Absorption protein denaturation

Texturization is not measured directly but is inferred from the degree of denaturation or decrease of solubility of proteins. The quantities are determined by the difference in rates of moisture uptake between the native protein and the texturized protein (Kilara, 1984), or by a dyebinding assay (Bradford, 1976). Protein denaturation may be measured by determining changes in heat capacity, but it is more practical to measure the amount of insoluble fractions and differences in solubility after physical treatment (Kilara, 1984). The different rates of water absorption are presumed to relate to the degree of texturization as texturized proteins absorb water at different rates. The insolubility test for denaturation is therefore sometimes used as substitute for direct measurement of texturization. Protein solubility is affected by surface hydrophobicity, which is directly related to the extent of protein-protein interactions, an intrinsic property of the denatured state of the proteins (Damodaran, 1989 Vojdani, 1996). 

Enzyme structure may be studied by fluorescence spectroscopy [238-244]. Excitation in the 280-310 nm absorption bands of proteins, usually results in fluorescence from tryptophan (Trp) residues in the 310-390 nm region. The fluorescence from the Trp residues is a convenient marker for protein denaturation and large decreases or red-shifts in fluorescence are observed when proteins are denatured. These changes are most often due to the exposure of the Trp residues that are buried in the protein and may be due to the changes in the proximities of specific residues that may act as fluorescence quenchers. Fluorescence emission characterization of the immobilized... 

In addition to improving drug absorption, permeation enhancers that form mixed micelles with peptides or proteins may also provide protection against metabolic processes, including protease-dependent inactivation, efflux transport, and protein denaturation, all of which could lead to reduced bioavailabUity. A permeation enhancer that may also inhibit some competing metabolic processes could greatly improve the poor and inconsistent bioavailabiUty of some short and cyclic polypeptides such as cyclosporine (11 aa cyclic peptide) (Figure 13.11). 

They are believed to enhance the transbuccal permeation by a mechanism that is similar to that of bile salts, namely, extraction of lipids, protein denaturation, inactivation of enzymes, and swelling of tissues [39], Sodium dodecyl sulfate is reported to have a significant absorption enhancing effect but may also produce damage to the mucosa [13]. The effect of sodium... 

Fig. 1. Partial specific heat capacity of sperm whale metmyoglobin in aqueous solutions with different pH values in the temperature range in which heat denaturation takes place. The observed heat capacity peak corresponds to the heat absorption upon protein denaturation that also results in a significant heat capacity increase A°CP [for details see Privalov et al. (1986)].

Purified COX-2 (0.79 nmol) is treated with 1.0 mol equivalent of inhibitor and the mixture is incubated for 60 min at room temperature. The remaining activity at this time is 4% that of a vehicle-treated control. The sample is then divided in two and the protein denaturated by treatment with four volumes of ethyl acetate/methanol/1 M citric acid (30 4 1). After extraction and centrifugation (10000 g for 5 min), the organic layer is removed and the extraction repeated. The two organic layers are combined and dried under N2. The extract is dissolved in 10 pi of HPLC solvent mixture consisting of water/acetonitrile/acetic acid (50 41 0.1) and 50 pi are injected onto a Novapak C-18 column (3.9 x 150 mm) and developed at 1 ml/min. The inhibitor is detected by absorption at 260 nm and eluted with a retention time of 6.6 min in this system. Control experiments for inhibitor recovery are performed with incubation of the inhibitor in the absence of enzyme and processing of the samples in an identical fashion before quantitation by HPLC. 

A trial was made to take a look at the valence of iron in adrenodoxin (29) using 3 moles of p-chloromercuribenzoate (PCMB) per gram atom of iron (less than saturated level of PCMB), all of the iron could be extracted by 5% trichloroacetic acid solution as ferric iron, which produces a ferrous-o-phenanthroline complex only by the addition of ascorbate as reductant. In the absence of the mercurial, some 50% or more of the iron atoms in the protein can be removed in the ferrous state. This result indicates that the acid extraction causes intramolecular reduction of the protein-bound iron. As shown in Fig. 10, 5.7 M urea as a protein denaturant can slowly bleach the visible absorption under aerobic conditions. About 10% of the residual absorption remains at 414 mp after the reaction is completed. In the presence of both urea and o-phenanthroline, all of the iron present in adrenodoxin reacts with o-phenanthroline to produce the ferrous complex under aerobic conditions. Similar experiments under anaerobic conditions reveal that the... 

Phenol (carhollc acid, hydroxyhenzene [CAS 108-95-2]) Corrosive acid and protein denaturant. Direct eye or skin contact causes severe tissue damage or blindness. Deep skin burns can occur without warning pain, Systemic toxicity by all routes percutaneous absorption of vapor occurs. Vapors highly irritatihg to eyes and respiratory tract. Symptoms include nausea, vomiting, cardiac arrhythmias, circulatory collapse, convulsions, and coma. Toxic to liver and kidney. A tumor promoter. See also p 302. 

Phenol peels are categorized as deep peels. Similar to TCA, phenol works through protein denaturation and coagulation. However, phenol differs from TCA in that it penetrates quickly to the level of the reticular dermis. Phenol is partially detoxified by the liver and excreted through the kidneys. Percutaneous absorption of phenol can lead to rapid elevation of serum phenol levels, resulting in systemic toxicity and cardiac arrhythmias. Therefore, all patients should be cleared from a cardiac, hepatic, and renal standpoint preoperatively. In addition, intraoperative cardiac monitoring is imperative. 

Spectra of cells dried from formalin do not show the characteristic absorption associated with protein aggregates, indicating that formalin fixation does not induce protein denaturation. However, drying from formalin does result in the appearance of a series of sharp absorptions between 1000 and 1500 cm"l. These narrow absorption bands arise from formaldehyde that is retained in salt crystals in the film. These distinctive absorptions are not present if the cell suspension is washed with isotonic... 

In addition to chemical reactions, the isokinetic relationship can be applied to various physical processes accompanied by enthalpy change. Correlations of this kind were found between enthalpies and entropies of solution (20, 83-92), vaporization (86, 91), sublimation (93, 94), desorption (95), and diffusion (96, 97) and between the two parameters characterizing the temperature dependence of thermochromic transitions (98). A kind of isokinetic relationship was claimed even for enthalpy and entropy of pure substances when relative values referred to those at 298° K are used (99). Enthalpies and entropies of intermolecular interaction were correlated for solutions, pure liquids, and crystals (6). Quite generally, for any temperature-dependent physical quantity, the activation parameters can be computed in a formal way, and correlations between them have been observed for dielectric absorption (100) and resistance of semiconductors (101-105) or fluidity (40, 106). On the other hand, the isokinetic relationship seems to hold in reactions of widely different kinds, starting from elementary processes in the gas phase (107) and including recombination reactions in the solid phase (108), polymerization reactions (109), and inorganic complex formation (110-112), up to such biochemical reactions as denaturation of proteins (113) and even such biological processes as hemolysis of erythrocytes (114). 

Figure 15.3 (a) Heat absorption in solutions of native RNase A (trace 1) and RNase A kept in 10% buffered formalin for 2 days (trace 2) and 6 days (trace 3) at pH 7.4 and 23°C. All samples were dialyzed against 75 mM potassium phosphate buffer (pH 7.4) prior to DSC. (b) Dependence of Td of the dialyzed RNase A samples on time of incubation in 10% buffered formalin at pH 7.4 and 23°C. (c) Heat absorption of solutions of formalin-treated RNase A fractions isolated by size-exclusion gel chromatography monomer (trace 1), dimmer (trace 2), and a mixture of oligomers with >5 cross-linked proteins (trace 3). Protein concentrations were 0.5 mg/mL. The thermal denaturation transition temperature (Td) is defined as the temperature of the maximum in the excess heat absorption trace associated with the protein s endothermic denaturation transition. See Rait et al.10 for details. 

The above observations provide a clear demonstration that cosolvents in selected ranges of concentration create reversible perturbations of protein similar to those induced by other modifiers. The reversibility of the cosolvent effect is a prerequisite to cosolvent use and will depend on the concentration of cosolvent, which in turn will vary markedly with the type of solvent used. For instance, polyols can be used at concentrations up to 8 Af while methanol at 3 M causes the appearance of a new absorption band (410 nm) and, after further increases in concentration, an irreversible conversion of cytochrome P-450 into P-420. Other aliphatic alcohols cause denaturation at much lower concentrations. 

A number of investigators have studied the effect of ozone on the ultraviolet absorption spectra of proteins and amino acids. A decrease in the absorption of 280-nm light in a number of proteins was originally reported ly Giese et aV to be a consequence of ozone exposure they suggested that this was due to an interaction of ozone with the ring structures of tyrosine and tryptophan. Exposure of a solution of tryptophan to ozone resulted in a decrease in 280-nm absorption, whereas the extinction coefficient of tyrosine increased. Similar results with tyrosine were reported by Scheel et who also noted alterations in the ultraviolet spectra of egg albumen, perhaps representing denaturation by ozone. 

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