Elimination enzyme-catalyzed

R = H) undergoes a variety of enzyme-catalyzed free-radical intramolecular cyclization reactions, followed by late-stage oxidations, eliminations, rearrangements, and O- and N-alkylations. Working from this generalization as an organizing principle, the majority of known AmaryUidaceae alkaloids can be divided into eight stmctural classes (47). 

Cyanohydrin Synthesis. Another synthetically useful enzyme that catalyzes carbon—carbon bond formation is oxynitnlase (EC 4.1.2.10). This enzyme catalyzes the addition of cyanides to various aldehydes that may come either in the form of hydrogen cyanide or acetone cyanohydrin (152—158) (Fig. 7). The reaction constitutes a convenient route for the preparation of a-hydroxy acids and P-amino alcohols. Acetone cyanohydrin [75-86-5] can also be used as the cyanide carrier, and is considered to be superior since it does not involve hazardous gaseous HCN and also virtually eliminates the spontaneous nonenzymatic reaction. (R)-oxynitrilase accepts aromatic (97a,b), straight- (97c,e), and branched-chain aUphatic aldehydes, converting them to (R)-cyanohydrins in very good yields and high enantiomeric purity (Table 10). 

The high specificity required for the analysis of physiological fluids often necessitates the incorporation of permselective membranes between the sample and the sensor. A typical configuration is presented in Fig. 7, where the membrane system comprises three distinct layers. The outer membrane. A, which encounters the sample solution is indicated by the dashed lines. It most commonly serves to eliminate high molecular weight interferences, such as other enzymes and proteins. The substrate, S, and other small molecules are allowed to enter the enzyme layer, B, which typically consist of a gelatinous material or a porous solid support. The immobilized enzyme catalyzes the conversion of substrate, S, to product, P. The substrate, product or a cofactor may be the species detected electrochemically. In many cases the electrochemical sensor may be prone to interferences and a permselective membrane, C, is required. The response time and sensitivity of the enzyme electrode will depend on the rate of permeation through layers A, B and C the kinetics of enzymatic conversion as well as the charac-... 

Pyrimidine 5 -nucleotidase (P5N) is a unique enzyme that was recognized from studies of families with relatively common hemolytic disorders. The enzyme catalyzes the hydrolytic dephosphorylation of pyrimidine 5 -nucleotides but not purine nucleotides. The role of this enzyme is to eliminate RNA and DNA degradation products from the cytosol during erythroid maturation by conversion of nucleotide monophosphates to diffusible nucleosides. P5N is inhibited by lead, and its activity is considered to be a good indicator of lead exposure (PI). 

A second area of drug discovery and development in which enzyme reactions play a critical role is in the study of drug metabolism and pharmacokinetics. The elimination of xenobiotics, including drug molecules, from systemic circulation is driven by metabolic transformations that are entirely catalyzed by enzymes. Table 1.2 lists some of the enzyme-catalyzed transformations of xenobiotics that commonly contribute to drug molecule elimination. These biotransformation reactions... 

In simple terms, the global sulfur cycle has two components. One is biochemical involving the conversion of sulfate to sulfide and the formation of DMS the other is atmospheric photochemical oxidation of DMS to sulfur oxyacids. DMS is formed mainly in the oceans by microorganisms and to a lesser extent in plants. About 38M0 Tg year-1 of DMS are released to the atmosphere from the oceans. The major precursor for DMS formation is the sulfonium salt, dimethylsulfoniopropionate, (CH3)2 S+ CH2 CH2 COOH, DMSP. DMSP lyase enzymes catalyze an elimination of acrylic acid from DMSP (Equation 12) with the release of DMS ... 

Thus, intramolecular activation (cyclization-elimination) in this series is modulated by steric factors. In addition, hydrolysis may be enzyme-catalyzed, depending on substrates and biological conditions. 

Ring opening of 97 as indicated gives the 9-(a-amino-Q -phenylmethyl) purine 98, which by a base-catalyzed elimination of benzylideneimine is converted into 6,8-diphenyl-2-methylthiopurine 99. This pteridine-purine transformation has a close resemblance to the enzyme-catalyzed ring contraction of tetrahydropteridine into xanthine-8-carboxylic acid (64MI1), in which reaction it was proved by radioactive labeling that it is exclusively C-7 that is expelled. 

A number of methods can assist in identifying and characterizing enol intermediates (as well as eneamine and carbanion intermediates) in enzyme-catalyzed reactions. These include (1) proton isotope exchange (2) oxidation of the intermediate (3) coupled elimination (4) spectrophotometric methods (5) use of transition-state inhibitors (6) use of suicide inhibitors (7) isolation of the enol and (8) destructive analysis. 

C-3 as determined by mass spectral analysis.(55) In a mechanism involving ketone hydration prior to bindTrTg, incorporation in recovered inhibitor should be at least 50%, a value corresponding to that expected for a single cycle of nonstereospecific addition/nonstereospecific elimination of water to the ketone carbonyl. The actual results then indicate that addition-elimination is a highly stereospecific process and thus enzyme-catalyzed. 

As their name implies, the A-acetyltransferase (NAT) enzymes catalyze to a drug molecule the conjugation of an acetyl moiety derived from acetyl coenzyme A. Examples of this type of reaction are depicted in Figure 4.1. The net result of this conjugation is an increase in water solubility and increased elimination of the compound. The NATs identified to date and involved in human drug metabolism include NAT-1 and NAT-2. Little overlap in substrate specificities of the two isoforms appears to exist. NAT-2 is a polymorphic enzyme, a... 

Very detailed studies on the inhibition of alanine racemase by fluoroalanines have been conducted. This enzyme catalyzes the racemization of alanine to provide D-alanine, which is required for synthesis of the bacterial wall. This work has demonstrated that a more complex process than that represented in Figure 7.47 could intervene. For instance, in the case of monofluoroalanine, a second path (Figure 7.48, path b) occurs lysine-38 of the active site can also attack the Schiff base PLP-aminoacrylate that comes from the elimination of the fluorine atom. This enamine inactivation process (path b) has been confirmed by isolation and identification of the alkylation compound, after denaturation of the enzyme (Figure 7.48). ... 

Production of polymers contributes to pollution during synthesis and after use. A polymer produced by microorganisms is already a commercial product (Biopol). Unfortunately, however, cellular synthesis remains limited by the cost of downstream processing and the fact that the synthesis is aqueous-based, and it is impossible to perform the synthesis in the absence of a solvent. Recent research describes an enzyme-catalyzed polymer synthesis in which there is no solvent. This bulk polymerization mirrors conventional synthesis but eliminates the needs for extremes of temperature and corrosive acid catalysts. This represents the first rapid and efficient synthesis of polyesters from bulk polymerization under ambient conditions with very low concentrations of a biocatalyst (Chaudhary et al., 1997). 

The mercapturic acids and related compounds can then be exported from cells by an ATP-dependent export pump. Glutathione is a coenzyme for glyoxalase (Eq. 13-33), maleylacetoacetate isomerase (Eq. 13-20), and DDT dehydrochlorinase. The latter enzyme catalyzes elimination of HC1 from molecules of the insecticide and is especially active in DDT-resistant flies.3 Glutathione is said to be the specific factor eliciting the feeding reaction of Hydra that is, the release of glutathione from injured cells causes the little animal to engulf food. 

This evidently accounts for the presence of isoprene in the breath.34 Isoprene is also formed by many plants and is released into the atmosphere in large amounts, which contribute to photochemical formation of haze. A Mg2+-dependent enzyme catalyzes the elimination of pyrophosphate.35 Isoprene emissions rise with increasing temperature, and it has been suggested that the isoprene may dissolve in chloroplast membranes and in some way confer increased heat resistance.36 37 Hydrolytic dephosphorylation can lead to dimethylallyl alcohol, which is oxidized in the liver to dimethy-lacrylyl-CoA (Eq. 22-1). 

Deuterium and tritium isotope effect study of the methyl-methylene elimination in the enzyme catalyzed biosynthesis of (R)- and (S)- limonenes (506)... 

The mechanism and stereospecificity of the enzyme catalyzed cyclization of geranyl diphosphate, 505 to 506 and other mono- and bicyclic unsaturated products, proceeds according to the established 605-609 mechanism (equation 296) involving a transient a-terpinyl carbonation intermediate 508 (produced from 507), which by the final proton elimination step yields 506. Recent tritium tracer and KIE610 study of this terminating proton transfer supplemented the biosynthesis of 506. 

In the non-3-hydroxylation pathway, the initial step from GA] 2 alenzyme-catalyzed oxidation of carbon-7 which yields the acid, GAqg. This is followed by the loss of carbon-20 to give GAq. The mechanism for the loss of carbon-20 is still unresolved. There are several lines of evidence which eliminate a number of possible mechanisms. For instance the two oxygens in the lactone of GAq have been shown to have their origin from the 19-oic acid group of the Cgo precursor (25). 

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