Matrix-assisted laser desorption techniques

Some solid materials are very intractable to analysis by standard methods and cannot be easily vaporized or dissolved in common solvents. Glass, bone, dried paint, and archaeological samples are common examples. These materials would now be examined by laser ablation, a technique that produces an aerosol of particulate matter. The laser can be used in its defocused mode for surface profiling or in its focused mode for depth profiling. Interestingly, lasers can be used to vaporize even thermally labile materials through use of the matrix-assisted laser desorption ionization (MALDI) method variant. 

The three techniques — laser desorption ionization, laser ablation with secondary ionization, and matrix-assisted laser desorption — are all used for mass spectrometry of a wide variety of substances from rock, ceramics, and bone to proteins, peptides, and oligonucleotides. 

Two relatively new techniques, matrix assisted laser desorption ionization-lime of flight mass spectrometry (MALDI-TOF) and electrospray ionization (FS1), offer new possibilities for analysis of polymers with molecular weights in the tens of thousands. PS molecular weights as high as 1.5 million have been determined by MALDI-TOF. Recent reviews on the application of these techniques to synthetic polymers include those by Ilantoif54 and Nielen.555 The methods have been much used to provide evidence for initiation and termination mechanisms in various forms of living and controlled radical polymerization.550 Some examples of the application of MALDI-TOF and ESI in end group determination are provided in Table 3.12. The table is not intended to be a comprehensive survey. 

Mass spectroscopy is a useful technique for the characterization of dendrimers because it can be used to determine relative molar mass. Also, from the fragmentation pattern, the details of the monomer assembly in the branches can be confirmed. A variety of mass spectroscopic techniques have been used for this, including electron impact, fast atom bombardment and matrix-assisted laser desorption ionization (MALDI) mass spectroscopy. 

Matrix-assisted laser desorption ionization (MALDI) is not yet a technique that has been used extensively for LC-MS applications. It is included here because it often provides analytical information complementary to that obtained from LC-MS with electrospray ionization, as illustrated later in Chapter 5. 

Due to the high mass, low volatility, and thermal instability of chlorophylls and derivatives, molecular weight determination by electron impact (El) MS is not recommended. Desorption-ionization MS techniques such as chemical ionization, secondary ion MS, fast-atom bombardment (FAB), field, plasma- and matrix-assisted laser desorption have been very effective for molecular ion detection in the characterization of tetrapyrroles. These techniques do not require sample vaporization prior to ionization and they are effective tools for allomerization studies. 

For non-volatile sample molecules, other ionisation methods must be used, namely desorption/ionisation (DI) and nebulisation ionisation methods. In DI, the unifying aspect is the rapid addition of energy into a condensed-phase sample, with subsequent generation and release of ions into the mass analyser. In El and Cl, the processes of volatilisation and ionisation are distinct and separable in DI, they are intimately associated. In nebulisation ionisation, such as ESP or TSP, an aerosol spray is used at some stage to separate sample molecules and/or ions from the solvent liquid that carries them into the source of the mass spectrometer. Less volatile but thermally stable compounds can be thermally vaporised in the direct inlet probe (DIP) situated close to the ionising molecular beam. This DIP is standard equipment on most instruments an El spectrum results. Techniques that extend the utility of mass spectrometry to the least volatile and more labile organic molecules include FD, EHD, surface ionisation (SIMS, FAB) and matrix-assisted laser desorption (MALD) as the last... 

As evident from Scheme 7.13, most modern ionisation techniques have been used for TLC-MS, and no single ionisation method is used exclusively with TLC-MS. Various ionisation methods may be applied that avoid the need to evaporate the sample into an El or Cl source these are based in particular on sputtering (FAB, SIMS) or laser desorption. Several sputtering methods of ionisation do not require the use of a liquid matrix, e.g. TLC-SIMS [797], Recent developments include the use of matrix-assisted laser desorption ionisation (MALDI) and surface-assisted laser desorption ionisation (SALDI). It is obvious that TLC-MS is complemented with TLC-MS11 [800] and TLC-HRMS techniques. Table 7.82 lists the general characteristics of TLC-MS. 

The focus of this chapter is the development of a technique often called wholecell matrix-assisted laser desorption ionization (MALDI) time-of-flight (TOF) mass spectrometry (MS) or whole-cell MALDI-TOF MS. Some groups prefer to use terms such as intact or unprocessed rather than whole, but the intended meaning is the same regardless of which word is used. As noted in the first chapter of this book, there are many different methods for the analysis of bacteria. However, for the analysis of intact or unprocessed bacteria, whole-cell MALDI-TOF MS is the most commonly used approach. This method is very rapid. MALDI-TOF MS analysis of whole cells takes only minutes because the samples can be analyzed directly after collection from a bacterial culture suspension. Direct MALDI MS analysis of fungi or viruses is similar in approach1,2 but is not covered in this chapter. MALDI-TOF MS of whole cells was developed with very rapid identification or differentiation of bacteria in mind. The name (whole cell) should not be taken to imply that the cells are literally intact or whole. Rather, it should be taken to mean that the cells that have not been treated or processed in any way specifically for the removal or isolation of any cellular components from any others. In whole-cell analysis the cells have been manipulated only as necessary to... 

Experimental considerations Sample preparation and data evaluation are similar to membrane osmometry. Since there is no lower cut-off as in membrane osmometry, the method is very sensitive to low molar mass impurities like residual solvent and monomers. As a consequence, the method is more suitable for oligomers and short polymers with molar masses up to (M)n 50kg/mol. Today, vapour pressure osmometry faces strong competition from mass spectrometry techniques such as matrix-assisted laser desorption ionisation mass spectrometry (MALDI-MS) [20,21]. Nevertheless, vapour pressure osmometry still has advantages in cases where fragmentation issues or molar mass-dependent desorption and ionization probabilities come into play. 

The most discriminating technique for proving the identity and purity of analyte peak of a chromatogram, especially for analyzing biological samples and natural products, is by using online LC-UV/MS or GC-MS/FTIR methods [15]. Alternatively, one could use a combination of TLC and MS, where direct determination on the TLC plates is made by matrix-assisted laser desorption ionization mass spectrometry (MALDI MS) [16]. 

Sugiura Y, Shimma S, Setou M. Two-step matrix application technique to improve ionization efficiency for matrix-assisted laser desorption/ionization in imaging mass spectrometry. Anal. Chem. 2006 78 8227-8235. 

In a separate study, a protocol for Matrix-assisted laser desorption-ionization (MALDI) imaging mass spectrometry (IMS) has been proposed.18 This IMS technique provides a new approach to visualize spatial distribution of thousands of molecular species, including peptides, proteins, and their metabolites in two- or three-dimensional levels. This approach may also provide a straightforward method of determining the tissue distribution of multiple peptides or proteins in a quantitative manner.18 Chu et al.19 reported a nondestructive molecular extraction method to obtain proteins from a single FFPE or frozen tissue section, without destroying the tissue morphology, such... 

The growing interest for the identification and characterization of polar and large compounds caused the development and the introduction of new ionization techniques, such as electrospray ionization (ESI)[4], and matrix assisted laser desorption ionization (MALDI),[5] and their more recent improvements, thus establishing new MS based approaches for studying large molecules, polymers and biopolymers, such as proteins, carbohydrates, nucleic acids. 

Over the years, a lot of desorption ionization techniques have been introduced to MS, such as plasma desorption, field desorption, laser desorption, secondary ion mass spectrometry, fast atom bombardment, matrix assisted laser desorption and desorption electrospray ionization. Most of them are actually no longer used. In the following paragraphs, both matrix assisted laser desorption (MALDI) and desorption electrospray ionization (DESI) will be discussed. 

Mass spectrometry is used to identify unknown compounds by means of their fragmentation pattern after electron impact. This pattern provides structural information. Mixtures of compounds must be separated by chromatography beforehand, e.g. gas chromatography/mass spectrometry (GC-MS) because fragments of different compounds may be superposed, thus making spectral interpretation complicated or impossible. To obtain complementary information about complex mixtures as a whole, it may be advantageous to have only one peak for each compound that corresponds to its molecular mass ([M]+). Even for thermally labile, nonvolatile compounds, this can be achieved by so-called soft desorption/ionisation techniques that evaporate and ionise the analytes without fragmentation, e.g. matrix-assisted laser desorption/ionisation mass spectrometry (MALDI-MS). 

Other MS based analytical approaches have occasionally been applied to ancient resin samples, in particular for paint varnishes. Such techniques include FABS (fast atom bombardment mass spectrometry) [35], MALDI (matrix assisted laser desorption-ionization mass spectrometry) and GALDI (graphite assisted laser desorption-ionization mass spectrometry) [36 38]. 

The second advantage is the possibility of performing chemical imaging analyses. Even if other techniques, such as matrix-assisted laser desorption/ionization, also allow images to be acquired, ToF-SIMS is, for now, the mass spectrometric technique with the best spatial resolution performance. 

A modified version of 2DE and gel image analysis, with silver staining, autoradiography, and protein identification and measurement of peptide mass, uses matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) as a rapid and sensitive technique for identifying peptides. MALDI-TOF-MS applies well to protein detection in biological fluids.56 A second advantage of this technique is... 

Matrix-assisted laser desorption/ionization (MALDI) was developed by Karas, Hillenkamp, and coworkers in the late 1980s [161-163]. At the same time, a related technique was introduced by Tanaka et al. and involved mixing of the analyte with a very finely ground metal powder [164],... 

Figure 2.9. Schematic of a matrix-assisted laser desorption/ionization (MALDI) event. The SEM micrograph depicts sinapinic acid-equine myoglobin crystal from a sample prepared according to the dried drop sample preparation method. In the desorption event neutral matrix molecules (M), positive matrix ions (M+), negative matrix ions (M-), neutral analyte molecules (N), positive analyte ions (+), and negative analyte ions (-) are created and/or transferred to the gas phase. Reprinted from A. Westman-Brinkmalm and G. Brinkmalm (2002). In Mass Spectrometry and Hyphenated Techniques in Neuropeptide Research, J. Silberring and R. Ekman (eds.) New York John Wiley Sons, 47-105. With permission of John Wiley Sons, Inc.

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