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Hydration shell water molecules

A fourth solvent structural effect refers to the average properties of solvent molecules near the solute. These solvent molecules may have different bond lengths, bond angles, dipole moments, and polarizabilities than do bulk solvent molecules. For example, Wahlqvist [132] found a decrease in the magnitude of the dipole moment of water molecules near a hydrophobic wall from 2.8 D (in their model) to 2.55 D, and van Belle et al. [29] found a drop from 2.8 D to 2.6 D for first-hydration-shell water molecules around a methane molecule. [Pg.17]

Surprisingly, the low solubility of small-sized particles does not stem from a weak interaction of particles with their surrounding water environment (77). For example, the heat of solvation of methane in water at ambient temperature is of similar magnitude as the heat of vaporization of pure liquid methane (80). The positive solvation free energy of small apolar particles at low temperatures is the consequence of negative solvation entropy, which overcompensates for the negative solvation enthalpy. It is widely believed that this entropy penalty is caused by the orientation order introduced to the hydration-shell water molecules as they try to maintain an intact hydrogen bond network (77). Parallel to the entropy decrease observed for low... [Pg.1918]

Figure 4-12. The water network in a single tube (top and side views). The top view (left) shows 8 bridging water molecules in red, 8 first-hydration shell water molecules in blue, 12 second-hydration shell water molecules in yellow, and 4 third-hydration shell water molecules in gray, while the side view shows twice those in the top view. Reproduced by permission of American Chemical Society Ref. [54]. Figure 4-12. The water network in a single tube (top and side views). The top view (left) shows 8 bridging water molecules in red, 8 first-hydration shell water molecules in blue, 12 second-hydration shell water molecules in yellow, and 4 third-hydration shell water molecules in gray, while the side view shows twice those in the top view. Reproduced by permission of American Chemical Society Ref. [54].
Figure 11.2. Translational and rotational dynamics of water molecules determined by computer simulations in complexed form (solid line) wifli protein and DNA as well as in the free component (dashed Une). (a) Mean-square displacements (MSDs) of water moleeules residing in the first hydration shell, water molecules in the major and minor groove regions of the DNA, and water molecules present in the common region of the eomplex are calculated and shown in the figure for both the complexed form and the tree form, (b) The reorientational time correlation fimction, Cp (t), derived for the same water moleeules located as mentioned above both in complexed and fi ee forms of protein and DNA. The comparison with the pure bulk state is also highlighted in both figures. Adapted with permission fiom Nature Struct. Mol Biol, 16 (2009), 1224. Copyright (2009) Nature Publishing Group. Figure 11.2. Translational and rotational dynamics of water molecules determined by computer simulations in complexed form (solid line) wifli protein and DNA as well as in the free component (dashed Une). (a) Mean-square displacements (MSDs) of water moleeules residing in the first hydration shell, water molecules in the major and minor groove regions of the DNA, and water molecules present in the common region of the eomplex are calculated and shown in the figure for both the complexed form and the tree form, (b) The reorientational time correlation fimction, Cp (t), derived for the same water moleeules located as mentioned above both in complexed and fi ee forms of protein and DNA. The comparison with the pure bulk state is also highlighted in both figures. Adapted with permission fiom Nature Struct. Mol Biol, 16 (2009), 1224. Copyright (2009) Nature Publishing Group.
Complexity in the conduction of protons encompasses (1) dissociation of the proton from the acidic site (2) subsequent transfer of the proton to the first hydration shell water molecules (3) separation of the hydrated proton from the conjugate base e.g. the sulfonate anion) and finally (4) diffusion of the protons in the media consisting of confined water and tethered sulfonates within the polymeric matrix. Hence, we will endeavor to discuss the insight from theoretical modeling into these four aspects. [Pg.389]

The first hydration shell water molecules for the multivalent ions have practically infinite residence times, much longer than the duration of the simulations (tens of ps) can follow their movements. The relative mean residence times of water molecules near the ions are roughly proportional to the surface density of the charge on the ions. In fact, the RMRT = 0.22-n 1.14(ai/C nm ), but exceptions are noted. It must be stressed, though, that the relative residence times depend strongly on the computational method. A further point to be noted is that the duration of the simulation runs is much too short to allow for hydrolysis of the ions that certainly takes place for tri- and quadrivalent cations. [Pg.114]

Fig. 1.5 A scheme of hydration (1) cation, (2) primary hydration sheath (water molecules form a tetrahedron), (3) secondary hydration shell, (4) disorganized water, (5) normal water... [Pg.31]

The ion-water interactions are very strong Coulomb forces. As the hydrated ion approaches the solution/metal interface, the ion could be adsorbed on the metal surface. This adsorption may be accompanied by a partial loss of coordination shell water molecules, or the ion could keep its coordination shell upon adsorption. The behavior will be determined by the competition between the ion-water interactions and the ion-metal interactions. In some cases, a partial eharge transfer between the ion and the metal results in a strong bond, and we term this process chemisorption, in contrast to physisorption, which is much weaker and does not result in substantial modification of the ion s electronic structure. In some cases, one of the coordination shell molecules may be an adsorbed water molecule. hi this case, the ion does not lose part of the coordination shell, but some reorganization of the coordination shell molecules may occur in order to satisfy the constraint imposed by the metal surface, especially when it is charged. [Pg.145]

In the calculations of the energy of hydration of metal complexes in the inner coordination sphere, one must consider hydrogen bond formation between the first-shell water molecules and those in bulk water, which leads to chains of hydrogen-bonded water molecules. Such hydrogen-bonded chains of ethanol molecules attached to the central metal ion have been found as a result of DFT B3LYP calculations on ethanol adducts to nickel acetylacetonate, where the calculated energy of hydrogen bonds correlated well with experimental data [90]. [Pg.697]

The hydrated ion may be pictured as having a small number — possibly four or six — of water molecules firmly held in contact with the ion and constituting an inner shell, and a larger, less well defined, number more loosely held in an outer shell. Round a cation the inner shell water molecules are probably bonded by the strong ion-dipole force which operates when the water molecule is held in some such position as is indicated in formula (8). Anions are usually less hydrated than cations. The inner shell water molecules may not fit so well. Probably they are hydrogen bonded as shown in (9). In all cases, the outer shell water molecules are supposed to be hydrogen bonded to those of the inner shell. [Pg.30]

In that respect, then, the polarizable continuum estimate of hydration energy of these entities is considerably smaller than the quantum mechanical interaction energy of the molecule plus the appropriate number of first-shell water molecules. In this vein, then, it would be highly inaccurate to equate the interaction energy of a molecule such as imidazole with the molecules in its first solvation shell to the entire solvation energy when computed by a continuum approach. [Pg.426]

Figure 7.2 Quasi-chemical contributions of the hydration free energy of Be (aq). Cluster geometries were optimized using the B3LYP hybrid density functional (Becke, 1993) and the 6-31- -G(d, p) basis set. Frequency calculations confirmed a true minimum, and the zero point energies were computed at the same level of theory. Single-point energies were calculated using the 6-311- -G(2d, p) basis set. A purely inner-shell n = 5 cluster was not found the optimization gave structures with four (4) inner-sphere water molecules and one (1) outer-sphere water molecule. For n = 6 both a purely inner-shell configuration, and a structure with four (4) inner-shell and two (2) outer-shell water molecules were obtained. The quasi-chemical theory here utilizes only the inner-shell structure. O - rin [/ff -f (left ordinate) vs. n. A ... Figure 7.2 Quasi-chemical contributions of the hydration free energy of Be (aq). Cluster geometries were optimized using the B3LYP hybrid density functional (Becke, 1993) and the 6-31- -G(d, p) basis set. Frequency calculations confirmed a true minimum, and the zero point energies were computed at the same level of theory. Single-point energies were calculated using the 6-311- -G(2d, p) basis set. A purely inner-shell n = 5 cluster was not found the optimization gave structures with four (4) inner-sphere water molecules and one (1) outer-sphere water molecule. For n = 6 both a purely inner-shell configuration, and a structure with four (4) inner-shell and two (2) outer-shell water molecules were obtained. The quasi-chemical theory here utilizes only the inner-shell structure. O - rin [/ff -f (left ordinate) vs. n. A ...
Salts, ions, and ionic liquids in water are widely studied in AIMD. Several anions [165-172], cations [153, 165, 173-182], and ion pairs [164, 183, 184], as weU as ionic hquids ion pairs [185] in water were studied using AIMD. In all cases structural as well as dynamical properties of the ion s hydration shell were examined. In some cases the influence of the solvated ions on the water molecules were studied within the Wannier approach. In general, little effect of the halogen ions on the dipole moments of the water molecules in the first hydration shell was observed, while further water molecules remain unaffected. In contrast to this, it was observed that cations increase the dipole moments of the first hydration shell water by approximately 0.2-0.5 D. The second hydration shell and the bulk phase water molecules were mostly unaffected with regard to the dipole moment by the cations as well [91]. [Pg.141]

When hydrophobic hydration dominates, water molecules are loosely bonded to the ion and the radius of the primary hydration shell is large, allowing more water molecules to be accommodated. As the number of ions increases in the solution, there are fewer water molecules available to complete the cages around ions, and the cations and anions pair up to include less water molecules in their hydration shells. Therefore, the hydration number around these ions also decreases with concentration and does so more dramatically than for the Li+ ions. [Pg.112]

This result reveals that spontaneous hydrolysis of Th(OH)2 to Th(OH)3 requires a minimum of two second-sphere water molecules to enable charge separation. The proposed proton-transfer process is illustrated in Fig. 17, where proton transfer from an inner sphere water molecule in [Th(0H)2(H20)7]" results in hydrated Th(OH)3 and the hydronium ion tri-mer, [(H30)(H20)2]". In aqueous solution, the product ions are fully hydrated and the corresponding proton-transfer process is suppressed by the presence of at low pH. The results are a case where a seemingly obvious and important solution process that cannot be directly observed, hydrolysis of Th(IV), is demonstrated on a different scale in gas phase. It is notable that whereas inner shell hydration stabilizes Th(OH)2 from solution to gas, the addition of second-shell water molecules then enables charge separation, with the implication that the formation of nanodroplets containing Th(OH)2 cannot be achieved by the bottom-up approach of addition of water molecules but must rather be achieved by the top-down approach of the evaporation of water from larger droplets. [Pg.64]

Different types of problems can arise. The cation and anion are not hydrated in the same way, i.e. the orientations and spac-ings of water molecules are different. This leads to complex hydration shell interactions. It is also simple-minded to assume that the perturbation of water is necessarily of a short-range nature it may decay exponentially with correlation lengths. Unfortunately the second shell water molecules cannot be defined from the neutron diffraction data, and neither can ion-ion interactions, which is remarkable. There are different ways in which the hydrated ions can interact there may be net repulsions when they interact, but the Debye-Huckel theory does not account for the orientation of solvent molecules, and whether there might be additional repulsions or attractions due to hydration. The more recent theories do include such effects and they can account quite well for the properties of electrolytes in solution. [Pg.104]

In general, anions are less strongly hydrated than cations, but recent neutron diffraction data have indicated that even around the halide ions there is a well defined primary hydration shell of water molecules, which, in... [Pg.567]

The complete hydration shell of the proton consists of both the central FI O unit and fiirther associated water molecules mass spectrometric evidence would suggest that a total of four water molecules fomr the actual FIgOj unit, givmg a hydration number of four for the proton. Of course, the measurement of this number by... [Pg.574]

The hydration shell is formed with the increasing of the water content of the sample and the NA transforms from the unordered to A- and then to B form, in the case of DNA and DNA-like polynucleotides and salt concentrations similar to in vivo conditions. The reverse process, dehydration of NA, results in the reverse conformational transitions but they take place at the values of relative humidity (r.h.) less than the forward direction [12]. Thus, there is a conformational hysteresis over the hydration-dehydration loop. The adsorption isotherms of the NAs, i.e. the plots of the number of the adsorbed water molecules versus the r.h. of the sample at constant temperature, also demonstrate the hysteresis phenomena [13]. The hysteresis is i( producible and its value does not decrease for at least a week. [Pg.117]


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Hydratation shell

Hydrated molecules

Hydration shells

Hydration water

Water hydrates

Water hydration shells

Water molecule

Water molecule molecules

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