Substrate preference

MAO is known to occur in at least two forms, MAO A and MAO B, based on substrate selectivity, inhibition by various dmgs, and cloning experiments. Clorgyline [17780-72-2] is a specific inhibitor of MAO A, which displays a substrate specificity for NE and serotonin. Deprenyl [2323-36-6] is a selective inhibitor of MAO B, and displays a substrate preference for P-phenylethylamine and benzyl amine. Dopamine and tyramine are substrates for both enzymes. 

How would substrate preference be changed if the glycine residues in trypsin at positions 216 and 226 were changed to alanine rather than to the more bulky valine and threonine groups that are present in elastase This question was addressed by the groups of Charles Cralk, William Rutter, and Robert Fletterick in San Francisco, who have made and studied three such trypsin mutants one in which Ala is substituted for Gly at 216, one in which the same substitution is made at Gly 226, and a third containing both substitutions. 

Mutations in the specificity pocket of trypsin, designed to change the substrate preference of the enzyme, also have drastic effects on the catalytic rate. These mutants demonstrate that the substrate specificity of an enzyme and its catalytic rate enhancement are tightly linked to each other because both are affected by the difference in binding strength between the transition state of the substrate and its normal state. 

P-Lactamases are enzymes that hydrolyze the P-lactam ring of P-lactamantibiotics (penicillins, cephalosporins, monobactams and carbapenems). They are the most common cause of P-lactam resistance. Most enzymes use a serine residue in the active site that attacks the P-lactam-amid carbonyl group. The covalently formed acylester is then hydrolyzed to reactivate the P-lacta-mase and liberates the inactivated antibiotic. Metallo P-lactamases use Zn(II) bound water for hydrolysis of the P-lactam bond. P-Lactamases constitute a heterogeneous group of enzymes with differences in molecular structures, in substrate preferences and in the genetic localizations of the encoding gene (Table 1). 

Iron porphyrins display pronounced substrate preferences for alkene cyclopro-panation with EDA. In general, electron-rich terminal alkenes in conjunction with aromatic moiety or heteroatoms can efficiently undergo cyclopropanation with high catalyst turnover and selectivity. In contrast, 1,2-disubstituted alkenes cannot undergo cyclopropanation with diazoesters. Alkyl alkenes are poor substrates, giving cyclopropanated products in low yields. In both cases, the dimerization product diethyl maleate was obtained in high yield [53]. 

The r2 isolate of Fusarium oxysporum f. sp. radicis-lycopersici (FORL) produced several pectic enzymes that differ in substrate preference, reaction mechanism, and action pattern. We have detected three forms that have lyase activity, an absolute requirement for calcium, and pis of 9.20, 9.00 and 8.65. The two most alkaline forms had a weak preference for pectin whereas the other was more active on pectate. The three lyases were produced when the fungus grew on pectin and on restricted galacturonic acid (data presented in the "XV Congreso Nacional de Microbiologia" [21] and sent for publication). 

Kasai Y, K Shindo, S Harayama, N Misawa (2003) Molecular characterization and substrate preference of a polycyclic aromatic hydrocarbon dioxygenase from Cycloclasticus sp. strain A5. Appl Environ Microbiol 69 6688-6697. 

The regioselectivity of the hydroformylation of alkenes is a function of many factors. These include inherent substrate preferences, directing effects exerted by functional groups as part of the substrate, as well as catalyst effects. In order to appreciate substrate inherent regioselectivity trends, alkenes have to be classified according to the number and nature of their substitution pattern (Scheme 3) [4]. 

A novel nitrilase was purified from Aspergillus niger K10 cultivated on 2-cyanopyridine. It was found to be homologous to a putative nitrilase from Aspergillus fumigatus Af293. The nitrilase exhibited maximum activity at 45 °C and pH 8.0 with much less activity observed at slightly acid pH. Its substrate preference was for 4-cyanopyridine, benzonitrile, 1,4-dicyanobenzene, thio-phen-2-acetonitrile, 3-chlorobenzonitrile, 3-cyanopyridine, and 4-chlorobenzonitrile. ( )-2-Phenylpropionitrile was only poorly converted by this enzyme and with minimal enantioselectivity. The enzyme was shown to be multimeric (>650 kDa) and be stabilized in the presence of sorbitol and xylitol [57]. 

A follow up paper reported on the substrate preference of the strain ECRD-1 [86], Two different diesel oils were studied LCCO (light catalytic-cycle oil), which is heavily hydrotreated and OB oil, (not treated by HDS). Sulfur molecules ranging from Cl to C4 DBTs and C2-C7 BTs were identified in the oils and assessed before and after treatment (Fig. 15). 

Prince, R. C., and Grossman, M. J., Substrate Preferences in Biodesulfurization of Diesel Range Fuels by Rhodococcus Sp Strain ECRD-1. Applied and Environmental Microbiology, 2003. 69(10) pp. 5833-5838. 

CHRISTENSEN, A.B., GREGERSEN, P.L., SCHRODER, J., COLLINGE, D.B., A chalcone synthase with an unusual substrate preference is expressed in barley leaves in response to UV light and pathogen attack, Plant Mol. Biol., 1998,37, 849-857. 

Hg concentrations in forest soils, mosses and fungal fruiting bodies are variable, and are influenced by many factors, such as the extent of forest-based capture of atmospheric Hg deposition, transmission of Hg from the forest canopy to the litter layer whether covered with mosses or not, and type of moss and soil layer conditions and configurations. Within the fungal fruiting bodies, further alternation of the Hg cycle occurs on account of mycelia substrate preferences and Hg allocation to stalk and caps, according to developmental stage. 

As discussed above, proteases are peptide bond hydrolases and act as catalysts in this reaction. Consequently, as catalysts they also have the potential to catalyze the reverse reaction, the formation of a peptide bond. Peptide synthesis with proteases can occur via one of two routes either in an equilibrium controlled or a kinetically controlled manner 60). In the kinetically controlled process, the enzyme acts as a transferase. The protease catalyzes the transfer of an acyl group to a nucleophile. This requires an activated substrate preferably in the form of an ester and a protected P carboxyl group. This process occurs through an acyl covalent intermediate. Hence, for kineticmly controlled reactions the eii me must go through an acyl intermediate in its mechanism and thus only serine and cysteine proteases are of use. In equilibrium controlled synthesis, the enzyme serves omy to expedite the rate at which the equilibrium is reached, however, the position of the equilibrium is unaffected by the protease. 

The direction that development of these islands will take is unclear at the present time because of the political situation. Ciguatera is not a severe problem in the Line Islands, but it is one that must be kept in mind as development schemes are implemented, not only because of the increased population dependent on the abundant marine resource, but because of the reef modification that may take place. At the present time, the government is planning to blast a channel through the reef at the new village site on Christmas Island. This could provide yet another valuable natural experiment. Turbinaria, one of the macroalgal substrates preferred G. toxicus is abundant at the site. 

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