Proteins amino acid derivatives

In the case of protein amino acid-derived alkaloids, the second obligatory intermedia is synthesized from the obligatory intermedia by chemical reactions. In the pelletierine synthesis pathway started with L-lysine, the second obligatory intermedia is A -piperidinium cation. It is formed by a Maimich reaction from A -piperidine (obligatory intermedia) and COSCoA. The second obligatory intermedia, by hydrolysis decarboxylation, produces pelletierine. 

Ways have been found, in the laboratory, of broadening the specificity of some enzymes (particularly the proteinases, but also certain lipases that can be used in laboratory peptide synthesis see Chapter 7), for example by employing organic solvents, so that these enzymes catalyse some of the reactions of non-protein amino acid derivatives and some of the reactions of peptides that incorporate unusual amino acids. It has proved possible to involve D-enantiomers of the coded amino acids and d- and L-isomers of non-protein amino acids in peptide synthesis, to generate non-natural peptides. 

Mobile phase Cyclodextrin Derivatives Proteins Amino Acid Derivatives... 

Taken together, the recent findings have added confidence to the previously discussed protein amino-acid derivation of all natural glucosinolates. Moreover, the results suggest that future explorers within this area should hardly anticipate real structural caprices but rather be content with unexceptional modifications on biogenetically transparent frameworks. 

Amino acid-derived hormones include the catecholamines, epinephrine and norepinephrine (qv), and the thyroid hormones, thyroxine and triiodothyronine (see Thyroid AND ANTITHYROID PREPARATIONS). Catecholamines are synthesized from the amino acid tyrosine by a series of enzymatic reactions that include hydroxylations, decarboxylations, and methylations. Thyroid hormones also are derived from tyrosine iodination of the tyrosine residues on a large protein backbone results in the production of active hormone. 

In the 1950s, a group of coryneform bacteria which accumulate a large amount of L-glutamic acid in the culture medium were isolated (21). The use of mutant derivatives of these bacteria offered a new fermentation process for the production of many other kinds of amino acids (22). The amino acids which are produced by this method are mostiy of the T.-form, and the desired amino acid is singly accumulated. Therefore, it is very easy to isolate it from the culture broth. Rapid development of fermentative production and en2ymatic production have contributed to the lower costs of many protein amino acids and to their availabiUty in many fields as economical raw materials. 

The importance of Heinrich Ritthausen s fundamental studies, 1862 to 1899, on analytical procedures for the determination of amino acids in proteins has been emphasized in the biographical sketches which have been presented by Osborne (210), Vickery (289), and Chibnall (47). It is of particular interest to note here the prediction made by Ritt-hausen about 1870 that the amino acid composition would prove to be the most adequate basis for the characterization of proteins. Ritthausen and Kreusler (230) were the first, in 1871, to determine amino acids derived from proteins, and some of the values which they found for aspartic and glutamic acids are given in Table III (cited by Chibnall, 47, and Vickery, 286). 

The isotope dilution principle, first employed by Hevesy and Hobbie (133) in 1932 for the determination of lead in ores, was applied by Schoenheimer et al. (241) to the determination of amino acids. [Shemin and Foster (248) have reviewed this topic.] An N15-amino acid derivative was added to a protein hydrolyzate, a sample of the amino acid to be determined was isolated and purified, the excess N15 in this product was estimated with the mass spectrograph, and the grams of amino acid originally present were calculated from Equation 2. 

In the soil, an imbalance of amino acids, the presence of D-amino acids derived from microbial metabolism, or analogs and homologs of constituent protein amino acids could produce a deviation in the... 

Figure 10.4. Effect on apatite-collagen isotopic fractionation due to inhibition of amino acid production and preferred use of exogenous amino acids. Carnivore and herbivore, both based on C3 plants, have similar bulk isotopic composition of total edible tissues (T), leading to similar 5 C for apatite carbonate (AP). Collagen (CO) of carnivore is more enriched in Cthan that of herbivore, because of preferential utilization of amino acids derived from protein (P) of herbivore flesh in construction of carnivore s proteins. C ss = assimilated carbon.

In mammals, peptide hormones typically contain only the a-amino acids of proteins finked by standard peptide bonds. Other peptides may, however, contain nonprotein amino acids, derivatives of the protein amino acids, or amino acids finked by an atypical peptide bond. For example, the amino terminal glutamate of glutathione, which participates in protein folding and in the metabolism of xenobiotics (Chapter 53), is finked to cysteine by a non-a peptide bond (Figure 3—3). The amino terminal glutamate of thyrotropin-... 

Multiple development techniques using stepwise solvent gradients enable a subset of optimal separation conditions to be used to separate a mixture of wide polarity that cannot be separated using a single mobile phase (117,119,120,125). As an example of this approach the separation of 20 common protein amino acid PTH-derivatives is shorn in Figure 7.12 (126). Five... 

Chin, C. C. Q., Ion-exchange chromatography of some amino acid derivatives found in proteins, Meth. Enzymol., 106, 17, 1984. 

Drosophila DDC belongs to a family of pyridoxal-dependent decarboxylases that extends from prokaryotes to eukaryotic plants and animals. The members of this family show significant sequence similarity over much of their length, even though the individual proteins have quite different substrate specificities, including the amino acids tyrosine, tryptophan, phenylalanine, histidine, and glutamate, and the amino acid derivatives... 

Most cyanogenic glycosides are biogenetically derived from the amino acids phenylalanine, tyrosine, valine, isoleucine, or leucine but the non-protein amino acid cyclopentenylglycine and probably, nicotinic acid also serve as precursors (Figure 5.1) [9]. 

If a monoclonal antibody was generated by immunization with a full-length native protein rather than a peptide, then the immunized mouse will generate antibodies that recognize both linear and conformationally dependent epitopes. Only a small subset of these monoclonal antibodies will likely be useful for clinical use on formalin-fixed, paraffin-embedded tissue (FFPE) samples. Those that are useful tend to have epitopes that are linear the epitopes are not dependent on the protein s three-dimensional conformation (see Chapter 16). Therefore, for antibodies generated in response to immunization with full-length proteins, the peptides that serve as positive controls will be linear stretches of amino acids derived from the native protein sequence, as listed in protein databases. 

Jim, S., Jones, V., Copley, M. S., Ambrose, S. H. and Evershed, R. P. (2003a) Effects of hydrolysis on the delta C 13 values of individual amino acids derived from polypeptides and proteins. Rapid Communications in Mass Spectrometry 17, 2283 2289. 

Akagi T, Wang X, Uto T et al (2007) Protein direct delivery to dendritic cells using nanoparticles based on amphiphilic poly(amino acid) derivatives. Biomaterials 28 3427-3436... 

Hormonal actions on target neurons are classified in terms of cellular mechanisms of action. Hormones act either via cell-surface or intracellular receptors. Peptide hormones and amino-acid derivatives, such as epinephrine, act on cell-surface receptors that do such things as open ion-channels, cause rapid electrical responses and facilitate exocytosis of hormones or neurotransmitters. Alternatively, they activate second-messenger systems at the cell membrane, such as those involving cAMP, Ca2+/ calmodulin or phosphoinositides (see Chs 20 and 24), which leads to phosphorylation of proteins inside various parts of the target cell (Fig. 52-2A). Steroid hormones and thyroid hormone, on the other hand, act on intracellular receptors in cell nuclei to regulate gene expression and protein synthesis (Fig. 52-2B). Steroid hormones can also affect cell-surface events via receptors at or near the cell surface. 

Glucosinolates are derived from amino acids. The precursor amino acids comprise seven protein amino acids (alanine, valine, leucine, isoleucine, phenylalanine, tyrosine, and tryptophan), a number of chain-elongated methionines (CH3-S-(CH2)2-(CH2)n-CH(NH2)-COOH, n = 1-9), and chain-elongated... 

PROTEIN AMINO ACID RESIDUES (AND DERIVATIVES) AS LIGANDS... 

Protein Amino Acid Residues (and Derivatives) as Ligands.27... 

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