Mass spectrometer, choice

In essence, a guided-ion beam is a double mass spectrometer. Figure A3.5.9 shows a schematic diagram of a griided-ion beam apparatus [104]. Ions are created and extracted from an ion source. Many types of source have been used and the choice depends upon the application. Combining a flow tube such as that described in this chapter has proven to be versatile and it ensures the ions are thennalized [105]. After extraction, the ions are mass selected. Many types of mass spectrometer can be used a Wien ExB filter is shown. The ions are then injected into an octopole ion trap. The octopole consists of eight parallel rods arranged on a circle. An RF... 

A connnon approach has been to measure the equilibrium constant, K, for these reactions as a fiinction of temperature with the use of a variable temperature high pressure ion source (see section (Bl.7.2)1. The ion concentrations are approximated by their abundance in the mass spectrum, while the neutral concentrations are known from the sample mlet pressure. A van t Hoff plot of In K versus /T should yield a straight Ime with slope equal to the reaction enthalpy (figure B1.7.11). Combining the PA with a value for basicityG at one temperature yields a value for A.S for the half-reaction involving addition of a proton to a species. While quadnipoles have been tire instruments of choice for many of these studies, other mass spectrometers can act as suitable detectors [19, 20]. 

The choice of a mass spectrometer to fulfill any particular task must take into account the nature of the substances to be examined, the degree of separation required for mixtures, the types of ion source and inlet systems, and the types of mass analyzer. Once these individual requirements have been defined, it is much easier to discriminate among the numerous commercial instruments that are available. Once suitable mass spectrometers have been identified, it is then often a case of balancing capital and running costs, reUability, ea.se of routine use, after-sales service, and manufacturer reputation. 

Multidimensional or hyphenated instmments employ two or more analytical instmmental techniques, either sequentially, or in parallel. Hence, one can have multidimensional separations, eg, hplc/gc, identifications, ms/ms, or separations/identifications, such as gc/ms (see CHROMATOGRAPHY Mass spectrometry). The purpose of interfacing two or more analytical instmments is to increase the analytical information while reducing data acquisition time. For example, in tandem-mass spectrometry (ms/ms) (17,18), the first mass spectrometer appHes soft ionization to separate the mixture of choice into molecular ions the second mass spectrometer obtains the mass spectmm of each ion. 

The choice of mass spectrometer for a particular analysis depends on the namre of the sample and the desired results. For low detection limits, high mass resolution, or stigmatic imaging, a magnetic sector-based instrument should be used. The analysis of dielectric materials (in many cases) or a need for ultrahigh depth resolution requires the use of a quadrupole instrument. 

The application areas for LC-MS, as will be illustrated later, are diverse, encompassing both qualitative and quantitative determinations of both high-and low-molecular-weight materials, including synthetic polymers, biopolymers, environmental pollutants, pharmaceutical compounds (drugs and their metabolites) and natural products. In essence, it is used for any compounds which are found in complex matrices for which HPLC is the separation method of choice and where the mass spectrometer provides the necessary selectivity and sensitivity to provide quantitative information and/or it provides structural information that cannot be obtained by using other detectors. 

There are three main reasons for this choice. Firstly, it becomes more and more difficult to obtain recordable, molecular-ion signals from un-derivatized carbohydrates as their M, increases significantly above 3000. Secondly, the mass spectrometers that have been used in all high-mass-carbofiydrate studies published at the time of writing this article are not capable of very sensitive analysis above —3800 mass units (see later). Thirdly, at masses >4000, it is usually not practicable to work at the resolution necessary for adjacent peaks to appear as separate signals in the spectrum. To do so would require that the source and collector slits be narrowed to such a degree that there would be an unacceptable loss in sensitivity. Thus, spectra acquired at mass >4000 are usually composed of unresolved clusters. 

Universal and selective detectors, linked to GC or LC systems, have remained the predominant choice of analysts for the past two decades for the determination of pesticide residues in food. Although the introduction of bench-top mass spectrometers has enabled analysts to produce more unequivocal residue data for most pesticides, in many laboratories the use of selective detection methods, such as flame photometric detection (FPD), electron capture detection (BCD) and alkali flame ionization detection (AFID) or nitrogen-phosphorus detection (NPD), continues. Many of the new technologies associated with the on-going development of instrumental methods are discussed. However, the main objective of this section is to describe modern techniques that have been demonstrated to be of use to the pesticide residue analyst. 

Specificity is unsurpassed. Traditionally, MS was performed on very large and expensive high-resolution sector instruments operated by experienced specialists. The introduction of low-resolution (1 amu), low-cost, bench-top mass spectrometers in the early 1980s provided analysts with a robust analytical tool with a more universal range of application. Two types of bench-top mass spectrometers have predominated the quadrupole or mass-selective detector (MSD) and the ion-trap detector (ITD). These instruments do not have to be operated by specialists and can be utilized routinely by residue analysts after limited training. The MSD is normally operated in the SIM mode to increase detection sensitivity, whereas the ITD is more suited to operate in the full-scan mode, as little or no increase in sensitivity is gained by using SIM. Both MSDs and ITDs are widely used in many laboratories for pesticide residue analyses, and the preferred choice of instrument can only be made after assessment of the performance for a particular application. 

Currently, HPLC/fiuorescence is still the most common technique for the determination of residues of oxime carbamates. With the introduction of ESI and APCI MS interfaces, HPLC/MS analysis for oxime carbamates in various sample matrices has become widespread. However, for a rapid, sensitive, and specific analysis of biological and environmental samples, HPLC/MS/MS is preferred to HPLC/MS and HPLC/fiuorescence. With time, improved and affordable triple-quadrupole mass spectrometers will be available in more analytical laboratories. With stricter regulatory requirements, e.g., highly specific and conclusive methods with lower LOQ, HPLC/MS/MS will be a method of choice for oxime carbamates and their metabolites. 

The corresponding liquid-phase chemistry can be used to promote ion formation by appropriate choice of solvent and pH, salt addition to form M.Na+ or M.NH4+, and postcolumn addition of reagents. The primary applications of ESI-MS are in the biopolymer field. The phenomenon of routine multiple charging is exclusive to electrospray, which makes it a very valuable technique in the fine chemical and biochemical field, because mass spectrometers can analyse high-molecular-mass samples without any need to extend their mass range, and without any loss of sensitivity. However, with ESI, molecules are not always produced with a distribution of charge states [137], Nevertheless, this phenomenon somehow complicates the determination of the true mass of the unknown. With conventional low-resolution mass spectrometers, the true mass of the macromolecule is determined by an indirect and iterative computational method. 

Applications Sector instruments are applied for niche applications such as high-resolution measurements and fundamental ion chemistry studies. Magnetic sector mass spectrometers remain the instrument of choice in areas of target compound trace analysis, accurate mass measurement and isotope ratio measurement. 

Selection of a suitable ionisation method is important in the success of mixture analysis by MS/MS, as clearly shown by Chen and Her [23]. Ideally, only molecular ions should be produced for each of the compounds in the mixture. For this reason, the softest ionisation technique is often the best choice in the analysis of mixtures with MS/MS. In addition to softness , selectivity is an important factor in the selection of the ionisation technique. In polymer/additive analysis it is better to choose an ionisation technique which responds preferentially to the analytes over the matrix, because the polymer extract often consists of additives as well as a low-MW polymer matrix (oligomers). Few other reports deal with direct tandem MS analysis of extracts of polymer samples [229,231,232], DCI-MS/MS (B/E linked scan with CID) was used for direct analysis of polymer extracts and solids [69]. In comparison with FAB-MS, much less fragmentation was observed with DCI using NH3 as a reagent gas. The softness and lack of matrix effect make ammonia DCI a better ionisation technique than FAB for the analysis of additives directly from the extracts. Most likely due to higher collision energy, product ion mass spectra acquired with a double-focusing mass spectrometer provided more structural information than the spectra obtained with a triple quadrupole mass spectrometer. 

The chromatographic and mass spectrometric choices facing the analyst in coupling SFC and MS successfully, namely injection method column type of flow restrictor and mass spectrometer ionisation method and type of vacuum system, have been described [398]. In SFC-MS coupling, the restrictor plays a major role, as the expansion behaviour to a large extent determines the overall performance of the SFC-MS system and defines the range of applications. 

Detection of the effluent in a 2D system is carried out at the end of the second dimension s column. UVand LIF are the most widely used and the simplest methods of detection for CE separations because they are performed on-column. MS detection, unlike UV and LIF, is carried out on the effluent as it exits the CE column. The direct coupling of CE with mass spectrometry has shown great potential in proteomic research (Janini et al., 2004). The method of choice for detection of peptides is MS-electrospray ionization (ESI). However, ESI requires a special interface between the CE column and the mass spectrometer that has proven not to be a simple matter (Issaq et al., 2004). 

Photoionization ti me-of-fli ght mass spectrometry is almost exclusively the method used in chemical reaction studies. The mass spectrometers, detectors and electronics are almost identical. A major distinction is the choice of ionizing frequency and intensity. For many stable molecules multi photon ionization allowed for almost unit detection efficiency with controllable fragmentation(20). For cluster systems this has been more difficult because high laser intensities generally cause extensive dissociation of neutrals and ions(21). This has forced the use of single photon ionization. This works very well for low i oni zati on potential metals ( < 7.87 eV) if the intensity is kept fairly low. In fact for most systems the ionizing laser must be attenuated. A few very small... 

There are several devices for introducing a sample into a mass spectrometer. Their choice is based on the purity and chemico-physical properties of the sample. 

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