Iron-flavoproteins

The electron transferring non-heme iron proteins can be strictly differentiated from those non-heme iron proteins and polypeptides such as ferritin and ferrichrome which act in biological transfer and storage of iron. They can be distinguished also from iron-flavoproteins, such as succinic dehydrogenase, which contain flavin in addition to the iron constituent. Nevertheless, in many chemical and physical aspects, the non-heme iron moiety of the iron-flavoproteins exhibits behavior similar to that of electron-transferring non-heme iron proteins. 

Succinoxidase. Washed particles from heart muscle oxidize succinate to fumarate with oxygen as electron acceptor, This is the so-called succinoxidase preparation. The initial step in the oxidation of succinate has recently been found to be catalyzed by an iron-flavoprotein. When this is isolated from other components of succinoxidase, it fails to react with other enzymes and reduces efficiently only phenazines of the several oxidants that are effective with more complex preparations. Partially fragmented particles have been obtained by differential centrifugation of isobutanol-treated preparations of larger particles from mitochondria or by digestion with trypsin in the presence of cholate. These treatments yield preparations that can reduce cytochrome c. ... 

Ubiquinones are derivatives of / -benzoquinone, which is known to be a relatively poor acceptor of 2e -equivalents, be it hydride (even borohydride), carbanions, arsenite etc.. This relative lack of electro-philicity will be further decreased by the methoxyl substituents in ubiquinone. Biologically, the electron donor-acceptor activity of ubiquinones is strictly radical, since they serve as carriers between two iron systems, viz. the ferredoxin-like iron of the respiratory iron-flavoproteins as input site and cytochrome as output site. 

Lim, L.W., et al. Three-dimensional structure of the iron-sulfur flavoprotein trimethylamine dehydrogenase at 2.4 A resolution. J. Biol. Chem. 261 15140-15146, 1986. 

All these intermediates except for cytochrome c are membrane-associated (either in the mitochondrial inner membrane of eukaryotes or in the plasma membrane of prokaryotes). All three types of proteins involved in this chain— flavoproteins, cytochromes, and iron-sulfur proteins—possess electron-transferring prosthetic groups. 

Three protein complexes have been isolated, including the flavoprotein (FP), iron-sulfur protein (IP), and hydrophobic protein (HP). FP contains three peptides (of mass 51, 24, and 10 kD) and bound FMN and has 2 Fe-S centers (a 2Fe-2S center and a 4Fe-4S center). IP contains six peptides and at least 3 Fe-S centers. HP contains at least seven peptides and one Fe-S center. 

In mitochondria (Fig. lb), the electron acceptor protein is also a flavoprotein termed NADPH-adrenodoxin reductase (MW 50 kDa) because it was discovered in the adrenal cortex and because it donates its electrons not directly to the P450 but to the smaller redox protein adrenodoxin (MW 12.5 kDa). The two iron-sulphur clusters of this protein serve as electron shuttle between the flavoprotein and the mitochondrial P450. 

An iron sulfur-flavoprotein that transfers electrons directly to the dioxygenase, as in phthalate dioxygenase (class I)... 

The cytochromes are iron-containing hemoproteins in which the iron atom oscillates between Fe + and Fe + during oxidation and reduction. Except for cytochrome oxidase (previously described), they are classified as dehydrogenases. In the respiratory chain, they are involved as carriers of electrons from flavoproteins on the one hand to cytochrome oxidase on the other (Figure 12-4). Several identifiable cytochromes occur in the respiratory chain, ie, cytochromes b, Cp c, a, and (cytochrome oxidase). Cytochromes are also found in other locations, eg, the endoplasmic reticulum (cytochromes P450 and h, and in plant cells, bacteria, and yeasts. 

An additional component is the iron-sulfur protein (FeS nonheme iron) (Figure 12-6). It is associated with the flavoproteins (metallofiavoproteins) and with cytochrome b. The sulfur and iron are thought to take part in the oxidoreduction mechanism between flavin and Q, which involves only a single e change, the iron atom undergoing oxidoreduction between Fe " and Fe k... 

FeS Iron-sulfur protein ETF Electron-transferring flavoprotein Ep Elavoprotein Q Ubiquinone Cyt Cytochrome... 

H)2-D3 is a weak agonist and must be modified by hydroxylation at position Cj for full biologic activity. This is accomplished in mitochondria of the renal proximal convoluted tubule by a three-component monooxygenase reaction that requires NADPFl, Mg, molecular oxygen, and at least three enzymes (1) a flavoprotein, renal ferredoxin reductase (2) an iron sulfur protein, renal ferredoxin and (3) cytochrome P450. This system produces l,25(OH)2-D3, which is the most potent namrally occurring metabolite of vitamin D. 

This review will not be concerned with functionally alternative structures and metabolites which appear in iron-limited growth. Thus Clostridium pasteurianum and other bacteria when grown in the presence of iron form ferredoxin grown at low iron the same organisms form flavodoxin, a flavoprotein [Knight, ., Jr., Hardy, R. W. J. Biol. Chem. 242, 1370 (1967) Mayhem, S. G., Massey, V. J. Biol. Chem. 244, 794 (1969)]. 

In addition to these more-or-less well characterized proteins, iron is known to be bound to certain flavoproteins such as succinic dehydrogenase (20), aldehyde oxidase (27), xanthine oxidase (22) and dihydrooro-tate dehydrogenase (23). Iron is present and functional in non-heme segments of the electron transport chain but again no real structural information is at hand (24). 

There are two types of electron transport those involving flavoproteins and iron-sulfur proteins, and those requiring only flavoproteins. The X-ray crystal structure of the soluble cytochrome P450 from Pseudomonas putida grown on camphor (P-450-CAM) has been determined (Poulos et ah, 1985), as have several others. The haem group is deeply embedded in the hydrophobic interior of the protein, and the identity of the proximal haem iron ligand, based on earlier spectroscopic studies (Mason et ah, 1965) is confirmed as a specific cysteine residue. 

XOD is one of the most complex flavoproteins and is composed of two identical and catalytically independent subunits each subunit contains one molybdenium center, two iron sulfur centers, and flavine adenine dinucleotide. The enzyme activity is due to a complicated interaction of FAD, molybdenium, iron, and labile sulfur moieties at or near the active site [260], It can be used to detect xanthine and hypoxanthine by immobilizing xanthine oxidase on a glassy carbon paste electrode [261], The elements are based on the chronoamperometric monitoring of the current that occurs due to the oxidation of the hydrogen peroxide which liberates during the enzymatic reaction. The biosensor showed linear dependence in the concentration range between 5.0 X 10 7 and 4.0 X 10-5M for xanthine and 2.0 X 10 5 and 8.0 X 10 5M for hypoxanthine, respectively. The detection limit values were estimated as 1.0 X 10 7 M for xanthine and 5.3 X 10-6M for hypoxanthine, respectively. Li used DNA to embed xanthine oxidase and obtained the electrochemical response of FAD and molybdenum center of xanthine oxidase [262], Moreover, the enzyme keeps its native catalytic activity to hypoxanthine in the DNA film. So the biosensor for hypoxanthine can be based on... 

The reaction-center proteins for Photosystems I and II are labeled I and II, respectively. Key Z, the watersplitting enzyme which contains Mn P680 and Qu the primary donor and acceptor species in the reaction-center protein of Photosystem II Qi and Qt, probably plastoquinone molecules PQ, 6-8 plastoquinone molecules that mediate electron and proton transfer across the membrane from outside to inside Fe-S (an iron-sulfur protein), cytochrome f, and PC (plastocyanin), electron carrier proteins between Photosystems II and I P700 and Au the primary donor and acceptor species of the Photosystem I reaction-center protein At, Fe-S a and FeSB, membrane-bound secondary acceptors which are probably Fe-S centers Fd, soluble ferredoxin Fe-S protein and fp, is the flavoprotein that functions as the enzyme that carries out the reduction of NADP+ to NADPH. 

NADH-coenzyme Q (CoQ) oxidoreductase, transfers electrons stepwise from NADH, through a flavoprotein (containing FMN as cofactor) to a series of iron-sulfur clusters (which will be discussed in Chapter 13) and ultimately to CoQ, a lipid-soluble quinone, which transfers its electrons to Complex III. A If, for the couple NADH/CoQ is 0.36 V, corresponding to a AG° of —69.5 kJ/mol and in the process of electron transfer, protons are exported into the intermembrane space (between the mitochondrial inner and outer membranes). 

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