Supports, in combinatorial chemistry

The Mannich reaction is a three component reaction in which an imine, that was formed from the condensation of an amine with an aldehyde, reacts with a component containing at least one hydrogen atom of pronounced reactivity. It is possible to immobilize every Mannich partner on sohd supports. In combinatorial chemistry the Mannich reaction has been used for the generation of different h-braries (Scheme 3.26). 

The use of dendrimers as soluble supports in combinatorial chemistry was recently introduced by Kim et al. [204] for the synthesis of a 27-member pool library of indoles (three pools by nine individuals). The structure of the dendritic support, which was prepared condensing the commercially available starburst polyamidoamine (PAMAM) dendrimer with the 4-hydroxymethyl benzoic acid (HMB) linker, is given in Figure 7.24. 

Recently, a solid-phase synthesis was used iteratively for the synthesis of organic substances like oligocarbamates [13] and oligoureas [14] by repeated coupling to amino-functionalized supports. In this way substance libraries [15] have been developed showing that iterative methods can also be employed in combinatorial chemistry [16]. 

Kobayashi, S. Combinatorial Library Synthesis Using Polymer-supported Catalysts. In Combinatorial Chemistry, Fenniri, H., Ed., Oxford University Press Oxford, U.K., 2000 pp 421-432. 

One of the key technologies used in combinatorial chemistry is solid-phase organic synthesis (SPOS) [2], originally developed by Merrifield in 1963 for the synthesis of peptides [3]. In SPOS, a molecule (scaffold) is attached to a solid support, for example a polymer resin (Fig. 7.1). In general, resins are insoluble base polymers with a linker molecule attached. Often, spacers are included to reduce steric hindrance by the bulk of the resin. Linkers, on the other hand, are functional moieties, which allow the attachment and cleavage of scaffolds under controlled conditions. Subsequent chemistry is then carried out on the molecule attached to the support until, at the end of the often multistep synthesis, the desired molecule is released from the support. 

The use of polymer-supported reagents in combinatorial chemistry has received much attention in recent years, and a polymer-supported acylating reagent (supported on a ROMPGEL) has been used for the synthesis of 1,2,4-oxadiazoles in solution, (see Equation 37), <2000CCHT131>. 

ATR FT-IR spectroscopy has also been employed to monitor the solid-phase synthesis of substituted benzopyranoisoxazoles [180]. Finally, Huber et al. [181] have also reported that this technique is particularly suitable for the characterization of supported molecules in combinatorial chemistry, as well as for the identification of side products and for Photoacoustic (PA) FT-IR. 

In general, organic chemistry on polymeric supports, which is the major tool in combinatorial chemistry with the implementation of organic compounds, can be divided into three parts the polymeric support, often a polystyrene resin the product, and the linker which enables a suitable connection between the two parts (Fig. 3.1) [5]. 

The use of polymer-supported synthesis in combinatorial chemistry has become increasingly important in drug discovery [15]. Therefore, an efficient synthetic... 

Xu, W. Mohan, R. Morrissey, M. M. Polymer-Supported Bases in Combinatorial Chemistry Synthesis of Aryl Ethers from Phenols and Alkyl Halides and Aryl Halides, Tetrahedron Lett. 1997, 38, 7337. 

Solid-phase synthesis is of importance in combinatorial chemistry. As already mentioned RuH2(PPh3)4 catalyst can be used as an alternative to the conventional Lewis acid or base catalyst. When one uses polymer-supported cyanoacetate 37, which can be readily obtained from the commercially available polystyrene Wang resin and cyanoacetic acid, the ruthenium-catalyzed Knoevenagel and Michael reactions can be performed successively [27]. The effectiveness of this reaction is demonstrated by the sequential four-component reaction on solid phase as shown in Scheme 11 [27]. The ruthenium-catalyzed condensation of 37 with propanal and subsequent addition of diethyl malonate and methyl vinyl ketone in TH F at 50 °C gave the adduct 40 diastereoselectively in 40 % yield (de= 90 10). 

A complementary approach is afforded by the option to use reagents attached to suitable supports to allow the easy removal of excess or derived products. A useful review of this field was published in 1981 and recent advances in combinatorial chemistry have prompted a revival of interest [24],... 

The advantages of heterogeneous solid phase in combinatorial chemistry, especially in terms of purification procedures, can be obtained also by solution-phase chemistry, using solid support assistance. The resin performs a specific function during the library synthesis and then is simply removed by filtration, leaving the pure library components in solution. A well-known adapted technique uses solid supported reagents or catalysts during a combinatorial synthesis, where the solid phase is filtered off and discarded after the reaction in which it was involved. A new application is represented by solid-phase purification, where one or more solid supports are added to trap the excess of... 

Xu W, Mohan R, Morrissey MM, Polymer supported bases in combinatorial chemistry synthesis of aryl ethers from phenols and alkyl halides and aryl halides, Tetrahedron Lett., 38 7337-7340, 1997. 

Yamashita and Weinstock [62], Scott et al. [63, 64] and Egner et al. [65] reported the use of fluorophores in combinatorial chemistry and, in particular, as tags for pool library encoding. Multiple fluorophores were pre-encoded at a very low loading level (>0.1%) and the codes were read via various fluorimetric detection techniques [63]. Small tripeptide libraries were tested and decoded with success [62], but many potential drawbacks were also highlighted [63] so that a careful assessment of all the relevant variables (solid support... 

While considerable efforts have been spent in the past few years in the field of solid supports for combinatorial chemistry [73], most of them were devoted to modified polystyrenic beads with different sizes, loadings or swelling properties [74], or carrying different functionalities or linkers for library synthesis [75], or to solid supports different from resin beads (pins [76], cellulose [77], soluble supports [78], and so on). Few reports dealt with labelled solid supports prepared by chemical reactions (see the previous paragraphs) and significant efforts in the field of material sciences to obtain intrinsically labeled, nonchemically encoded, easily readable, combinatorial solid supports have not been reported. 

Early reported applications of this technique were the preparation of a 24-member peptide library [83], of a 125-member tripeptide-substituted cinnamic acid library tested for inhibition of tyrosine phosphatase PTP1B [83], of a 64-member peptide-like library [83] and of libraries based on a natural product, epothilone, using also new polystyrene grafted solid supports [84], Other applications, ranging from l,5-benzodiazepin-2-one library synthesis [85] to chalcone library synthesis [86], were also recently reported. Commercialization of the basic components for this technique [87] (reaction supports and vessels, tags, software, sorters, reaction stations, and so on) will ensure its quick and effective use in combinatorial chemistry and also the implementation of new technical features and possibilities for more complex and demanding applications in future. 

Undoubtedly, NMR is the most informative method for characterization of organic compounds. However, it has limited application in combinatorial chemistry due to several factors. NMR is a relatively insensitive and slow method, requires homogeneous samples, and consumes quite expensive deuterated solvents. Here we will discuss the most recent developments of this method that overcome the major limitations and make NMR one of the promising techniques in combinatorial chemistry. It relates to the application of NMR, not only for analyzing compounds attached to polymer support and for monitoring reactions on a solid phase, but also as a detector for liquid chromatography (LC/NMR). For the most recent review, see [10]. 

---