Unimolecular reactions transition-state theory

Both unimolecular and bimolecular reactions are common throughout chemistry and biochemistry. Binding of a hormone to a reactor is a bimolecular process as is a substrate binding to an enzyme. Radioactive decay is often used as an example of a unimolecular reaction. However, this is a nuclear reaction rather than a chemical reaction. Examples of chemical unimolecular reactions would include isomerizations, decompositions, and dis-associations. See also Chemical Kinetics Elementary Reaction Unimolecular Bimolecular Transition-State Theory Elementary Reaction... 

ELECTROSTATIO BOND ELECTROSTATIO SUREAOE POTENTIAL ELECTROSTRIOTION ELECTROTAXIS ELECTROVALENT BOND ELEMENTARY OHARGE ELEMENTARY REACTION Elementary reaction stoichiometry, MOLECULARITY CHEMICAL KINETICS UNIMOLECULAR BIMOLECULAR TRANSITION-STATE THEORY ELEMENTARY REACTION Element effect,... 

STOICHIOMETRIC NUMBER Stoichiometry of elementary reactions, CHEMICAL KINETICS MOLECULARITY UNIMOLECULAR BIMOLECULAR TRANSITION-STATE THEORY ELEMENTARY REACTION STOKE S SHIFT... 

Steps (5) and (6) are discussed in Rates of Chemical Reactions Transition State Theory and Unimolecular Reaction Dynamics. Here, the focus will be on the first four steps of the procedure outlined above. 

Fast transient studies are largely focused on elementary kinetic processes in atoms and molecules, i.e., on unimolecular and bimolecular reactions with first and second order kinetics, respectively (although confonnational heterogeneity in macromolecules may lead to the observation of more complicated unimolecular kinetics). Examples of fast thennally activated unimolecular processes include dissociation reactions in molecules as simple as diatomics, and isomerization and tautomerization reactions in polyatomic molecules. A very rough estimate of the minimum time scale required for an elementary unimolecular reaction may be obtained from the Arrhenius expression for the reaction rate constant, k = A. The quantity /cg T//i from transition state theory provides... 

It is worthwhile to first review several elementary concepts of reaction rates and transition state theory, since deviations from such classical behavior often signal tunneling in reactions. For a simple unimolecular reaction. A—>B, the rate of decrease of reactant concentration (equal to rate of product formation) can be described by the first-order rate equation (Eq. 10.1). 

According to the transition state theory, the rate constant of unimolecular reaction (at high pressure in the gas phase) is the following [5] ... 

As is implied by the name, a unimolecular reaction is one in which a single molecule of reactant decomposes or rearranges to give rise to product molecules. Ordinary thermal reactions can be modeled by a process which considers the reactant to be in thermal equilibrium with a transition state which then decomposes (rearranges) to give products. One can theoretically describe the process and its isotope effects using transition state theory. For unimolecular reactions, on the other hand, while there is still a transition state, it is not in thermal equilibrium with the reactant except for systems at high pressure. Consequently, a more elaborate theoretical framework is required to understand unimolecular reactions and their isotope effects. 

For a temperature of 1000 K, calculate the pre-exponential factor in the specific reaction rate constant for (a) any simple bimolecular reaction and (b) any simple unimolecular decomposition reaction following transition state theory. 

Let us consider in more detail the concept of a free energy barrier. Transition state theory also uses the idea that there is such a barrier in the reaction path. What is special about TST is that it ascribes certain properties to the species at the top of the barrier, the activated complex. According to TST for a unimolecular reaction,... 

The thermodynamic formulation of the transition state theory (TST), as applied to a unimolecular reaction described symbolically by... 

At high temperatures and low pressures, the unimolecular reactions of interest may not be at their high-pressure limits, and observed rates may become influenced by rates of energy transfer. Under these conditions, the rate constant for unimolecular decomposition becomes pressure- (density)-dependent, and the canonical transition state theory would no longer be applicable. We shall discuss energy transfer limitations in detail later. 

Consider the simple unimolecular reaction of Eq. (15.3), where the objective is to compute the forward rate constant. Transition-state theory supposes that the nature of the activated complex. A, is such that it represents a population of molecules in equilibrium with one another, and also in equilibrium with the reactant, A. That population partitions between an irreversible forward reaction to produce B, with an associated rate constant k, and deactivation back to A, with a (reverse) rate constant of kdeact- The rate at which molecules of A are activated to A is kact- This situation is illustrated schematically in Figure 15.1. Using the usual first-order kinetic equations for the rate at which B is produced, we see that... 

Figure 15.1 The nature of a unimolecular reaction within the framework of transition-state theory...

Elementary reactions are initiated by molecular collisions in the gas phase. Many aspects of these collisions determine the magnitude of the rate constant, including the energy distributions of the collision partners, bond strengths, and internal barriers to reaction. Section 10.1 discusses the distribution of energies in collisions, and derives the molecular collision frequency. Both factors lead to a simple collision-theory expression for the reaction rate constant k, which is derived in Section 10.2. Transition-state theory is derived in Section 10.3. The Lindemann theory of the pressure-dependence observed in unimolecular reactions was introduced in Chapter 9. Section 10.4 extends the treatment of unimolecular reactions to more modem theories that accurately characterize their pressure and temperature dependencies. Analogous pressure effects are seen in a class of bimolecular reactions called chemical activation reactions, which are discussed in Section 10.5. 

Transition-state theory is based on the assumption of chemical equilibrium between the reactants and an activated complex, which will only be true in the limit of high pressure. At high pressure there are many collisions available to equilibrate the populations of reactants and the reactive intermediate species, namely, the activated complex. When this assumption is true, CTST uses rigorous statistical thermodynamic expressions derived in Chapter 8 to calculate the rate expression. This theory thus has the correct limiting high-pressure behavior. However, it cannot account for the complex pressure dependence of unimolecular and bimolecular (chemical activation) reactions discussed in Sections 10.4 and 10.5. 

Thus transition-state theory provides a relatively straightforward way of estimating Aoo if it is unavailable from experiment. The next section treats the theory of unimolecular reactions, and in particular, their pressure dependence, much more rigorously. 

R. A. Marcus It certainly is a good point that transition state theory, and hence RRKM, provides an upper bound to the reactive flux (apart from nuclear tunneling) as Wigner has noted. Steve Klippenstein [1] in recent papers has explored the question of the best reaction coordinate, e.g., in the case of a unimolecular reaction ABC — AB + C, where A, B, C can be any combination of atoms and groups, whether the BC distance is the best choice for defining the transition state, or the distance between C and the center of mass of AB, or some other combination. The best combination is the one which yields the minimum flux. In recent articles Steve Klippenstein has provided a method of determining the best (in coordinate space) transition state [1]. 

Transition state theory thus allows the writing of a rate equation for any elementary reaction, and a transformation in which an intermediate is postulated can be treated as a sequence of elementary steps. For any particular sequence, a set of differential equations may be written. For the simplest of these, the sequence of two irreversible unimolecular reactions shown in Fig. 9.2, the exact integrated forms are available permitting calculation and plotting of the time course of anticipated concentration changes for a comparison with experimental data see Chapters 3 and 4. 

RRKM theory, an approach to the calculation of the rate constant of indirect reactions that, essentially, is equivalent to transition-state theory. The reaction coordinate is identified as being the coordinate associated with the decay of an activated complex. It is a statistical theory based on the assumption that every state, within a narrow energy range of the activated complex, is populated with the same probability prior to the unimolecular reaction. The microcanonical rate constant k(E) is given by an expression that contains the ratio of the sum of states for the activated complex (with the reaction coordinate omitted) and the total density of states of the reactant. The canonical k(T) unimolecular rate constant is given by an expression that is similar to the transition-state theory expression of bimolecular reactions. 

The RRKM (after Rice, Ramsperger, Kassel, and Marcus) theory is, basically, transition-state theory (see, in particular, the description in Section 6.2) applied to a unimolecular reaction. Thus, one focuses on the activated complex... 

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