Biogenic mechanisms

Kuga S. and Brown, Jr. R.M. 1989. Correlation between structure and the biogenic mechanisms of cellulose new insights based on recent electron microscopic findings. In Schuerch C. (ed.) Cellulose and wood-chemistry and technology. Wiley, New York, pp. 677-688. 

Dry Deposition. Dry deposition occurs in two steps the transport of pollutants to the earth s surface, and the physical and chemical interaction between the surface and the pollutant. The first is a fluid mechanical process (see Fluid mechanics), the second is primarily a chemical process, and neither is completely characterized at the present time. The problem is confounded by the interaction between the pollutants and biogenic surfaces where pollutant uptake is enhanced or retarded by plant activity that varies with time (47,48). It is very difficult to measure the depositional flux of pollutants from the atmosphere, though significant advances were made during the 1980s and early 1990s (49,50). 

The two prime mechanisms of carbon transport within the ocean are downward biogenic detrital rain from the photic zone to the deeper oceans and advection by ocean currents of dissolved carbon species. The detrital rain creates inhomogeneities of nutrients illustrated by the characteristic alkalinity profiles (Fig. 11-9). The amount of carbon leaving the photic zone as sinking particles should not be interpreted as the net primary production of the surface oceans since most of the organic carbon is recycled... 

Rudnick, G (1997) Mechanism of biogenic amine neurotransmitter transporters. In Neurotransmitter Transporters. Humana Press, New York, pp 1-28, 73-100. 

Figure 3 Putative model for the mechanism by which biogenic amines stimulate CE secretion across the rabbit corneal epithelium. Epn = epinephrine Nep = norepinephrine Tim = Timolol Ser = serotonin Msg = methysergide Dop = dopamine Hal = haloperi-dol (E = (E-adrenoceptor AC = adenylate cyclase. The scheme is consistent with the observation that epithelial responsiveness to serotonin and dopamine can be blocked by their receptor antagonists haloperidol and methysergide, respectively, and by both timolol treatment and sympathectomy. The probable source of serotonin or dopamine is the sympathetic fibers that innervate the cornea. (From Ref. 284.)...

Anaerobic bio-reduction of azo dye is a nonspecific and presumably extracellular process and comprises of three different mechanisms by researchers (Fig. 1), including the direct enzymatic reduction, indirect/mediated reduction, and chemical reduction. A direct enzymatic reaction or a mediated/indirect reaction is catalyzed by biologically regenerated enzyme cofactors or other electron carriers. Moreover, azo dye chemical reduction can result from purely chemical reactions with biogenic bulk reductants like sulfide. These azo dye reduction mechanisms have been shown to be greatly accelerated by the addition of many redox-mediating compounds, such as anthraquinone-sulfonate (AQS) and anthraquinone-disulfonate (AQDS) [13-15],... 

Rudnick, G. (1997) Mechanisms of biogenic amine neurotransporters, in Neurotransmitter Transporters Structure, Function, and Regulation 1st ed. (Reith, M. E. A., ed.), Humana Press, Totowa, NJ, pp. 73-100. 

The biogenic amines are the preferred substrates of MAO. The enzyme comes in two flavors, MAO-A and MAO-B, both of which, like FMO, rely on the redox properties of FAD for their oxidative machinery. The two isoforms share a sequence homology of approximately 70% (81) and are found in the outer mitochondrial membrane, but they differ in substrate selectivity and tissue distribution. In mammalian tissues MAO-A is located primarily in the placenta, gut, and liver, while MAO-B is predominant in the brain, liver, and platelets. MAO-A is selective for serotonin and norepinephrine and is selectively inhibited by the mechanism-based inhibitor clorgyline (82). MAO-B is selective for /1-phcncthylaminc and tryptamine, and it is selectively inhibited by the mechanism-based inhibitors, deprenyl and pargyline (82) (Fig. 4.32). Recently, both MAO-A (83) and MAO-B (84) were structurally characterized by x-ray crystallography. 

Credible mechanisms have been identified for the extraterrestrial production and delivery to early Earth of organic molecules and amino adds containing a small e.e. The subsequent terrestrial sequestration of an initial e.e. and its amplification into dominance are processes for which biogenically credible mechanisms exist. The... 

Cindy Lee is a Professor at the Marine Sciences Research Center of Stony Brook University. Dr. Lee s research examines the distribution and behavior of biogenic organic compounds, in particular the rates and mechanisms of transformation reactions occurring as these compounds undergo alteration. Her research investigates organic compounds in the sediments and waters of open ocean and coastal areas, salt marshes, lakes, as well as the atmosphere above these areas. Her expertise centers on the analytical techniques used to measure organic matter in the ocean. Dr. Lee is cur-... 

From a geochemical perspective, sinking POM is an important mechanism by which carbon and other elements are transferred from the sea surfece into the deep sea and onto the sediments. This transport is termed the biological pump and includes the sinking of inorganic particles that are of biogenic origin, namely calcium carbonate and silicate shells. 

Serendipity has played a major role in the discovery of most classes of psychotropic drugs. For example, the observation that the first antidepressants, the tricyclic antidepressants and the monoamine oxidase inhibitors, impeded the reuptake of biogenic amines into brain slices, or inhibited their metabolism, following their acute administration to rats, provided the experimenter with a mechanism that could be easily investigated in vitro. Such methods led to the development of numerous antidepressants that differed in their potency, and to some extent in their side effects (for example, the selective serotonin reuptake inhibitors) but did little to further the development of novel antidepressants showing greater therapeutic efficacy. The accidental discovery of atypical antidepressants such as mianserin led to the broadening of the basis of the animal models... 

Other plants known to contain psychoactive compounds include hellebore, which was used for centuries in Europe to treat mania, violent temper, mental retardation and epilepsy. However, a drug of major importance in modern psychopharmacology arose from the discovery by medicinal chemists of the alkaloids of Rauwolfia serpentina, a root which had been used in the Indian subcontinent for centuries, not only for the treatment of snake bite but also for alleviating "insanity". Understandably, the mechanism of action of reserpine, the alkaloid purified from Rauwolfia serpentina, helped to lay the basis to psychopharmacology by demonstrating how the depletion of central and peripheral stores of biogenic amines was correlated with a reduction in blood pressure and tranquillization. 

The mechanism of action of neuroleptics is not sufficiently clear. However, it is believed that they are antagonists of dopamine and dopaminomimetics, and that their effect is connected in some way with the blockage of dopamine D receptors, which results in changes of behavioral reactions. Moreover, it is possible that they also block action on the serotonin receptors and M-choline receptors. It also is possible that antipsychotic agents disrupt the process of the release and return neuronal uptake of a number of biogenic amines. 

Despite the fact that the initial biochemical abnormalities responsible for depression and manic-depressive conditions have not been completely discovered, some facts suggest that depressive conditions may be caused by a lack of norepinephrine (noradrenaline) and serotonin. The majority of drugs used in treatment of such illnesses act by affecting the system of biogenic amines of the brain, thus leading to action of a mechanism that is capable of increasing their contents in respective parts of the brain. 

Imipramine is the primary representative of typical tricyclic antidepressants. It acts by blocking the mechanism of renptake of biogenic amines. It does not inhibit MAO activity. Imipramine lessens sadness, lethargy, improves mood, and improves the mental and overall tone of the body. It is nsed in depression of varions etiology accompanied by motor cinmsiness and ennresis in children and Parkinson s disease. Primary synonyms of this drag are tofranil, snrplix, imizin, melipramin, and others. 

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