Stereochemistry Stereoisomers

The Pd-catalyzed hydrogenolysis of vinyloxiranes with formate affords homoallyl alcohols, rather than allylic alcohols regioselectively. The reaction is stereospecific and proceeds by inversion of the stereochemistry of the C—O bond[394,395]. The stereochemistry of the products is controlled by the geometry of the alkene group in vinyloxiranes. The stereoselective formation of stereoisomers of the syn hydroxy group in 630 and the ami in 632 from the ( )-epoxide 629 and the (Z)-epoxide 631 respectively is an example. 

Allylic amines can be cleaved. Hydrogenolysis of allylic amines of different stereochemistry with NaBH CN was applied to the preparation of both dia-stereoisomers 655 and 657 of cyclopentenylglycine from the cyclic amines 654 and 656 of different stereochemistry[405]. 

In this case the relationship between stability and stereochemistry is easily explained on the basis of van der Waals strain The methyl groups on the same side of the ring m cis 1 2 dimethylcyclopropane crowd each other and increase the potential energy of this stereoisomer Steric hindrance between methyl groups is absent m trans 1 2 dimethylcyclopropane... 

Stereochemistry refers to chemistry in three dimensions Its foundations were laid by Jacobus van t Hoff and Joseph Achille Le Bel m 1874 Van t Hoff and Le Bel mde pendently proposed that the four bonds to carbon were directed toward the corners of a tetrahedron One consequence of a tetrahedral arrangement of bonds to carbon is that two compounds may be different because the arrangement of their atoms m space IS different Isomers that have the same constitution but differ m the spatial arrangement of their atoms are called stereoisomers We have already had considerable experience with certain types of stereoisomers—those involving cis and trans substitution patterns m alkenes and m cycloalkanes... 

Just as It makes sense to have a nomenclature system by which we can specify the con stitution of a molecule m words rather than pictures so too is it helpful to have one that lets us describe stereochemistry We have already had some experience with this idea when we distinguished between E and Z stereoisomers of alkenes... 

The preparation of cis 4 tert butylcyclohexanol from its trans stereoisomer was earned out by the following sequence of steps Write structural formulas including stereochemistry for com pounds A and B... 

Before leaving this biosynthetic scheme notice that PGE2 has four chirality cen ters Even though arachidomc acid is achiral only the stereoisomer shown m the equa tion IS formed Moreover it is formed as a single enantiomer The stereochemistry is controlled by the interaction of the substrate with the enzymes that act on it Enzymes offer a chiral environment m which biochemical transformations occur and enzyme catalyzed reactions almost always lead to a single stereoisomer Many more examples will be seen m this chapter... 

Stereochemistry (Chapter 7) Chemistry in three dimensions the relationship of physical and chemical properties to the spatial arrangement of the atoms in a molecule Stereoelectron ic effect (Section 5 16) An electronic effect that depends on the spatial arrangement between the or bitals of the electron donor and acceptor Stereoisomers (Section 3 11) Isomers with the same constitu tion but that differ in respect to the arrangement of their atoms in space Stereoisomers may be either enantiomers or diastereomers... 

Concepts in stereochemistry, that is, chemistry in three-dimensional space, are in the process of rapid expansion. This section will deal with only the main principles. The compounds discussed will be those that have identical molecular formulas but differ in the arrangement of their atoms in space. Stereoisomers is the name applied to these compounds. 

The poly(vinyl alcohol) made for commercial acetalization processes is atactic and a mixture of cis- and /n j -l,3-dioxane stereoisomers is formed during acetalization. The precise cis/trans ratio depends strongly on process kinetics (16,17) and small quantities of other system components (23). During formylation of poly(vinyl alcohol), for example, i j -acetalization is more rapid than /ra/ j -acetalization (24). In addition, the rate of hydrolysis of the trans-2iQ. -A is faster than for the <7 -acetal (25). Because hydrolysis competes with acetalization during acetal synthesis, a high cis/trans ratio is favored. The stereochemistry of PVF and PVB resins has been studied by proton and carbon nmr spectroscopy (26—29). 

Many classes of natural product possess heterocyclic components (e.g. alkaloids, carbohydrates). However, their structures are often complex, and although structure-based names derived by using the principles outlined in the foregoing sections can be devised, such names tend to be impossibly cumbersome. Furthermore, the properties of complex natural product structures are often closely bound up with their stereochemistry, and for a molecule containing a number of asymmetric elements the specification of a particular stereoisomer by using the fundamental descriptors (R/S, EjZ) is a job few chemists relish. 

Since the stereochemistry of the triene system of LTB4 had not been determined prior to synthesis, a number of stereoisomers of LTB4 were prepared for purposes of definitive comparison of physical properties and bioactivity with biologically produced LTB4. The various stereoisomers of LTB4 were much less active biologically than LTB4 itself. 

The product of nucleophilic attack can be anticipated by examining the lowest-unoccupied molecular orbital (LUMO) on protonated cyclopentene oxide. From which direction (top or bottom) would a nucleophile be more likely to approach each epoxide carbon in order to transfer electrons into this orbital Explain. Does one carbon contribute more to the LUMO, or is the orbital evenly spread out over both epoxide carbons Assuming that LUMO shape dictates product stereochemistry, predict which stereoisomers will be obtained, and their approximate relative amounts. Is the anticipated kinetic product also the thermodynamic product (Compare energies of 1,2-cyclopentanediol stereoisomers to tell.)... 

The Diels-Alder reactions of the methyl or ethyl ester of benzenesulfonylindole-2-acrylic acid with several l-alkoxycarbonyl-l,2-dihydropyridines are reported and only a single stereoisomer was obtained, as in the case of l-methoxy(ethoxy)-carbonyl-1,2-dihydropyridines. However, when the Diels-Alder reaction of 17 was carried out with 8g[R = (CHsjsC], a mixture of two stereoisomers 18gand25were obtained in a 1 1 ratio (65% total yield). The bulky rerr-butyl group creates sufficient steric interference with the indole ring to cause the loss of stereochemistry ... 

A conveniently short synthesis of a1prostadi1 begins with a mixed aldol assembly of the requisite cyclopentenone 13. This product is then oxidatively cleaved with periodate-permanganate and the alcohol moiety is protected as the tetra-hydropyranyl ether (14). Aqueous chromous sulfate satisfactorily reduces the olefinic linkage and the trans stereoisomer 15 predominates after work-up. The remainder of the synthesis of involves the usual steps, through 16 to with the exception that thexyl tetrahydrolimonyllithium borohydride is used to reduce the C-15 keto moiety so as to produce preferentially the desired C-15S stereochemistry. 

Pieces of various routes to moxalactam have been published from which the following may be assembled as one of the plausible pathways. The benzhydrol ester of 6-aminopenici 11 anic acid ( ) is -chlorinated and treated with base whereupon the intermediate sulfenyl chloride fragments to ). Next, displacement with propargyl alcohol in the presence of zinc chloride gives predominantly the stereochemistry represented by dia-stereoisomer The side chain is protected as the phenyl-... 

The stereoisomers of olefin saturation are often those derived by cis addition of hydrogen to the least hindered side of the molecule (99). But there are many exceptions and complications (97), among which is the difficulty of determining which side of the molecule is the least hindered. Double-bond isomerization frequently occurs, and the hydrogenation product is the resultant of a number of competing reactions. Experimentally, stereochemistry has been found to vary, sometimes to a marked degree, with olefin purity, reaction parameters, solvent, and catalyst 30,100). Generalizing, it is expedient, when unwanted products arise as a result of prior isomerization, to avoid those catalysts and conditions that are known to favor isomerization. 

Although this mechanism seems plausible, it s not fully consistent with known facts. In particular, it doesn t explain the stereochemistry of the addition reaction. That is, the mechanism doesn t tell which product stereoisomer is formed. 

When the halogenation reaction is carried out on a cycloalkene, such as cyclopentene, only the trews stereoisomer of the dihalide addition product is formed rather than the mixture of cis and trans isomers that might have been expected if a planar carbocation intermediate were involved. We say that the reaction occurs with anti stereochemistry, meaning that the two bromine atoms come from opposite faces of the double bond—one from the top face and one from the bottom face. 

One of the most useful features of the Diels-Alder reaction is that it isstaeo-specific, meaning that a single product stereoisomer is formed. Furthermore, the stereochemistry of the reactant is maintained. If we carry out the cycloaddition with a cis dienophile, such as methyl ds-2-butenoate, only the cis-substituted cyclohexene product is formed. With methyl tmtts-2-butenoate, only thetrans-substituted cyclohexene product is formed. 

Fischer s original method for conversion of the nitrile into an aldehyde involved hydrolysis to a carboxylic acid, ring closure to a cyclic ester (lactone), and subsequent reduction. A modern improvement is to reduce the nitrile over a palladium catalyst, yielding an imine intermediate that is hydrolyzed to an aldehyde. Note that the cyanohydrin is formed as a mixture of stereoisomers at the new chirality center, so two new aldoses, differing only in their stereochemistry at C2, Tesult from Kiliani-Fischer synthesis. Chain extension of D-arabinose, for example, yields a mixture of D-glucose and o-mannose. 

Cis-trans isomers (Sections 4.2, 6.4) Stereoisomers that differ in their stereochemistry about a double bond or ring. 

The issue of stereochemistry, on the other hand, is more ambiguous. A priori, an aldol condensation between compounds 3 and 4 could proceed with little or no selectivity for a particular aldol dia-stereoisomer. For the desired C-7 epimer (compound 2) to be produced preferentially, the crucial aldol condensation between compounds 3 and 4 would have to exhibit Cram-Felkin-Anh selectivity22 23 (see 3 + 4 - 2, Scheme 9). In light of observations made during the course of Kishi s lasalocid A synthesis,12 there was good reason to believe that the preferred stereochemical course for the projected aldol reaction between intermediates 3 and 4 would be consistent with a Cram-Felkin-Anh model. Thus, on the basis of the lasalocid A precedent, it was anticipated that compound 2 would emerge as the major product from an aldol coupling of intermediates 3 and 4. 

Vinyl radicals can also participate in 6-exo cyclizations. In pioneering work, Stork and his group at Columbia University showed that stereoisomeric vinyl bromides 20 and 21 (see Scheme 3) can be converted to cyclohexene 22.7 The significance of this finding is twofold first, the stereochemistry of the vinyl bromide is inconsequential since both stereoisomers converge upon the same product and second, the radical cyclization process tolerates electrophilic methoxycarbonyl groups. The observation that the stereochemistry of the vinyl bromide is inconsequential is not surprising because the barrier for inversion of most vinyl radicals is very low.8 This important feature of vinyl radical cyclization chemistry is also exemplified in the conversion of vinyl bromide 23 to tricycle 24, the key step in Stork s synthesis of norseychellanone (25) (see Scheme 4).9 As in... 

It is worth pointing out that the stereochemistry of intermediate 147 at C-9 and C-10 is inconsequential since both positions will eventually bear trigonal carbonyl groups in the final product. The synthetic problem is thus significantly simplified by virtue of the fact that any or all C9-C10 diol stereoisomers could be utilized. A particularly attractive means for the construction of the C9-C10 bond and the requisite C8-C10 functionality in 147 is revealed by the disconnection shown in Scheme 41. It was anticipated that the venerable intermolecular aldol reaction could be relied upon to accomplish the union of aldehyde 150 and methyl glycolate (151) through a bond between carbons 9 and 10. 

In recent years, a great variety of primary chiral amines have been obtained in enantiomerically pure form through this methodology. A representative example is the KR of some 2-phenylcycloalkanamines that has been performed by means of aminolysis reactions catalyzed by lipases (Scheme 7.17) [34]. Kazlauskas rule has been followed in all cases. The size of the cycle and the stereochemistry of the chiral centers of the amines had a strong influence on both the enantiomeric ratio and the reaction rate of these aminolysis processes. CALB showed excellent enantioselec-tivities toward frans-2-phenylcyclohexanamine in a variety of reaction conditions ( >150), but the reaction was markedly slower and occurred with very poor enantioselectivity with the cis-isomer, whereas Candida antarctica lipase A (GALA) was the best catalyst for the acylation of cis-2-phenylcyclohexanamine ( = 34) and frans-2-phenylcyclopropanamine ( =7). Resolution of both cis- and frans-2-phenyl-cyclopentanamine was efficiently catalyzed by CALB obtaining all stereoisomers with high enantiomeric excess. 

The lUPAC 1974 Recommendations, Section E, Fundamental Stereochemistry, give definitions for most of the terms used in this chapter, as well as rules for naming the various kinds of stereoisomers. They can be found in Pure Appl. Chem., 1976, 45,... 

The unsaturated oximes 224 (see Table 21) were readily prepared by AT-alkyl-ation of allyl amines with a-bromoketones or O-silyl-a-bromoaldoximes. Heating the oximes 224 in toluene under an argon atm at 110 -180 °C smoothly led to isoxazolidines 225 in good yields with cis ring junction stereochemistry. Even when three stereocenters were generated, as in 225 g-1, a single stereoisomer... 

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