Biosynthesis pentose phosphate pathway

Vnother pathway of glucose catabolism, the pentose phosphate pathway, is the primary source of N/ E)PH, the reduced coenzyme essential to most reductive biosynthetic processes. For example, N/VDPH is crucial to the biosynthesis of... 

This enzyme interconverts ribulose-5-P and ribose-5-P via an enediol intermediate (Figure 23.30). The reaction (and mechanism) is quite similar to the phosphoglucoisomerase reaction of glycolysis, which interconverts glucose-6-P and fructose-6-P. The ribose-5-P produced in this reaction is utilized in the biosynthesis of coenzymes (including N/ DH, N/ DPH, F/ D, and Big), nucleotides, and nucleic acids (DNA and RNA). The net reaction for the first four steps of the pentose phosphate pathway is... 

MORE NADPH THAN RmOSE-5-P IS NEEDED BY THE CELL Large amounts of N/VDPH can be supplied for biosynthesis without concomitant production of ribose-5-P, if ribose-5-P produced in the pentose phosphate pathway is recycled to produce glycolytic intermediates. As shown in Figure 23.39, this alternative involves a complex interplay between the transketolase and transaldolase reac-... 

The hexose monophosphate pathway has several names just to confuse you. It s called the hexose monophosphate shunt or pathway (HMP shunt or pathway), or the pentose phosphate pathway, or the phospho-gluconate pathway (Fig. 15-1). The pathway in its full form is complicated and has complicated stoichiometry. Usually it s not necessary to remember all of it. The important points are that it makes NADPH for biosynthesis and riboses (C-5 sugars) for DNA and RNA synthesis. 

T) Pentose phosphate pathway Gluconeogenesis Glycolysis P-Oxidation (5) Fatty acid biosynthesis Tricarboxylic acid cycle (7) Urea cycle... 

The pentose phosphate pathway (PPP, also known as the hexose monophosphate pathway) is an oxidative metabolic pathway located in the cytoplasm, which, like glycolysis, starts from glucose 6-phosphate. It supplies two important precursors for anabolic pathways NADPH+H+, which is required for the biosynthesis of fatty acids and isopren-oids, for example (see p. 168), and ribose 5-phosphate, a precursor in nucleotide biosynthesis (see p. 188). 

The first step is carboxylation of acetyl CoA to malonyl CoA. This reaction is catalyzed by acetyl-CoA carboxylase [5], which is the key enzyme in fatty acid biosynthesis. Synthesis into fatty acids is carried out by fatty acid synthase [6]. This multifunctional enzyme (see p. 168) starts with one molecule of ace-tyl-CoA and elongates it by adding malonyl groups in seven reaction cycles until palmi-tate is reached. One CO2 molecule is released in each reaction cycle. The fatty acid therefore grows by two carbon units each time. NADPH+H is used as the reducing agent and is derived either from the pentose phosphate pathway (see p. 152) or from isocitrate dehydrogenase and malic enzyme reactions. 

In eukaryotes, the cytoplasm, representing slightly more than 50% of the cell volume, is the most important cellular compartment. It is the central reaction space of the cell. This is where many important pathways of the intermediary metabolism take place—e.g., glycolysis, the pentose phosphate pathway, the majority of gluconeogenesis, and fatty acid synthesis. Protein biosynthesis (translation see p. 250) also takes place in the cytoplasm. By contrast, fatty acid degradation, the tricarboxylic acid cycle, and oxidative phosphorylation are located in the mitochondria (see p. 210). 

Alkaloid biosynthesis needs the substrate. Substrates are derivatives of the secondary metabolism building blocks the acetyl coenzyme A (acetyl-CoA), shikimic acid, mevalonic acid and 1-deoxyxylulose 5-phosphate (Figure 21). The synthesis of alkaloids starts from the acetate, shikimate, mevalonate and deoxyxylulose pathways. The acetyl coenzyme A pathway (acetate pathway) is the source of some alkaloids and their precursors (e.g., piperidine alkaloids or anthraniUc acid as aromatized CoA ester (antraniloyl-CoA)). Shikimic acid is a product of the glycolytic and pentose phosphate pathways, a construction facilitated by parts of phosphoenolpyruvate and erythrose 4-phosphate (Figure 21). The shikimic acid pathway is the source of such alkaloids as quinazoline, quinoline and acridine. 

NADPH provides reducing power for biosynthetic reactions, and ribose 5-phosphate is a precursor for nucleotide and nucleic acid synthesis. Rapidly growing tissues and tissues carrying out active biosynthesis of fatty acids, cholesterol, or steroid hormones send more glucose 6-phosphate through the pentose phosphate pathway than do tissues with less demand for pentose phosphates and reducing power. 

In hepatocytes and adipocytes, cytosolic NADPH is largely generated by the pentose phosphate pathway (see Fig. 14-21) and by malic enzyme (Fig. 21-9a). The NADP-linked malic enzyme that operates in the carbon-assimilation pathway of C4 plants (see Fig. 20-23) is unrelated in function. The pyruvate produced in the reaction shown in Figure 21-9a reenters the mitochondrion. In hepatocytes and in the mammary gland of lactating animals, the NADPH required for fatty acid biosynthesis is supplied primarily by the pentose phosphate pathway (Fig. 21-9b). 

FIGURE 22-9 Overview of amino acid biosynthesis. The carbon skeleton precursors derive from three sources glycolysis (pink), the citric acid cycle (blue), and the pentose phosphate pathway (purple). 

The oxidative portion of the pentose phosphate pathway consists of three reactions that lead to the formation of ribulose 5-phosphate, C02, and two molecules of NADPH for each molecule of glucose 6-phosphate oxidized (Figure 13.2). This portion of the pathway is particularly important in the liver and lactating mammary glands, which are active in the biosynthesis of fatty acids, in the adrenal cortex, which is active in the NADPH-dependent synthesis of steroids, and in erythrocytes, which require NADPH to keep glutathione reduced. 

As a general rule, NAD+ is associated with catabolic reactions and it is somewhat unusual to find NADP+ acting as an oxidant. However, in mammals the enzymes of the pentose phosphate pathway are specific for NADP+. The reason is thought to lie in the need of NADPH for biosynthesis (Section I). On this basis, the occurrence of the pentose phosphate pathway in tissues having an unusually active biosynthetic function (liver and mammary gland) is understandable. 

In these tissues the cycle may operate as indicated in Fig. 17-8A with the C3 product also being used in biosynthesis. Furthermore, any of the products from C4 to C7 may be withdrawn in any desired amounts without disrupting the smooth operation of the cycle. For example, the C4 intermediate erythrose 4-P is required in synthesis of aromatic amino acids by bacteria and plants (but not in animals). Ribose 5-P is needed for formation of several amino acids and of nucleic acids by all organisms. In some circumstances the formation of ribose 5-P may be the only essential function for the pentose phosphate pathway.120... 

Figure 17-8 The pentose phosphate pathways. (A) Oxidation of a hexose (C6) to three molecules of C02 and a three-carbon fragment with the option of removing C3, C4, C5, and C7 units for biosynthesis (dashed arrows). (B) Non-oxidative pentose pathways 2 1/2 C6 —> 3 C5 or 2 C6 —> 3 C4 or 3 V2C6 —> 3 C7.

The pentose phosphate pathway serves a variety of functions (1) the production of NADPH for biosynthesis (2) the production of ribose, required mainly for nucleic acid synthesis, and (3) the interconversion of a variety of phosphorylated sugars. 

Role of the Pentose Phosphate Pathway If the oxidation of glucose 6-phosphate via the pentose phosphate pathway were being used primarily to generate NADPH for biosynthesis, the other product, ribose 5-phosphate, would accumulate. What problems might this cause ... 

Answer The reductive pentose phosphate pathway regenerates ribulose 1,5-bisphosphate from triose phosphates produced during photosynthesis, in a series of reactions involving sugars of three, four, five, six, and seven carbons and the enzymes transaldolase and transketo-lase. The oxidative pentose phosphate pathway plays a different metabolic role it provides NADPH for reductive biosynthesis and pentose phosphates for nucleotide synthesis. 

Some mammalian cells have the ability to metabolize glucose 6-phosphate in a pathway that involves the production of C3, C4, C5, C6, and C7 sugars. This process also yields the reduced coenzyme, NADPH, which is oxidized in the biosynthesis of fatty acids and steroids (Chap. 13). Consequently, this metabolic pathway is of major importance in those cells involved in fatty acid and steroid production, such as the liver, lactating mammary gland, adrenal cortex, and adipose tissue. The pentose phosphate pathway, which does not require oxygen and which occurs in the cytoplasm of these cells, has two other names the phosphogluconate pathway (after the first product in the pathway) and the hexose monophosphate shunt (since the end products of the pathway can reenter glycolysis). 

Stryer, L. (1995). Pentose Phosphate Pathway and Glu-coneogenesis Biosynthesis of Amino Acids and Heme. In Biochemistry, 4th ed. New York Freeman. 

Shetty, K. 2004. Role of proline-linked pentose phosphate pathway in biosynthesis of plant phenolies for functional food and environmental applications a review. Proc. Biochem. 39 789-803. 

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