Mass spectrometry electronic spectrum

GC has been the main separation technique in the international interlaboratory comparison and proficiency tests a l4>. All participating laboratories used GC, either to determine the retention behavior of analyzed chemicals or as part of the hyphenated techniques. It has been agreed, on the basis of these tests, that the unambiguous identification of CWC-related chemicals has to be based on at least two different analysis techniques, preferably by two different spectrometric analysis techniques, when available, giving consistent results (15). The minimum acceptable data are the correct electron impact mass spectrometry (EIMS) spectrum together... 

Understanding how molecules fragment upon electron impact pennits a mass spectrum to be analyzed in sufficient detail to deduce the structure of an unknown compound. Thousands of compounds of known structure have been examined by mass spectrometry, and the fragmentation patterns that characterize different classes are well documented. As various groups are covered in subsequent chapters, aspects of their fragmentation behavior under conditions of electron impact will be described. 

An on-line chromatography/atmospheric pressure chemical ionization tandem mass spectrometry (LC-APCI/MS/MS) methods was developed for rapid screen of pharmacokinetics of different drugs, including 5 (98RCM1216). The electron impact mass spectrum of 5 and ethyl 9,10-difluoro-3-methyl-7-oxo-2,3-dihydro-7Ff-pyrido[l,2,3- fe]-l,4-benzoxazine-6-carboxylate was reported (97MI28). Electron impact/Fourier transform... 

Electron impact/Fourier transform ion cyclotron resonance mass spectrometry was used to study the mass spectrum of 7 (96MI20). 

Supersonic molecular beam (SMB) mass spectrometry (SMB-MS) measures the mass spectrum of vibra-tionally cold molecules (cold El). Supersonic molecular beams [43] are formed by the co-expansion of an atmospheric pressure helium or hydrogen carrier gas, seeded with heavier sample organic molecules, through a simple pinhole (ca. 100 p,m i.d.) into a 10 5-mbar vacuum with flow-rates of 200 ml. rn in. In SMB, molecular ionisation is obtained either through improved electron impact ionisation, or through hyperthermal surface ionisation... 

Enhanced molecular ion implies reduced matrix interference. An SMB-El mass spectrum usually provides information comparable to field ionisation, but fragmentation can be promoted through increase of the electron energy. For many compounds the sensitivity of HSI can be up to 100 times that of El. Aromatics are ionised with a much greater efficiency than saturated compounds. Supersonic molecular beams are used in mass spectrometry in conjunction with GC-MS [44], LC-MS [45] and laser-induced multiphoton ionisation followed by time-of-flight analysis [46]. 

In soft ionization methods the excess energy deposited onto the ionized molecule is very small and stable even-electron ions are formed. This leads to easy determination of the molecular weight of the analyte, but as fragmentation is absent or it occurs to a very low extent, structural information is missing in the mass spectrum. However, one can obtain structural information by causing ion fragmentation out of the source by means of tandem mass spectrometry experiments (see below). 

Microprobe laser desorption laser ionisation mass spectrometry (/xL2MS) is used to provide spatial resolution and identification of organic molecules across a meteorite sample. Tracking the chemical composition across the surface of the meteorite requires a full mass spectrum to be measured every 10 p,m across the surface. The molecules must be desorbed from the surface with minimal disruption to their chemical structure to prevent fragmentation so that the mass spectrum consists principally of parent ions. Ideally, the conventional electron bombardment ionisation technique can be replaced with an ionisation that is selective to the carbonaceous species of interest to simplify the mass spectrum. Most information will be obtained if small samples are used so that sensitivity levels should be lower than attomolar (10—18 M) fewer than 1000 molecules can be detected and above all it must be certain that the molecules came from the sample and are not introduced by the instrument itself. 

Rarely will it be possible to draw conclusions directly from the raw data of analytical measurements and it is usual for some refinement of the data to be carried out. In its simplest form this could merely comprise background corrections, but it is often much more complex, requiring corrections for a number of factors as in mass spectrometry, X-ray fluorescence and electron probe microanalysis. More complex routines made available by computers include spectrum smoothing, stripping one component from a spectrum or making peak area measurements from chromatograms. 

Quite often a normal electron ionization mass spectrum appears insufficient for reliable analyte identification. In this case additional mass spectral possibilities may be engaged. For example, the absence of the molecular ion peak in the electron ionization spectrum may require recording another type of mass spectrum of this analyte by means of soft ionization (chemical ionization, field ionization). The problem of impurities interfering with the spectra recorded via a direct inlet system may be resolved using GC/MS techniques. The value of high resolution mass spectrometry is obvious as the information on the elemental composition of the molecular and fragment ions is of primary importance. 

Fig. 1.6 (A) Electron impact spectrum obtained on a single quadrupole mass spectrometer of a compound with Mr = 355. (B) Product ion spectrum after atmospheric pressure ionization obtained on a triple quadrupole instrument. Chemical ionization and atmospheric pressure ionization give in both cases protonated precursor ions, which is ideal for tandem mass spectrometry.

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