Nucleophilic attack initiation kinetics

Example You could explore the possible geometries of two molecules interacting in solution and guess at initial transition structures. For example, if molecule Aundergoes nucleophilic attack on molecule B, you could impose a distance restraint between the two atoms that would form a bond, allowing the rest of the system to relax. Simulations such as these can help to explain stereochemistry or reaction kinetics and can serve as starting points for quantum mechanics calculations and optimizations. 

No single mechanism accounts for all the reactions. One pathway involves a concerted one-step process involving a cyclic transition state. This of necessity affords a c -product. Another possibility, more favoured in polar solvents, involves a cationic 5-coordinate intermediate [IrX(A)(CO)L2]+, which undergoes subsequent nucleophilic attack by B-. Other possibilities include a SN2 route, where the metal polarizes AB before generating the nucleophile, and radical routes. Studies are complicated by the fact that the thermodynamically more stable isolated product may not be the same as the kinetic product formed by initial addition. 

As with chlorine-containing oxidants, JV-bromo species have been used to oxidize sulphoxides to sulphones (with no bromine incorporation) through the initial formation of a bromosulphonium ion, by nucleophilic attack of the sulphoxide sulphur atom on the electrophilic halogen atom. Such reactions involve JV-bromosuccinimide ° bromamine-T, iV-bromoacetamide ° and iV-bromobenzenesulphonamide. All reported studies were of a kinetic nature and yields were not quoted. In acid solution all oxidations occurred at or around room temperature with the nucleophilic attack on the electrophilic bromine atom being the rate-limiting step. In alkaline solution a catalyst such as osmium tetroxide is required for the reaction to proceed . ... 

The latter results have been explained on the basis of the following reaction scheme. The 1,2-regioisomers derived from butadiene are obtained through a non-symmetrical iodonium ion intermediate. The subsequent nucleophilic attack on the allylic position gives, under kinetic control, 1,2-derivatives. Nevertheless, when poorer nucleophiles such as benzene or acetonitrile are employed, the conversion of the initially formed iodonium ion into the allylic cation has been suggested to give 1,4-products, under thermodynamic control. However, other alternatives like nucleophilic attack involving allylic participation have not been excluded for the formation of 1,4-derivatives. 

Divalent dissolution is initiated by a hole from the bulk approaching the silicon-electrolyte interface which allows for nucleophilic attack of the Si atom (step 1 in Fig. 4.3). This is the rate-limiting step of the reaction and thereby the origin of pore formation, as discussed in Chapter 6. The active species in the electrolyte is HF, its dimer (HF)2, or bifluoride (HF2), which dissociates into HF monomers and l ions near the surface [Okl]. The F ions in the solution seem to be inactive in the dissolution kinetics [Se2], Because holes are only available at a certain anodic bias, the Si dissolution rate becomes virtually zero at OCP and the surface remains Si-H covered in this case, which produces a hydrophobic silicon surface. 

The voltammetric reduction of a series of dialkyl and arylalkyl disulfides has recently been studied in detail, in DMF/0.1 M TBAP at the glassy carbon electrode The ET kinetics was analyzed after addition of 1 equivalent of acetic acid to avoid father-son reactions, such as self-protonation or nucleophilic attack on the starting disulfide by the most reactive RS anion. Father-son reactions have the consequence of lowering the electron consumption from the expected two-electron stoichiometry. Addition of a suitable acid results in the protonation of active nucleophiles or bases. The peak potentials for the irreversible voltammetric reduction of disulfides are strongly dependent on the nature of the groups bonded to the sulfur atoms. Table 11 summarizes some relevant electrochemical data. These results indicate that the initial ET controls the electrode kinetics. In addition, the decrease of the normalized peak current and the corresponding increase of the peak width when v increases, point to a potential dependence of a, as discussed thoroughly in Section 2. 

Scheme 43 shows the details of the different steps involved in the equilibrium. The nucleophilic attack of the P(III) derivative on the acetylenic bond yields a 1,3-dipole which, after a fast protonation, frees aZ ion. If the subsequent addition of this ion occurs on the P atom (reaction a), a P(V) phosphorane is formed, but the addition of Z on the ethylenic C atom (reaction b) results in the formation of an ylide. Both of these reactions occur under kinetic control and, in both cases, X is always an OR group from the initial acetylene dicarboxylic ester. When the acetylenic compound is a diketone and X is an alkyl or aryl moiety, the C=0 group is much more electrophilic and the attack by the Z ion produces an alcoholate (reaction c), a new intermediate which can cyclize on to the P+ to form a phosphorane, or attack the a-C atom to form an ylide as in Scheme 42. Hence, reactions a and c can coexist, and are strongly dependent on the nature of the trapping reagent and of the P compound, but reaction b is blocked, whatever the reagent. This is well illustrated by the reaction of the 2-methoxytetramethylphospholane 147 on diben-zoylacetylene in the presence of methanol as trapping reagent. The proportions of the vinylphosphorane 157 and spirophosphorane 158 formed (Figure 24) are 13% and 84%, respectively.

Ring fluorination of pyridine and its benzo derivatives is suggested to occur through nucleophilic attack of fluoride ion on an initial pyridine fluorine complex (87TL255, 91BCJ1081, 93AHC(58)29l). In electron-deficient pyridines and their benzo derivatives, fluorination on the pyridine ring is kinetically competitive with annular and side chain fluorination. 

In the course of mechanistic studies it was established that aniline does not react with the cyclopropenones (153 and 154) even under reflux conditions. It was therefore assumed that the formation of (158) involves initial nucleophilic attack by the aminopyridine ring nitrogen on the electrophilic cyclopropenone ring. In this way 155 is formed, which is then transformed via the reactive intermediates (156, 157, and/or 161) to the prodticts. Kascheres et al. noted that the formation of 157 is formally a stereospecific trans addition of the 2-aminopyridines to the double bond of the cyclopropenone (153). Such sterospecificity has been observed in kinetically controlled Michael additions. 

The results in Table 3 were explained as shown in Scheme 4. From the fact that no kinetic isotope effect was observed in the reaction of phenyl-substituted disilenes with alcohols (Table 1), it is assumed that the addition reactions of alcohols to phenyltrimethyl-disilene proceed by an initial attack of the alcoholic oxygen on silicon (nucleophilic attack at silicon), followed by fast proton transfer via a four-membered transition state. As shown in Scheme 4, the regioselectivity is explained in terms of the four-membered intermediate, where stabilization of the incipient silyl anion by the phenyl group is the major factor favoring the formation of 26 over 27. It is well known that a silyl anion is stabilized by aryl group(s)443. Thus, the product 26 predominates over 27. However, it should be mentioned that steric effects also favor attack at the less hindered SiMe2 end of the disilene, thus leading to 26. 

Scheme 61, yielded thiazole 200 as the major product, along with minor amounts of carbinol 201 [152]. On the other hand, treatment of the imine formed from 199 and p-methoxyphenylamine with catalytic tetrabutylammonium cyanide, produced suc-cinimide derivative 202. In both cases, the process is initiated by nucleophilic attack to the carbaldehyde C=0 (or azomethine s C=N) group, which is followed up by an anionic rearrangement. A variation of the above process using as catalysts /V-heterocyclic carbenes (NHC) derived from base treatment of azolium, imidazo-lium, or triazolium salts, has also been developed to access gem-disubstituted succinimides [153, 154]. Unfortunately, an attempt of kinetic resolution of racemic 4-formyl (3-lactams by using chiral NHC resulted in moderate selectivities only [154]. 

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