Substrates and Products

Fig. 4. Requirements, substrates, and products of Mo-nitrogenase catalysis, where I is the MoFe protein II the Fe protein and Pi is inorganic phosphate. The generating system is composed of creatine phosphate and creatine phosphokinase to recycle the inhibitory MgADP produced during catalysis to...

The rate of side-chain cleavage of sterols is limited by the low solubiUty of substrates and products and thek low transport rates to and from cells. Cyclodextrins have been used to increase the solubiUties of these compounds and to assist in thek cellular transport. Cyclodextrins increase the rate and selectivity of side-chain cleavage of both cholesterol and P-sitosterol with no effect on cell growth. Optimal conditions have resulted in enhancement of molar yields of androsta-l,4-diene-3,17-dione (92) from 35—40% to >80% in the presence of cyclodextrins (120,145,146,155). 

The enzyme can be immobilized on the electrode by several techniques (53). The simplest method, first used in 1962, is to trap an enzyme solution between the electrode surface and a semipermeable membrane. Another technique is to immobilize the enzyme in a polymer gel such as polyacrylamide which is coated on the electrode surface. Very thin-membrane films can be obtained by electropolymerization techniques (49,54,55) using polypyrrole, polyindole, or polyphenylenediamine films, among others. These thin films (qv) offer the advantage of improved diffusion of substrate and product that... 

Enzymatic Catalysis. Enzymes are biological catalysts. They increase the rate of a chemical reaction without undergoing permanent change and without affecting the reaction equiUbrium. The thermodynamic approach to the study of a chemical reaction calculates the equiUbrium concentrations using the thermodynamic properties of the substrates and products. This approach gives no information about the rate at which the equiUbrium is reached. The kinetic approach is concerned with the reaction rates and the factors that determine these, eg, pH, temperature, and presence of a catalyst. Therefore, the kinetic approach is essentially an experimental investigation. 

Kinetic Resolutions. From a practical standpoint the principal difference between formation of a chiral molecule by kinetic resolution of a racemate and formation by asymmetric synthesis is that in the former case the maximum theoretical yield of the chiral product is 50% based on a racemic starting material. In the latter case a maximum yield of 100% is possible. If the reactivity of two enantiomers is substantially different the reaction virtually stops at 50% conversion, and enantiomericaHy pure substrate and product may be obtained ia close to 50% yield. Convenientiy, the enantiomeric purity of the substrate and the product depends strongly on the degree of conversion so that even ia those instances where reactivity of enantiomers is not substantially different, a high purity material may be obtained by sacrificing the overall yield. 

The equations for the state variables (viable cells, non-viable cells, substrate, and product) are ... 

The pyruvate dehydrogenase complex (PDC) is a noncovalent assembly of three different enzymes operating in concert to catalyze successive steps in the conversion of pyruvate to acetyl-CoA. The active sites of ail three enzymes are not far removed from one another, and the product of the first enzyme is passed directly to the second enzyme and so on, without diffusion of substrates and products through the solution. The overall reaction (see A Deeper Look Reaction Mechanism of the Pyruvate Dehydrogenase Complex ) involves a total of five coenzymes thiamine pyrophosphate, coenzyme A, lipoic acid, NAD+, and FAD. 

Reaction.s 1 through 15 con.stitute the cycle that lead.s to die formation of one equivalent of gluco.se. The enzyme catalyzing each step, a concise reaction, and die overall carbon balance is given. Numbers in parendieses show die numbers of carbon atoms in the substrate and product molecules. Prefix numbers indicate in a. stoichiometric fashion how many times each step is carried out in order to provide a balanced net reacdon. 

The catalytic effect of aromatic nitro groups in the substrate and product or in an added inert nitro compoimd (e.g., w-dinitrobenzene in 18) has been observed in the reaction of 2,4-dinitrochlorobenzene with an amine in chloroform. Hydrogen bonding to benzil or to dimethyl sulfone and sulfoxide also provided catalysis. It is clear that the type of catalysis of proton transfer shown in structure 18 will be more effective when hydrogen bonding is to an azine-nitrogen. 

To represent the balance for NADH using quantitative relationships, we must consider the degrees of reductance of substrate and products. 

The product yield coefficient can then be calculated, taking into account the relative numbers of carbons in the substrate and product. The molar yield coefficient is then written as... 

For type 3 processes, growth and metabolic activity reach a maximum early in the batch process cycle (Figure 3.1) and it is not until a later stage, when oxidative activity is low, that maximum desired product formation occurs. The stoichiometric descriptions for both type 3 and 4 processes depend upon the particular substrates and products involved. In the main, product formation in these processes is completely uncoupled from cell growth and dictated by kinetic regulation and activity of cells. 

Both of these factors are difficult. Obtaining representative samples of filamentous organisms from cultures is difficult and both substrate and product are relatively insoluble. Thus it is difficult to monitor these processes. Nevertheless, in practice satisfactory procedures have been developed to generate data that are sufficiently accurate to enable reasonable monitoring of cultures. 

In biochemical engineering processes, measurement of dissolved oxygen (DO) is essential. The production of SCP may reach a steady-state condition by keeping the DO level constant, while the viable protein is continuously harvested. The concentration of protein is proportional to oxygen uptake rate. Control of DO would lead us to achieve steady SCP production. Variation of DO may affect retention time and other process variables such as substrate and product concentrations, retention time, dilution rate and aeration rate. Microbial activities are monitored by the oxygen uptake rate from the supplied ah or oxygen. 

For steady-state no product is formed which means there are no changes in substrate and product concentrations ... 

Substrate and product inhibitions analyses involved considerations of competitive, uncompetitive, non-competitive and mixed inhibition models. The kinetic studies of the enantiomeric hydrolysis reaction in the membrane reactor included inhibition effects by substrate (ibuprofen ester) and product (2-ethoxyethanol) while varying substrate concentration (5-50 mmol-I ). The initial reaction rate obtained from experimental data was used in the primary (Hanes-Woolf plot) and secondary plots (1/Vmax versus inhibitor concentration), which gave estimates of substrate inhibition (K[s) and product inhibition constants (A jp). The inhibitor constant (K[s or K[v) is a measure of enzyme-inhibitor affinity. It is the dissociation constant of the enzyme-inhibitor complex. 

Use of biofilm reactors for ethanol production has been investigated to improve the economics and performance of fermentation processes.8 Immobilisation of microbial cells for fermentation has been developed to eliminate inhibition caused by high concentrations of substrate and product, also to enhance productivity and yield of ethanol. Recent work on ethanol production in an immobilised cell reactor (ICR) showed that production of ethanol using Zymomonas mobilis was doubled.9 The immobilised recombinant Z. mobilis was also successfully used with high concentrations of sugar (12%-15%).10... 

The batch experiment had neither incoming fresh media nor any product stream leaving the fermentation vessel. A complete experimental set up with a B. Braun Biostat, is shown in the above laboratory experimental set up. The continuous flow of media requires a feed tank and product reservoir. The batch process has many disadvantages such as substrate and product inhibition, whereas in the continuous process the fresh nutrients may remove any toxic by-product formed. 

Most of these enzymes have steroids or fatty acids as their substrates (Table 1). Many P450s in endogenous biotransformation pathways are characterized by usually very narrow substrate and product specificity and by tight regulatory systems, especially those involved in steroid hormone biosynthesis. 

Aqueous-organic two-phase reaction has been widely performed [18]. One of the purposes of using two-phase reaction system is to control the substrate concentration in aqueous phase where the biocatalysts exist. Hydrophobic substrate and products dissolve easily in the organic phase, so that the concentration in the aqueous phase decreases. The merits of controlling and decreasing the substrate concentration in the aqueous phase are as follows ... 

The decomposition of unstable substrate/product by aqueous buffer can be prevented by dissolving the substrate and product in the organic phase. 

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