AMP isolation

From Osteichthyes, piscidins are a new family of AMPs isolated from a hybrid striped bass Morone saxatilis (male) X Morone chrysops (female). Some AMPs from fish are displayed in Figure 29.7. 

DiaZepin Nucleosides. Four naturally occurring dia2epin nucleosides, coformycin (58), 2 -deoxycoformycin (59), adechlorin or 2 -chloro-2 -deoxycoformycin (60), and adecypenol (61), have been isolated (1—4,174,175). The biosynthesis of (59) and (60) have been reported to proceed from adenosine and C-1 of D-ribose (30,176,177). They are strong inhibitors of adenosine deaminase and AMP deaminase (178). Compound (58) protects adenosine and formycin (12) from deamination by adenosine deaminase. Advanced hairy cell leukemia has shown rapid response to (59) with or without a-or P-interferon treatment (179—187). In addition, (59) affects interleukin-2 production, receptor expression on human T-ceUs, DNA repair synthesis, immunosuppression, natural killer cell activity, and cytokine production (188—194). 

Jervis used porous silica coated with chemisorbed polyacrylhydrazide for immobilization of adenosine monophosphate (AMP) [117]. After periodate oxidation of its ribose residue the ligand was coupled to the carrier and used for isolation of lactate dehydrogenase from rabbit muscle. The specific capacity was 2 mg of protein/g adsorbent with a ligand content of 10 pmol/g, whereas recovery of enzymatic activity after elution was 85%. Hipwell et al. [118] found that for effective binding of lactate dehydrogenases on AMP-o-aminoalkyl-Sepharose the spacer arm length required at least 4 methylene links. Apparently, a macromolecule of polyacrylhydrazide acts itself like an extended spacer arm and thus allow AMP to bind the enzyme. 

The addition of sulfite to APS reductase results in changes of the flavin visible spectrum that are explained by the formation of an adduct between the sulfite and the FAD group (135). Addition of AMP to the as-isolated enzyme causes no change in the spectroscopic properties. Addition of AMP to the sulfite-reacted enzyme causes the reduction of center I. However, the formation of a semiquinone signal has never been observed either by EPR or visible spectroscopies. Also, Mossbauer and EPR data indicate that AMP closely interacts with center I (139). 

The general picture of muscle contraction in the heart resembles that of skeletal muscle. Cardiac muscle, like skeletal muscle, is striated and uses the actin-myosin-tropomyosin-troponin system described above. Unlike skeletal muscle, cardiac muscle exhibits intrinsic rhyth-micity, and individual myocytes communicate with each other because of its syncytial nature. The T tubular system is more developed in cardiac muscle, whereas the sarcoplasmic reticulum is less extensive and consequently the intracellular supply of Ca for contraction is less. Cardiac muscle thus relies on extracellular Ca for contraction if isolated cardiac muscle is deprived of Ca, it ceases to beat within approximately 1 minute, whereas skeletal muscle can continue to contract without an extraceUular source of Ca +. Cyclic AMP plays a more prominent role in cardiac than in skeletal muscle. It modulates intracellular levels of Ca through the activation of protein kinases these enzymes phosphorylate various transport proteins in the sarcolemma and sarcoplasmic reticulum and also in the troponin-tropomyosin regulatory complex, affecting intracellular levels of Ca or responses to it. There is a rough correlation between the phosphorylation of Tpl and the increased contraction of cardiac muscle induced by catecholamines. This may account for the inotropic effects (increased contractility) of P-adrenergic compounds on the heart. Some differences among skeletal, cardiac, and smooth muscle are summarized in... 

Reaction of purified Ca " -ATPase with 0.3 mM NBD-Cl in the presence of 1 mM AMP-PNP and 1 mM CaCl2 caused inhibition of ATPase activity with the incorporation of 2= 15 nmol NBD-Cl per mg protein [335]. The inhibition was attributed to the binding of 7-8 nmol NBD-Cl/mg enzyme protein, corresponding to = 1 mol NBD-Cl per mol ATPase. The NBD-labeled enzyme was digested with pepsin and several NBD-labeled peptides were isolated [335]. All peptides contained the Gly-X (Cys) sequence that occurs only in one place in the Ca -ATPase, i.e., at Gly343-Cys344. Therefore NBD-Cl reacts with the same cysteine 344 residue that is also modified by maleimide derivatives [319]. The NBD modified enzyme had only 5-10% of the ATPase activity of the control ATPase, but the steady state concentration of the phosphoenzyme intermediate was only slightly reduced [335]. The Ca ... 

Mehorta and coworkers (1989) observed that isolated fractions of brain and heart cells from rats orally administered 0.5-10 mg endrin/kg showed significant inhibition of Ca+2 pump activity and decreased levels of calmodulin, indicating disruption of membrane Ca+2 transport mechanisms exogenous addition of calmodulin restored Ca+2-ATPase activity. In vitro exposure of rat brain synaptosomes and heart sarcoplasmic reticuli decreased total and calmodulin-stimulated calcium ATPase activity with greater inhibition in brain preparations (Mehorta et al. 1989). However, endrin showed no inhibitory effects on the calmodulin-sensitive calcium ATPase activity when incubated with human erythrocyte membranes (Janik and Wolf 1992). In vitro exposure of rat brain synaptosomes to endrin had no effect on the activities of adenylate cyclase or 3, 5 -cyclic phosphodiesterase, two enzymes associated with synaptic cyclic AMP metabolism (Kodavanti et al. 1988). 

The arsenal of plant defense peptides contains members capable of binding carbohydrate residues, namely /31-4 linked A -acetyl glucosamine residues that form the biopolymer chitin. The actual mode of action remains unclear. Antifungal and antimicrobial activity has been shown in vitro. For example Ac-AMP2 is a small disulfide-rich chitin-binding peptide isolated from the seeds of Amaranthus caudatus with antimicrobial activity. It differs from Ac-AMP 1 by one additional arginine residue at the C-terminus. The structure was determined by NMR and contains a cystine knot motif. Ac-AMP2 displays a so-called hevein domain partly... 

Hager and Szostak used an RNA library in which each member was capped by an adenosine-5 -5 -pyrophosphate group at the 5 -end to isolate ribozymes that catalyze the ligation of an oligoribonucleotide to this activated group. This reaction results in the formation of a 3 -5 -ligation and the release of AMP [82]. 

In the 1940s Carl and Gertrude Cori isolated and purified an active form (phosphorylase a) and an inactive form (phosphorylase b) of an enzyme from muscle. Phosphorylase b is activated by AMP (see page 64). In 1955, Fischer Krebs found an enzyme that catalysed the conversion of phosphorylase b to phosphorylase a, together with hydrolysis of ATP to ADP. Thus it appeared to bring about phosphorylation of the enzyme. The enzyme was termed phosphorylase b kinase, was partially purified and the interconversion was established as... 

Horikawa N, Suzuki T, Uchiumi T, Minamimura T, Tsukada K, Takeguchi N, Sakai H, Cyclic AMP-dependent Cl secretion induced by thromboxane A2 in isolated human colon,/Physiol562 885—897, 2005. 

This enzyme [EC 3.5.4.19] catalyzes the hydrolysis of 5-phosphoribosyl-AMP to produce 5-(5-phospho-D-ribo-sylaminoformimino)-l-(5-phosphoribosyl)tmidazole-4-carboxamide. The enzyme isolated from Neurospora crassa can also catalyze the reactions of histidinol dehydrogenase and phosphoribosyl-ATP pyrophosphatase. 

Fig. 14.1. Electronics for local tunneling spectroscopy. By using an op-amp with FET input stage as the isolation amplifier to the high-voltage amplifier for the z piezo, the holding time on the capacitor can be as long as 100 sec. The values of R and C show typical ranges.

Candida utilis is grown to high biomass concentrations and the extracted RNA is subsequently hydrolysed into the four 5 nucleotides adenosine 5 -monophosphate (AMP), GMP, cytidine and uridine 5 -monophosphate by crude nuclease PI from Penicillium the desired nucleotides are isolated by ion-exchange chromatography and AMP is converted to IMP by adenyl deaminase from Aspergillus [22, 36]. 

Munday, M.R. Hardie, D.G. Isolation of three cyclic-AMP-independent acetyl-CoA carboxylase kinases from lactating rat mammary gland and characterization of their effects on enzyme activity. Eur. J. Biochem., 141, 617-627 (1984)... 

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