Enzymatic substrate determination

Such an effect can be useful in the case of enzymatic substrate determinations (cf. 2.6.1.3). When inhibitor activity is absent, i. e. [I] = 0, Equation 2.72 is transformed into the Michaelis-Menten equation (Equation 2.41). The Line-weaver-Burk plot (Fig. 2.30a) shows that the intercept 1 /V with the ordinate is the same in the presence and in the absence of the inhibitor, i. e. the value of V is not affected although the slopes of the lines differ. This shows that the inhibitor can be fully dislodged by the substrate from the active site of the enzyme when the substrate is present in high concentration. In other words, inhibition can be overcome at high substrate concentrations (see application in Fig. 2.49). The inhibitor constant, Ki, can be calculated from the corresponding intercepts with the abscissa in Fig. 2.30a by calculating the value of from the abscissa intercept when [I] = 0. 

The interplay of mass transfer, partition and enzymatic substrate conversion determines the dynamic measuring range, response time, and accessibility towards interferences of enzyme sensors. New principles for designing the analytical performance by coupled enzyme reactions are presented in this paper ... 

The authors of this review have used I-human serum albumin for determining proteolytic activity in various types of foodstuffs, enzymatic preparations (determination of the contaminating proteolytic activity), pharmaceuticals and other materials Proteolytic activity assays using radioactively labeled substrates... 

Biosensors have recently become an area of great Interest, especially in clinical chemistry. These sensors can be used to determine analyte concentrations in clinical samples, such as blood serum and urine. Electrochemical biosensors are constructed by incorporating a biochemical system, such as an enzyme, with an electrode. Amperometrlc biosensors often use oxidase enzymes, such as glucose oxidase, as the sensing enzyme. A major product of these types of enzymatic reactions is hydrogen peroxide, which can be oxidized at eun electrode surface. The current produced by the oxidation of hydrogen peroxide is directly proportional to the enzymatic substrate concentration. 

The kinetic method employed for substrate determination is the measurement of the rate of an enzymatically catalyzed reaction, as is used to determine enzyme activity. Rate methods are generally more rapid than the endpoint method. Complete conversion reactions, on the other hand, are less subject to interference from enzyme inhibitors or activators as long as sufficient time is allowed for completion conversion. 

Yagi, T. Hisada, R. Shibata, H. Substrates, metbods, and reagents for enzymatic activity determination. PCT Int. Appl. WO 9010084, 1990 Chem. Abstr. 1991,114, 202470. 

As shown in Section 9.1.2, the rate of an enzyme-catalyzed reaction is proportional to the concentration of substrate, if the latter is small compared with /fw. (The guideline [S] < 0.2 is often used.) This provides a simple approach to substrate determinations, which certainly represent the largest class of enzymatic analyses in modem practice, e.g., the measurement of blood glucose or blood cholesterol. In many instances, the analyses are highly selective, but not absolutely specific for the target sub.strate. 

Now, if we consider the response of an enzyme-based biosensor to the addition of the enzymatic substrate, this response is determined by the concentration of the product (P) of the enzymatic reaction on the surface of the electrode (Figure 8.1). This reaction is controlled by the rate of two simultaneous processes, that is, the enzymatic conversion of the substrate (S) and the diffusion of the product from the enzyme layer. 

Km for an enzymatic reaction are of significant interest in the study of cellular chemistry. From equation 13.19 we see that Vmax provides a means for determining the rate constant 2- For enzymes that follow the mechanism shown in reaction 13.15, 2 is equivalent to the enzyme s turnover number, kcat- The turnover number is the maximum number of substrate molecules converted to product by a single active site on the enzyme, per unit time. Thus, the turnover number provides a direct indication of the catalytic efficiency of an enzyme s active site. The Michaelis constant, Km, is significant because it provides an estimate of the substrate s intracellular concentration. 

Glucose [50-99-7] urea [57-13-6] (qv), and cholesterol [57-88-5] (see Steroids) are the substrates most frequentiy measured, although there are many more substrates or metaboUtes that are determined in clinical laboratories using enzymes. Co-enzymes such as adenosine triphosphate [56-65-5] (ATP) and nicotinamide adenine dinucleotide [53-84-9] in its oxidized (NAD" ) or reduced (NADH) [58-68-4] form can be considered substrates. Enzymatic analysis is covered in detail elsewhere (9). 

Enzymatic Catalysis. Enzymes are biological catalysts. They increase the rate of a chemical reaction without undergoing permanent change and without affecting the reaction equiUbrium. The thermodynamic approach to the study of a chemical reaction calculates the equiUbrium concentrations using the thermodynamic properties of the substrates and products. This approach gives no information about the rate at which the equiUbrium is reached. The kinetic approach is concerned with the reaction rates and the factors that determine these, eg, pH, temperature, and presence of a catalyst. Therefore, the kinetic approach is essentially an experimental investigation. 

The three most common types of inhibitors in enzymatic reactions are competitive, non-competitive, and uncompetitive. Competitive inliibition occurs when tlie substrate and inhibitor have similar molecules that compete for the identical site on the enzyme. Non-competitive inhibition results in enzymes containing at least two different types of sites. The inhibitor attaches to only one type of site and the substrate only to the other. Uncompetitive inhibition occurs when the inhibitor deactivates the enzyme substrate complex. The effect of an inhibitor is determined by measuring the enzyme velocity at various... 

Saturation kinetics are also called zero-order kinetics or Michaelis-Menten kinetics. The Michaelis-Menten equation is mainly used to characterize the interactions of enzymes and substrates, but it is also widely applied to characterize the elimination of chemical compounds from the body. The substrate concentration that produces half-maximal velocity of an enzymatic reaction, termed value or Michaelis constant, can be determined experimentally by graphing r/, as a function of substrate concentration, [S]. 

FIGURE 16.12 Enzymatically synthesized amylose"-type nb/lcb glucans ( ) with a significant amount of the substrate glucose-1-PO4 separated on Sephacryl S-SOO/S-IOOO (60 + 9S x 1.6 cm) 3-ml fractions were collected for further analysis normalized (area = 1.0) eluogram profiles (ev) constructed from an off-line determined mass of carbohydrates for each of the pooled fractions flow rate 0.42 ml/ min V,xd = 126 ml, V , = 273 ml eluent O.OOS M NaOH. 

Kinetics is the branch of science concerned with the rates of chemical reactions. The study of enzyme kinetics addresses the biological roles of enzymatic catalysts and how they accomplish their remarkable feats. In enzyme kinetics, we seek to determine the maximum reaction velocity that the enzyme can attain and its binding affinities for substrates and inhibitors. Coupled with studies on the structure and chemistry of the enzyme, analysis of the enzymatic rate under different reaction conditions yields insights regarding the enzyme s mechanism of catalytic action. Such information is essential to an overall understanding of metabolism. 

The availability of substrates and cofactors will determine the enzymatic reaction rate. In general, enzymes have evolved such that their values approximate the prevailing in vivo concentration of their substrates. (It is also true that the concentration of some enzymes in cells is within an order of magnitude or so of the concentrations of their substrates.)... 

The values determined from Figure 5.23 agree well with the values calculated from the equations (Table 5.5), with an error of 3.81% for the slope and 4.65% for the intersect, respectively. The obtained experimental data were consistent with the proposed enzymatic reaction and the reaction mechanisms with uncompetitive substrate inhibition and the noncompetitive product inhibition model. 

Similarly to quantitative determination of high surfactant concentrations, many alternative methods have been proposed for the quantitative determination of low surfactant concentrations. Tsuji et al. [270] developed a potentio-metric method for the microdetermination of anionic surfactants that was applied to the analysis of 5-100 ppm of sodium dodecyl sulfate and 1-10 ppm of sodium dodecyl ether (2.9 EO) sulfate. This method is based on the inhibitory effect of anionic surfactants on the enzyme system cholinesterase-butyryl-thiocholine iodide. A constant current is applied across two platinum plate electrodes immersed in a solution containing butyrylthiocholine and surfactant. Since cholinesterase produces enzymatic hydrolysis of the substrate, the decrease in the initial velocity of the hydrolysis caused by the surfactant corresponds to its concentration. Amounts up to 60 pg of alcohol sulfate can be spectrometrically determined with acridine orange by extraction of the ion pair with a mixture 3 1 (v/v) of benzene/methyl isobutyl ketone [271]. 

The enantioselectivity of biocatalytic reactions is normally expressed as the enantiomeric ratio or the E value [la], a biochemical constant intrinsic to each enzyme that, contrary to enantiomeric excess, is independent of the extent of conversion. In an enzymatic resolution of a racemic substrate, the E value can be considered equal to the ratio of the rates of reaction for the two enantiomers, when the conversion is close to zero. More precisely, the value is defined as the ratio between the specificity constants (k st/Ku) for tho two enantiomers and can be obtained by determination of the k<-at and Km of a given enzyme for the two individual enantiomers. 

However, considering practical limitations, that is, the availability of optically pure enantiomers, E values are more commonly determined on racemates by evaluating the enantiomeric excess values as a function of the extent of conversion in batch reactions. For irreversible reactions, the E value can be calculated from Equation 1 (when the enantiomeric excess ofthe product is known) or from Equation 2 (when the enantiomeric excess ofthe substrate is knovm) [la]. For reversible reactions, which may be the case in enzymatic resolution carried out in organic solvents (especially at extents of conversion higher than 40%), Equations 3 or 4, in which the reaction equilibrium constant has been introduced, should be used [lb]. 

Conformationally restricted analogs of substrates can be useful in elucidating both the substrate specificities and the product specificities of enzymes. The restriction can help stabilize an intermediate in the enzymatic process so that it may be isolated. Two or more otherwise structurally equivalent portions of a substrate may be rendered nonequivalent by the restriction so that potential differentiation of these portions by the enzyme in determining product specificity may be investigated. 

The antibody solution (1.6x10 M) and substrate solutions with various concentration from 10 M to 10 M were mixed on a BSA-coated plate. The mixed solution of antibodies and substrates was allowed to stand for 1 day at room temperature, and then transported to the ELISA plates pre-coated with BSA-hapten and BSA blocking buffer. Absorbance at 405 nm for the resulting enzymatic hydrolysis product (p-nitrophenolate) by alkalinephosphatase of the second antibody was recorded on an Immuno-Mini NJ-2300 to determine the amount of antibody bound to BSA-hapten. 

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