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Sequencing, proteins sequencers

Schneider, G., and Wrede, P. (1993). Signal analysis of protein targeting sequences. Protein Sequence Data Analysis 5, 227-236. [Pg.342]

The NCBI s Entrez is apowerful database search engine. This integrated search engine provides a menu (http //www.ncbi.nih.gov/Entrez/index.html) offering the user selections to search biomedical literature (PubMed), databases on OMIM, nucleotide sequence, protein sequence, whole genome sequences, 3D macromolecular structures, taxonomy (organisms in GenBank), SNP,... [Pg.497]

Molecular Database Nucleotide Sequences Protein Sequences Structures... [Pg.498]

Taking all factors into account, NCBI uses four core data elements bibliographic citations, DNA sequences, protein sequences, and three-dimensional structures. In addition, two projects (taxonomy and genome maps) are more interpretive but nonetheless are so important as organizing and linking resources that NCBI has built a considerable base in these areas as well. [Pg.24]

The version line contains the Accession.version and the gi (geninfo identifier). These identifiers are associated with a unique nucleotide sequence. Protein sequences also have accession numbers (protein ids). These are also represented as Accession, version and gi numbers for unique sequences (see below). If the sequence changes, the version number in the Accession.version will be incremented by one and the gi will change (although not by one, but to the next available integer). The accession number stays the same. The example above shows version 1 of the sequence having accession number AFl 11785 and gi number 4808814. [Pg.53]

DNA sequences protein sequences text, administrative field date field ... [Pg.282]

Research on the galactosyltransferases over the last four decades has resulted in a wealth of information that is now easily accessible in various databases. The reader is encouraged to explore three databases in particular 1) Entrez 2) ExPASy and 3) CAZY. As detailed below, these databases contain information regarding nucleotide sequence, protein sequence and enzyme properties such as reaction catalyzed. Km, metal ion requirements, inhibitors, etc. [Pg.1296]


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A New Day in Chromatography and the Dawn of Protein Sequencing

ATLAS of Protein and Genomic Sequences

Acyl carrier protein, fatty acid synthase sequence

Advanced Protein Sequencing Techniques

Alignment protein sequence

Alignment protein sequence with

Amino acid sequence ordered/disordered proteins

Amino acid sequence, basic protein from

Amino acid sequence, basic protein from thynnine

Amino acid sequence, protein crystallization

Amino acid sequences in proteins

Amino acid sequences protein disulfide-isomerase

Amino acid sequencing of proteins

Amino protein sequencing

Amino-terminal, protein sequence analysis

Antigen protein sequences

Applications - Protein Sequence Analysis

Assigning Enzyme Function from DNA Sequence or Recombinant Proteins

Atlas of Protein Sequences and Structures

Blue copper proteins ligands, amino acid sequence

Blue copper proteins sequences

Bottom-up protein sequencing

CREATION AND ANALYSIS OF PROTEIN MULTIPLE SEQUENCE ALIGNMENTS

Capsid proteins amino acid sequences

Carboxy-terminal protein sequence analysis

Cation sequences proteins

Chemoattractant protein-1, amino acid sequence

Chondroitin sulfate-protein carbohydrate sequence

Collecting and sequencing proteins

Consensus sequences, protein kinases

De novo protein sequencing

Deduced protein sequence

Directed protein sequence space

Disordered proteins sequence attributes

Drosophila protein sequences encoded

Edman reagent protein sequencing

Engineering Protein Sequences

Escherichia coli protein signal sequences

Expression systems protein-tagging sequence

General Protocol for Amino Acid Sequence Determination of Proteins

Genetic code deduced protein sequence

Genetic engineering protein amino acid sequence

Homologous proteins multiple sequence alignment

Homologous proteins sequences

Interferon consensus sequence binding protein

JOY protein sequence/structure representation

Lyophilized protein sequencing

Mass spectroscopy protein sequencing

Membrane-bound proteins amino acid sequence

Munich Information Center for Protein Sequences

N-Terminal Protein Sequencer

Network Protein Sequence

Network Protein Sequence Analysis

Network Protein Sequence Analysis (NPS

Nonredundant protein sequence database

Nucleic acids protein sequence translation

Ordered proteins, amino acid sequence

Ordered proteins, amino acid sequence prediction

PIR Protein Sequence Database

PROTEOMICS PROTEIN SEQUENCE ANALYSIS

Peptide protein sequencing

Phenylisothiocyanate protein sequencing

Prediction of Protein Secondary Structures from Sequences

Predictive methods using protein sequences

Primary Structure of Proteins Sequence Analysis by Tandem Mass Spectrometry

Primary protein sequence

Primary structure Protein sequencing

Protein Data Bank sequence database

Protein Sequence Analysis server

Protein Sequence Information and Features

Protein Sequencing by Mass Spectrometry

Protein Signal sequence Targeting

Protein domains sequencing

Protein engineering process using sequence activity

Protein engineering sequence-activity based strategies

Protein engineering sequence-activity relationships

Protein folding recognition using sequence profiles

Protein identification, sequence database

Protein identity sequence-based

Protein import, nucleus sequence

Protein kinases sequences

Protein ladder sequencing

Protein local sequence patterns

Protein peptide sequences

Protein peptide sequencing methods

Protein primary sequence analysis

Protein secretion signal sequences

Protein sequence

Protein sequence

Protein sequence activity relationships

Protein sequence alignments diversity

Protein sequence alignments substitution tables

Protein sequence analysis

Protein sequence analysis tandem mass spectrometry

Protein sequence and structure

Protein sequence characterization

Protein sequence databases

Protein sequence determination

Protein sequence diversity

Protein sequence families

Protein sequence homology

Protein sequence mass spectrometry

Protein sequence model building

Protein sequence pool

Protein sequence prediction

Protein sequence secondary

Protein sequence secondary databases

Protein sequence similarity

Protein sequence space

Protein sequence substitution tables

Protein sequence-structure

Protein sequence-structure FEATURE computer program

Protein sequence-structure alignment errors

Protein sequence-structure growing database

Protein sequence-structure methods

Protein sequence-structure sample structures

Protein sequence-structure scores

Protein sequence-structure target proteins

Protein sequence-structure threading methods

Protein sequences accession numbers

Protein sequences control

Protein sequences from genes

Protein sequences sequence patterns

Protein sequences submitting

Protein sequences, amino acids

Protein sequences, from genomic sequence

Protein sequencing

Protein sequencing

Protein sequencing Edman reaction

Protein sequencing alignment

Protein sequencing amino acid composition

Protein sequencing amino acid function analysis

Protein sequencing and structure

Protein sequencing cyclic peptides

Protein sequencing data acquisition

Protein sequencing disulfide bond cleavage

Protein sequencing disulfide bond position

Protein sequencing domain duplication

Protein sequencing domain recognition

Protein sequencing enzymatic methods

Protein sequencing finding sequences

Protein sequencing gene duplication

Protein sequencing genome analysis

Protein sequencing mass spectrometry

Protein sequencing methods

Protein sequencing molecular biology

Protein sequencing nucleotides compared

Protein sequencing overview

Protein sequencing peptide derivatization

Protein sequencing peptide fragmentation nomenclature

Protein sequencing procedure

Protein sequencing profile match searching

Protein sequencing rationale

Protein sequencing sensitivity

Protein sequencing solid phase

Protein sequencing specific peptide bond cleavage

Protein sequencing specificity

Protein sequencing stable isotope labeling

Protein sequencing strategy

Protein staining with known sequences

Protein structure analysis sequence

Protein structure patterns sequence-specific recognition

Protein structure prediction from amino acid sequences

Protein structure sequence alignments

Protein targeting signal sequence (secretory

Protein! s) sequences

Protein-Sequencing Analysis (Proteomics)

Protein-based materials amino acid residue sequences

Protein-based materials repeating sequence

Protein-coding DNA sequences

Protein-coding sequence

Protein-like Copolymers Structure Dictates Sequence

Proteins Are Targeted to Their Destination by Signal Sequences

Proteins alpha amino acid sequencing

Proteins amino acid sequencing

Proteins cDNA sequencing

Proteins complete sequence analysis

Proteins integral amino acid sequence

Proteins micro sequencing

Proteins peptide sequencing using mass

Proteins sequence identification

Proteins varied sequence

Random Sequence Heteropolymers are Not Protein-Like, for They Have No Latent Heat

Retinol-binding protein amino acid sequence

Rieske proteins amino acid sequences

SEQUENCING OF PEPTIDES AND PROTEINS

SWISS-PROT protein sequence database

SWISS-PROT protein sequence database TrEMBL supplement

SWISS-PROT protein sequence database description

SWISS-PROT protein sequence database linked databases

Sequence Alignment in DNA and Protein Sequences

Sequence Homology and Protein Evolution

Sequence alignment of proteins

Sequence collection searching protein identification

Sequence of proteins

Sequence repeats, in fibrous proteins

Sequence repeats, type in fibrous proteins

Sequence specificity major-minor groove binding proteins

Sequence specificity, synthetic proteins

Sequence structure mappings of proteins

Sequence-specific DNA-binding protein

Sequence-specific RNA-binding proteins

Sequence-specific protein-DNA

Sequence-specific protein-DNA interactions

Sequence—function relationships proteins

Sequencing of proteins

Sequencing, proteins Edman degradation

Sequencing, proteins chemical cleavage

Sequencing, proteins cysteine modification

Sequencing, proteins data evaluation

Sequencing, proteins peptide mapping

Sequencing, proteins reagents

Sequencing, proteins recovery

Sequencing, proteins sample preparation

Signal sequences with proteins

Solid-phase sequencing of peptides and proteins

Specialized Protein Sequence Databases

Stable isotope protein sequencing

Statistical Analysis of Protein Sequences

Sulfur-rich protein, amino acid sequence

Superfamily Analysis Understanding Protein Function from Structure and Sequence

Top-down protein sequencing

TrEMBL protein sequence database

World Wide Web protein sequences/structures

Yeast proteins amino acid sequencing

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