Chemical rhodamine

Post-curing and chemical modification improves chemical and solvent resistance (20). Paraformaldehyde and acetylene diurea are added to a hot borax solution. Toluenesulfonamide (p and o), a few drops of phosphorous acid. Brilliant Yellow 6G [2429-76-7] Rhodamine E3B, and Rhodamine 6GDN [989-38-8] are added. After heating, the mass is cured in an oven at 150°C. The resulting cured resin is thermoset but can be ground to fine particle sizes. 

Wang X, Wang J, Guo P, Guo W, Li G (2008) Chemical effect of swirling jet-induced cavitation Degradation of rhodamine B in aqueous solution. Ultrason Sonochem 15 357-363... 

In most cases, the linear absorption is measured with standard spectrometers, and the fluorescence properties are obtained with commercially available spectrofluo-rometers using reference samples with well-known <1>F for calibration of the fluorescence quantum yield. In the ultraviolet and visible range, there are many well-known fluorescence quantum yield standards. Anthracene in ethanol (Cresyl Violet in methanol (commonly used reference samples for wavelengths of 350-650 nm. For wavelengths longer than 650 nm, there is a lack of fluorescence references. Recently, a photochemically stable, D-ji-D polymethine molecule has been proposed as a fluorescence standard near 800 nm [57]. This molecule, PD 2631 (chemical structure shown in Fig. 5) in ethanol, has linear absorption and fluorescence spectra of the reference PD 2631 in ethanol to... 

Activity-based protein profiling (ABPP) is a chemical proteomic strategy in which active-site-directed covalent probes are used to profile the functional states of enzymes in complex proteomes. Activity-based probes (ABPs) can distinguish active enzymes from their inactive zymogens or inhibitor-bound forms. They contain a reactive group intended to modify enzyme active sites covalently and a reporter group (typically rhodamine or biotin) that assists in detection and identification of protein targets. 

Due to their longer wavelength fluorescence and photostability, rhodamine and its derivatives have often been employed for the labeling of probes tested in living cells. Like fluorescein, the chemical structure of rhodamine consists of an upper xanthene ring and a lower benzene ring. In this case, the xanthene ring is substituted... 

Fig. 6.3. Chemical structures of rhodamine and some derivatives. TAMRA = N,N,TV,A-tetramethylrhodamine. Lissamine rhodamine = 3,5-disulfonyl-N,N, A,A-tetramethylrhodamine.

Fig. 7.4 CLSM images of BMS spheres (A) and HMS spheres (B) loaded with FITC-labeled POD. The inset in (B) corresponds to Rhodamine 6G-loaded H MS spheres. (Reproduced from [67] with permission ofthe American Chemical Society, Copyright 2005 American Chemical Society).

The spectral characteristics of protein conjugates made with Lissamine rhodamine B derivatives are of longer wavelength than those of tetramethylrhodamine—more toward the red region of the spectrum. In addition, modified proteins have better chemical stability and are somewhat easier to purify than those made from TRITC (discussed previously). Lissamine derivatives also make more photostable probes than the fluorescein derivatives (Section 1, this chapter). 

Lissamin rhodamine B sulfonyl chloride chemiluminescence reagent, 5 852-853 Lister, Joseph, 11 7 Literature research, in fine chemical... 

Fig. 18 (a) Rhodamine-based Ag+ sensing system and (b) fluorescence response of 48 in the presence of Ag+ and the other cations mentioned in the text. (Reprinted in part with permission from [141]. Copyright 2009 American Chemical Society)... 

TLC coupled with mass spectrometry employing desorption electrospray ionization has been used for the separation of synthetic dyes. The chemical structures of dyes included in the investigation are shown in Fig. 3.7. ODS HPTLC plates (10 X 10 cm) were used as the stationary phase the mobile phase consisted of methanol-tetrahydrofuran (60 40, v/v) containing 50-100 mM ammonium acetate for the positive-ion test and of methanol-water (70 30, v/v) for the negative-ion test. Test mixtures for negative- and positive-ion mode detection consisted of methyleneblue, crystal violet, rhodamine 6G... 

Another study employed CE for the determination of the stoichiometry of the conjugation reaction between immonuglobulin and Lissamine rhodamine-B sulphonyl chloride (LRSC). The chemical structure of the dye is shown in Fig. 3.162. Separation of the unconjugated dye from the conjugated end product was performed by CE using an uncoated fused-silica capillary column (60 cm X 75 //m i.d.). The running buffer consisted of 10 rnM borate and 0.5 mM sodium dodecyl sulphate. The separation voltage was 20 kV and analytes were detected by a fluorescence detector. It was concluded from the results that the CE method combined with... 

Figure 14.2. Chemical structures of some commonly used organic fluorescent probes 1, fluorescein-5-isothiocyanate (FITC) 2, tetramethylrhodamine-5-isothiocyanate (TRITC) 3, 5-carboxyrhodamine B 4, rhodamine X isothiocyanate (XRITC) 5, malachite green isothiocyanate 6, eosin-5-isothiocyanate 7, 1-pyreneisothiocyanate 8, 7-dimethylaminocoumarin-4-acetic acid 9, CY5.180Su.

Figure 1 shows the chemical structure of representative mitochondriotropic molecules. The most widely used among them is Rhodamine 123... 

Figure 1 Chemical structures of commonly used typical mitochondriotropic molecules (A) rhodamine 123 (B) methyltriphenylphosphonium (Q dequalinium chloride.

In general, the chemicals used to create color displays in the daytime are various types of dyes and oils. Though dyes and oils do not fall into the category of pyrolants that generate colored smoke by combustion reactions, they are dispersed in the atmosphere by the combustion or decomposition gases of pyrolants. Typical examples of color dyes are indigo for blue, rhodamine for red, and auramine for yel-... 

The blue-shift results from the chemical environment inside the pores of MCM-41, which is dominated by residual silanol and, especially, non reacted amino groups, and thus more basic compared to that in solution. The interaction of the dye molecules with the host is further confirmed by a broadening of the absorption bands of anchored dyes (e.g. rhodamine B sulfonylchloride, Figure 4) in comparison to the main bands of the free chromophores in solution. 

In order to further elucidate the fate of LCM in tumor cells, their subcellular localization was determined using chemical markers for various organelles. Permeabilized C6 glioma cells were treated with propidium iodide to label nuclei, WGA for the Golgi apparatus and the plasma membrane, and Rhodamine 123 for mitochondria. None of these subcellular compartments were found to contain LCM. In order to identify intracellular acidic compart-... 

Direct labeling of a biomolecule involves the introduction of a covalently linked fluorophore in the nucleic acid sequence or in the amino acid sequence of a protein or antibody. Fluorescein, rhodamine derivatives, the Alexa, and BODIPY dyes (Molecular Probes [92]) as well as the cyanine dyes (Amersham Biosciences [134]) are widely used labels. These probe families show different absorption and emission wavelengths and span the whole visible spectrum (e.g., Alexa Fluor dyes show UV excitation at 350 nm to far red excitation at 633 nm). Furthermore, for differential expression analysis, probe families with similar chemical structures but different spectroscopic properties are desirable, for example the cyanine dyes Cy3 and Cy5 (excitation at 548 and 646 nm, respectively). The design of fluorescent labels is still an active area of research, and various new dyes have been reported that differ in terms of decay times, wavelength, conjugatibility, and quantum yields before and after conjugation [135]. New ruthenium markers have been reported as well [136]. 

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