Peptide insoluble

Peptide insolubility occurs when the combined inter- and intrapeptide ionic and hydrophobic interactions outweigh favourable peptide-solvent interactions. 

To illustrate the specific operations involved, the scheme below shows the first steps and the final detachment reaction of a peptide synthesis starting from the carboxyl terminal. N-Boc-glycine is attached to chloromethylated styrene-divinylbenzene copolymer resin. This polymer swells in organic solvents but is completely insoluble. ) Treatment with HCl in acetic acid removes the fert-butoxycarbonyl (Boc) group as isobutene and carbon dioxide. The resulting amine hydrochloride is neutralized with triethylamine in DMF. 

Growing ot a polypeptide chain by attachment ot the first aminoadd to an insoluble polymer and attaching successively amirx>acids At the end cleavage of the peptide from the polymer... 

Robotic peptide synthesizers are now used to automatically repeat the coupling, washing, and deprotection steps with different amino acids. Each step occurs in high yield, and mechanical losses are minimized because the peptide intermediates are never removed from the insoluble polymer until the final step. Using this procedure, up to 25 to 30 mg of a peptide with 20 amino acids can be routinely prepared. 

Peptide synthesis requires the use of selective protecting groups. An N-protected amino acid with a free carboxyl group is coupled to an O-protected amino acid with a free amino group in the presence of dicydohexvlcarbodi-imide (DCC). Amide formation occurs, the protecting groups are removed, and the sequence is repeated. Amines are usually protected as their teit-butoxy-carbonyl (Boc) derivatives, and acids are protected as esters. This synthetic sequence is often carried out by the Merrifield solid-phase method, in which the peptide is esterified to an insoluble polymeric support. 

Cyclosporine A (CsA) is a water-insoluble cyclic peptide from a fungus composed of 11 amino acids. CsA binds to its cytosolic receptor cyclophilin. The CsA/cyclophilin complex reduces the activity of the protein phosphatase calcineurin. Inhibition of this enzyme activity interrupts antigen receptor-induced activation and translocation of the transcription factor NEAT to the nucleus which is essential for the induction of cytokine synthesis in T-lymphocytes. 

The enzymes that are involved in the processing of APP into amyloid peptides are known as secretases. Beta-secretase is an enzyme that catalyzes the initial proteolytic event leading to the production of Abeta amyloid peptides. If APP is cleaved by beta-secretase it can then be further cleaved by gamma-secretase. Abeta peptides are either secreted or intracellularly released. They have varying lengths and represent intermediate degradation products of its precursor (i.e., (3-secretase cleaved APP). Especially the 42 amino acid peptide (A 342) aggregates to form insoluble amyloid plaques. 

The triethylamine salts of peptide acids are often relatively insoluble in acetonitrile or nitromethane therefore, the supersaturated solution formed on mixing the amine and the acid should be added to this reaction mixture immediately, before crystallization occurs. If crystallization does occur, the mixture should be heated to dissolve the salt, cooled rapidly, and added to the reaction mixture immediately. If it is impossible to obtain a solution of the salt, the peptide acid and then the triethylamine solution may be added separately to the reaction mixture with only a small sacrifice in yield. 

These procedures illustrate the use of N-ethyl-5-phenylisoxazolium-3 -sulfonate as a reagent for peptide synthesis.2-3 Procedure A is recommended for peptides that are not soluble in either organic solvents or in water. Procedure B illustrates the formation of a peptide that is soluble both in organic solvents and in water. Por peptides that are soluble in organic solvents and insoluble in water, the submitters recommend the use of Procedure B, except that the peptide product may be recovered directly from its solution in ethyl acetate after this organic solution has been washed successively with aqueous 5% sodium bicarbonate, water, aqueous 1 M hydrochloric acid, and water. Table I summarizes the preparation of various peptides by these procedures. Some more complex examples from other laboratories are listed elsewhere.2b... 

To prevent insolubility resulting from uncontrolled aggregation of extended strands, two adjacent parallel or antiparallel yS-peptide strands can be connected with an appropriate turn segment to form a hairpin. The / -hairpin motif is a functionally important secondary structural element in proteins which has also been used extensively to form stable and soluble a-peptide y9-sheet arrangements in model systems (for reviews, see [1, 4, 5] and references therein). The need for stable turns that can bring the peptide strands into a defined orientation is thus a prerequisite for hairpin formation. For example, type F or II" turns formed by D-Pro-Gly and Asn-Gly dipeptide sequences have been found to promote tight a-pep-tide hairpin folding in aqueous solution. Similarly, various connectors have been... 

Some divalent cations such as Cu and Pb form very stable complexes with pectate, but are unlikely to be present at sufiScient concentration in the apoplast of plants to form a major fraction of the counterions associated with the pectic fraction in vivo. The Al ion may deserve closer examination, as it is certainly able to displace Ca from cell walls and reaches substantial concentrations in plant roots under some conditions [60,61]. aluminium is not usually considered to be freely translocated, however. Basic peptides with their negative charges spaced at a similar interval to galacturonans (0.43 nm or a small multiple thereof) can in principle have a very high afiBnity for pectate [62,63], but the extensins that are associated with the most insoluble pectic fractions [M] do not appear to have this type of structure. The possibility that the non-extractable pectic polymers in most cell walls are very strongly complexed with some cation other than Ca " cannot be ruled out, but there is little evidence to support it at present. 

The role of reversed micelles in the manufacture of fine chemicals with enzymes also needs to be assessed and analysed. An outstanding example is lipase catalysed interesterification to produce cocoa butter substitute from readily available cheap materials (Luisi, 1985). This example of reversed micelles is sometimes referred to as a colloidal solution of water in organic systems. A number of water insoluble alkaloids, prostanoids, and steroids have been subjected to useful transformations (Martinek et al., 1987). Peptide synthesis has also been conducted. The advantages of two liquid phases are retained to a very great extent the amount of water can be manipulated to gain advantages from an equilibrium viewpoint. 

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