Haem iron

Figure 25.9 Some non-haem iron proteins (a) rubredoxin in which the single Fe is coordinated, almost tetra-hedrally, to 4 cysteine-sulfurs, (b) plant ferredoxin, [Fe2S2(S-Cys)4], (c) [Fe4S4(S-Cys)4] cube of bacterial ferredoxins. (This is in fact distorted, the Fe4 and S4 making up the two interpenetrating tetrahedra, of which the latter is larger than the former).

Thus the question arises as to what forms of haem proteins and transition metals are available in vivo that are capable of mediating the formation of damaging initiating or propagating species, since the majority of the iron and haem proteins in the human body are protected in vivo from exerting pro-oxidant activities by their compart-mentalization within their functional locations in the haem and non-haem iron-containing proteins and enzymes. 

Haemoglobin-derived haem iron has multiple pro-inflammatory effects resulting from its ability to initiate decomposition of lipid hydroperoxides from PUFAs. In... 

Blasiak, L.G., Vaillancourt, F.H., Walsh, C.T. and Drennan, C.L. (2006) Crystal structure of the non-haem iron halogenase SyrB2 in syringomycin biosynthesis. Nature, 440, 368-371. 

Vaillancourt, F.H., Yeh, E., Vosburg, D.A. et al. (2005) Cryptic chlorination by a non-haem iron enzyme during cyclopropyl amino acid biosynthesis. Nature, 436, 1191-1194. 

There are two types of electron transport those involving flavoproteins and iron-sulfur proteins, and those requiring only flavoproteins. The X-ray crystal structure of the soluble cytochrome P450 from Pseudomonas putida grown on camphor (P-450-CAM) has been determined (Poulos et ah, 1985), as have several others. The haem group is deeply embedded in the hydrophobic interior of the protein, and the identity of the proximal haem iron ligand, based on earlier spectroscopic studies (Mason et ah, 1965) is confirmed as a specific cysteine residue. 

Table 2.3 Mononuclear non-haem iron enzymes classified according both to enzyme type and reaction type. Reprinted with permission from Holm et al., 1996. Copyright (1996) American Chemical Society. 

Dioxygen reduction (oxidase activity) and activation for incorporation into organic substrates are catalysed by a number of mononuclear non-haem iron enzymes. We will first consider the intramolecular dioxygenases, in which both atoms of oxygen are introduced into the substrate, then the monoxygenases (in which we choose to include the pterin-dependent hydroxylases), the large family of a-hetoacid-dependent enzymes, and finally isopenicillin N-synthase. 

Among the mononuclear non-haem iron enzymes catalysing hydroxylation reactions (Table 2.3) we can distinguish between intramolecular dioxygenases and external mononoxygenases. The former can be divided into those which are pterin-dependent and those which use a-ketoacids such as a-keto glutarate as obligatory... 

The a-ketoacid-dependent enzymes are distinguished from other non-haem iron enzymes by their absolute requirement for an a-ketoacid cofactor as well as Fe(II) and O2 for activity. They catalyse two types of reaction (Table 2.3), hydroxyla-tion and oxidation. In both, the a-ketoglutarate is decarboxylated and one oxygen atom introduced into the succinate formed in the hydroxylases, the other oxygen atom is introduced into the substrate, while in the oxidases it is found in water, together with the cyclized product. In general these enzymes require one equivalent of Fe(II) an a-ketoacid, usually a-ketoglutarate and ascorbate. Examples of these enzymes include proline 4-hydroxylase, prolyl and lysyl hydroxylase, which... 

One last class of mononuclear non-haem iron enzyme that we have not yet considered, consists of the microbial superoxide dismutases with Fe(III) at their active site. The crystal structure of the E. coli enzyme shows a coordination geometry reminiscent of protocatechuate 3,4-dioxygenase, with four endogenous protein ligands, three His and one Asp residue, and one bound water molecule (Carlioz et ah, 1988). 

Rubrerythrin is the trivial name given to a family of non-haem iron proteins that have been isolated from a number of bacteria (Figure 6.2). The structure of the best characterized rubrerythrin, that from Desulfovibrio vulgaris, has been determined by... 

Inhibitors of non-haem iron absorption include polyphenols and phytates. The former, secondary plant metabolites rich in phenolic hydroxyl groups, are found... 

Current opinion is that both haem and non-haem iron arrive within the enterocyte as Fe2+, and it is concluded that this constitutes the labile cytosolic iron pool. While in the graphical representation at the end of this section, we will refer to this transit pool, its nature is not as well established as the other LIPs referred to in Chapter 6. 

The first of the haem uptake systems to be characterized at molecular level was that of Yersinia enterolitica, which closely resembles a typical siderophore uptake system (Stojiljkovic and Hantke, 1992, 1994), including a TonB-dependent outer membrane receptor for haem, a periplasmic binding protein, and a cytoplasmic membrane transport system. There also seems to be a protein that degrades haem and liberates haem iron within the cell. TonB-dependent outer membrane receptor proteins for haem have been cloned and sequenced from Shigella dysenteriae and E. coli (Mills and Payne, 1995 Torres and Payne, 1997), while in Vibrio cholera two genes are required for haem utilization, one an outer membrane receptor a second which may have a TonB-like function (Henderson and Payne, 1994). 

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