some divalent cations such as Cu and Pb form very stable complexes with pectate, but are unlikely to be present at sufiScient concentration in the apoplast of plants to form a major fraction of the counterions associated with the pectic fraction in vivo. The Al ion may deserve closer examination, as it is certainly able to displace Ca from cell walls and reaches substantial concentrations in plant roots under some conditions [60,61]. aluminium is not usually considered to be freely translocated, however. Basic peptides with their negative charges spaced at a similar interval to galacturonans (0.43 nm or a small multiple thereof) can in principle have a very high afiBnity for pectate [62,63], but the extensins that are associated with the most insoluble pectic fractions [M] do not appear to have this type of structure. The possibility that the non-extractable pectic polymers in most cell walls are very strongly complexed with some cation other than Ca " cannot be ruled out, but there is little evidence to support it at present. 

The ratio of the two forms depends on the cation as well as on a. Ba has a greater tendency to make linkages of the COO-Me-OOC type than Mg and this difference is accentuated when the density of COO" in the polyanion is low. Thus, at a = 025 more Ba ions are in the COO-Ba-OOC form than in the COO-Ba form, while the reverse is true for Mg ions. Moreover, the structure COO-Mg is more stable and soluble than COO-Ba because Mg is more hydrophilic than Ba. For these reasons, Ba is precipitated at a = 0-25 while Mg is not. This interpretation is supported by titration experiments in the presence of divalent cations (Jacobsen, 1962). Magnesium forms very stable hydrates and would be expected to be more difficult to desolvate. 

Cobaltites with spinel stractnre have compositions MC02O4, where M is a metal forming divalent cations, snch as zinc, cadminm, magnesinm, nickel, manganese, and divalent cobalt. In contrast to the perovskites, the cobaltites have a rather high catalytic activity already at room temperatnre. Experiments show that the activity increases with increasing spinel structure content (i.e., increasing number of Co ions) of the catalyst snrface. The trivalent cobalt ions promote the withdrawal of... 

Poly(dG-dC) poly(dG-dC) and its methylated analogue structures assume left-handed conformation (Z-DNA) in high molar sodium salt (Na", K" ), in low molar divalent cations (Ca", Mg", Ni ), micromolar concentrations of hexaamine cobalt chloride (Co(NH3)6)Cl3 and in millimolar concentrations of polyamines. In order to analyse the binding of berberine to Z-form DNA, Kumar et al. [186] reported that the Z-DNA structure of poly(dG-dC) poly(dG-dC) prepared in either a high salt concentration (4.0 M) or in 40 mM (Co(NH3)6)Cl3 remained invariant in the presence of berberine up to a nucleotide phosphate/alkaloid molar ratio of 0.8 and suggested that berberine neither bormd to Z-form DNA nor converted the Z-DNA to the... 

A number of substances have been discovered in the last thirty years with a macrocyclic structure (i.e. with ten or more ring members), polar ring interior and non-polar exterior. These substances form complexes with univalent (sometimes divalent) cations, especially with alkali metal ions, with a stability that is very dependent on the individual ionic sort. They mediate transport of ions through the lipid membranes of cells and cell organelles, whence the origin of the term ion-carrier (ionophore). They ion-specifically uncouple oxidative phosphorylation in mitochondria, which led to their discovery in the 1950s. This property is also connected with their antibiotic action. Furthermore, they produce a membrane potential on both thin lipid and thick membranes. 

Piquemal J-P, Perera L, Cisneros GA, Ren P, Pedersen LG, Darden TA (2006) Towards accurate solvation dynamics of divalent cations in water using the polarizable Amoeba force field from energetics to structure. J Chem Phys 125 054511... 

Fig. 5.5 (A) Alginate block copolymer structure with random sequences (B) divalent cations induced gelation of alginate (formation of egg-box structure).

The biochemical properties of these structures are known. Desmosomes display protease sensitivity, divalent cation dependency and osmotic insensitivity and their membranes are mainly of the smooth type. In direct contrast to desmosomes, the tight junctions as well as gap junctions and synapses display no protease sensitivity, divalent cation dependency or osmotic sensitivity, while their membranes are complex. These facts have been used in the development of techniques to isolate purified preparations of junctional complexes. 

Within each of these adhesion molecule families, membership has been defined largely by amino-acid sequence similarity, which is reflected in common structural features. Consequently, distinct binding requirements also characterize each family. For example, cadherins interact in a Ca2+-dependent, usually homophilic manner. Binding of the members of the Ig family is Ca2+-independent and, although frequently homophilic, can be heterophilic. Integrin binding is also divalent cation-dependent (Ca2+, Mg2+) but always heterophilic. 

Diffusion in the extrinsic region can readily be modified by doping, although knowledge of the mechanism by which the diffusion takes place is important if this is to be immediately successful. For example, sodium chloride structure materials that conduct by a vacancy mechanism can have the cation conductivity enhanced by doping with divalent cations, as these generate compensating cation vacancies. The inclusion of cadmium chloride into sodium chloride can be written ... 

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