Mass spectrometry types

Separation of families by merely increasing the resolution evidently can not be used when the two chemical families have the same molecular formula. This is particularly true for naphthenes and olefins of the formula, C H2 , which also happen to have very similar fragmentation patterns. Resolution of these two molecular types is one of the problems not yet solved by mass spectrometry, despite the efforts of numerous laboratories motivated by the refiner s major interest in being able to make the distinction. Olefins are in fact abundantly present in the products from conversion processes. 

One has seen that the number of individual components in a hydrocarbon cut increases rapidly with its boiling point. It is thereby out of the question to resolve such a cut to its individual components instead of the analysis by family given by mass spectrometry, one may prefer a distribution by type of carbon. This can be done by infrared absorption spectrometry which also has other applications in the petroleum industry. Another distribution is possible which describes a cut in tei ns of a set of structural patterns using nuclear magnetic resonance of hydrogen (or carbon) this can thus describe the average molecule in the fraction under study. 

The first mass spectrometric investigation of the thiazole ring was done by Clarke et al. (271). Shortly after, Cooks et al., in a study devoted to bicydic aromatic systems, demonstrated the influence of the benzo ring in benzothiazole (272). Since this time, many studies have been devoted to the influence of various types of substitution upon fragmentation schemes and rearrangements, in the case of alkylthiazoles by Buttery (273) arylthiazoles by Aune et al. (276), Rix et al. (277), Khnulnitskii et al. (278) functional derivatives by Salmona el al. (279) and Entenmann (280) and thiazoles isotopically labeled with deuterium and C by Bojesen et al. (113). More recently, Witzhum et al. have detected the presence of simple derivatives of thiazole in food aromas by mass spectrometry (281). 

Present day techniques for structure determination in carbohydrate chemistry are sub stantially the same as those for any other type of compound The full range of modern instrumental methods including mass spectrometry and infrared and nuclear magnetic resonance spectroscopy is brought to bear on the problem If the unknown substance is crystalline X ray diffraction can provide precise structural information that m the best cases IS equivalent to taking a three dimensional photograph of the molecule... 

The various stages of this process depend critically on the type of gas, its pressure, and the configuration of the electrodes. (Their distance apart and their shapes control the size and shape of the applied electric field.) By controlling the various parameters, the discharge can be made to operate as a corona, a plasma, or an arc at atmospheric pressure. All three discharges can be used as ion sources in mass spectrometry. 

Another type of ion is formed almost uniquely by the electrospray inlet/ion source which makes this technique so valuable for examining substances such as proteins that have large relative molecular mass. Measurement of m/z ratios usually gives a direct measure of mass for most mass spectrometry because z = 1 and so m/z = m/1 = m. Values of z greater than one are unusual. However, for electrospray, values of z greater than one (often much greater), are quite coimnonplace. For example, instead of the [M + H]+ ions common in simple Cl, ions in electrospray can be [M + n-H]- where n can be anything from 1 to about 30. 

If a sample solution is introduced into the center of the plasma, the constituent molecules are bombarded by the energetic atoms, ions, electrons, and even photons from the plasma itself. Under these vigorous conditions, sample molecules are both ionized and fragmented repeatedly until only their constituent elemental atoms or ions survive. The ions are drawn off into a mass analyzer for measurement of abundances and mJz values. Plasma torches provide a powerful method for introducing and ionizing a wide range of sample types into a mass spectrometer (inductively coupled plasma mass spectrometry, ICP/MS). 

To examine a sample by inductively coupled plasma mass spectrometry (ICP/MS) or inductively coupled plasma atomic-emission spectroscopy (ICP/AES) the sample must be transported into the flame of a plasma torch. Once in the flame, sample molecules are literally ripped apart to form ions of their constituent elements. These fragmentation and ionization processes are described in Chapters 6 and 14. To introduce samples into the center of the (plasma) flame, they must be transported there as gases, as finely dispersed droplets of a solution, or as fine particulate matter. The various methods of sample introduction are described here in three parts — A, B, and C Chapters 15, 16, and 17 — to cover gases, solutions (liquids), and solids. Some types of sample inlets are multipurpose and can be used with gases and liquids or with liquids and solids, but others have been designed specifically for only one kind of analysis. However, the principles governing the operation of inlet systems fall into a small number of categories. This chapter discusses specifically substances that are normally liquids at ambient temperatures. This sort of inlet is the commonest in analytical work. 

An AutoSpec-TOF mass spectrometer has a magnetic sector and an electron multiplier ion detector for carrying out one type of mass spectrometry plus a TOF analyzer with a microchannel plate multipoint ion collector for another type of mass spectrometry. Either analyzer can be used separately, or the two can be run in tandem (Figure 20.4). 

When mass spectrometry was first used as a routine analytical tool, El was the only commercial ion source. As needs have increased, more ionization methods have appeared. Many different types of ionization source have been described, and several of these have been produced commercially. The present situation is such that there is now only a limited range of ion sources. For vacuum ion sources, El is still widely used, frequently in conjunction with Cl. For atmospheric pressure ion sources, the most frequently used are ES, APCI, MALDI (lasers), and plasma torches. 

All three types of discharge involve the formation of ions as part of the process. For various reasons, most of the ions are positive. The ions can be examined by mass spectrometry. If small amounts of a sample substance are introduced into a corona or plasma or arc, ions are formed by the electrons present in the discharge or by collision with ions of the discharge gas. 

The term liquid secondary ion mass spectrometry (LSIMS) is sometimes used synonymously with FAB and is preferred by some as being more descriptive, since FAB could apply to bombardment of solid or liquid surfaces and does not indicate the types of secondaries investigated. In practice, little confusion is likely to result from using either term. Strictly, LSIMS can refer to the use of fast ions (FIB). 

Specification tests are performed on plant streams once or twice per worker shift, or even more often if necessary, to assure the continuing quahty of the product. The tests are also performed on a sample from an outgoing shipment, and a sample of the shipment is usually retained for checking on possible subsequent contamination. Tests on specialty types of acetone may require sophisticated instmments, eg, mass spectrometry for isotopicaHy labeled acetone. 

The main advantages of the ms/ms systems are related to the sensitivity and selectivity they provide. Two mass analyzers in tandem significantly enhance selectivity. Thus samples in very complex matrices can be characterized quickly with Htde or no sample clean-up. Direct introduction of samples such as coca leaves or urine into an ms or even a gc/lc/ms system requires a clean-up step that is not needed in tandem mass spectrometry (28,29). Adding the sensitivity of the electron multiplier to this type of selectivity makes ms/ms a powerhil analytical tool, indeed. It should be noted that introduction of very complex materials increases the frequency of ion source cleaning compared to single-stage instmments where sample clean-up is done first. 

High resolution mass spectrometry (qv) has been used with extracts of a series of coals to indicate the association of different heteroatoms (27). Various types of chromatography (qv) have also been used to identify the smaller species that can be extracted from coal. 

Searching. A tmncation feature ( ) that allows word variation, eg, "mass spectrometry or mass spectroscopy" is used. Tide searching is accomphshed by using the added modifier "/ti" to bring up only tides. Commands to retrieve information generally use a protocol such as type-set number/format choice/number of records. 

Other technique—for example, dynamic secondary ion mass spectrometry or forward recoil spectrometry—that rely on mass differences can use the same type of substitution to provide contrast. However, for hydrocarbon materials these methods attain a depth resolution of approximately 13 nm and 80 nm, respectively. For many problems in complex fluids and in polymers this resolution is too poor to extract critical information. Consequently, neutron reflectivity substantially extends the depth resolution capabilities of these methods and has led, in recent years, to key information not accessible by the other techniques. 

Maximum benefit from Gas Chromatography and Mass Spectrometry will be obtained if the user is aware of the information contained in the book. That is, Part I should be read to gain a practical understanding of GC/MS technology. In Part II, the reader will discover the nature of the material contained in each chapter. GC conditions for separating specific compounds are found under the appropriate chapter headings. The compounds for each GC separation are listed in order of elution, but more important, conditions that are likely to separate similar compound types are shown. Part II also contains information on derivatization, as well as on mass spectral interpretation for derivatized and underivatized compounds. Part III, combined with information from a library search, provides a list of ion masses and neutral losses for interpreting unknown compounds. The appendices in Part IV contain a wealth of information of value to the practice of GC and MS. 

Every mass spectrometer consists of four principal components (Fig 1) (1) the source, where a beam of gaseous ions are produced from the sample (2) the analyzer, where the ion beam is resolved into its characteristic mass species (3) the detector, where the ions are detected and their intensities measured (4) the sample introduction system to vaporize and admit the sample into the ion source. There is a wide variety in each of these components and only those types which are relevant to analytical and organic mass spectrometry will be emphasized in this survey. The instrumentation... 

Macrolides, synthesis of 632 Mannich-type reactions 641 Mass spectrometry... 

Dialkyltetralins (DATs) and dialkylindanes are formed as byproducts during the alkylation process and these byproducts co-distill with LAB [9]. Examples of the unsulfonated and sulfonated dialkyltetralin are shown in Fig. 4. The level of DAT in LAB will vary depending on the type of alkylation process [10,11]. Table 3 lists the composition of several types of LABs and their DAT content as determined by gas chromatography-mass spectrometry (GCMS). It is important to note that a high level of DAT is not the result of alkylation with A1C13 catalyst. As seen in Table 3, AlCl3-catalyzed LAB can have a very low DAT content. 

In the single-chamber type reactor (Fig. 4.1b) all three electrodes (catalyst-working (W), counter (C) and reference (R)), electrode are all in the same chamber and are all exposed to the reactants and products.1 3 In this case the counter and reference electrodes must be made from a catalytically inert (e.g. Au) material for otherwise the catalytic rate on them will obscure the measured (via gas-chromatography or mass-spectrometry, Fig. 4.2) rate on the catalyst-working electrode. 

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