Serine protease elastase

A different strategy for measuring protease activity is based on the property of xanthene dyes to form H-type dimers (see Sect. 6.2.3) when they are in close proximity. These dimers are accompanied with a characteristic quenching of their fluorescence and, particularly for rhodamines, with a blue shift in the absorption spectrum [121, 122]. The probe D-NorFES-D designed to measure activity of elastase in HL-60 cells consists of an undecapeptide derivatized with one tetramethylrhodamine dye on each side. The sequence contains proline residues to create a bent structure and bring the two fluoro-phores in close proximity. Intact D-NorFES-D shows 90% of its fluorescence quenched plus a blue shift of the absorption spectrum. After addition of the serine protease elastase, an increase in the fluorescence and a bathochromic shift of the absorption spectrum is observed, resulting in an increase in the emission ratio [80],... 

Bahgat, M. and Ruppel, A. (2002) Biochemical comparison of the serine protease (elastase) activities in cercar-ial secretions from Trichobilharzia ocellata and Schistosoma mansoni. Parasitology Research 88, 495-500. 

J.A. Katzenellenbogen et al. developed an efficient method for the synthesis of alkyl-substituted enol lactones that are potent inhibitors of the serine protease elastase. The precursors for the enol lactones were a- and 3-alkyl-substituted 5-hexynoic acids, which were prepared by the bromoform reaction of the corresponding alkynoic methyl... 

Dai, W., Katzenellenbogen, J. A. New approaches to the synthesis of alkyl-substituted enol lactone systems, inhibitors of the serine protease elastase. J. Org. Chem. 1993, 58, 1900-1908. 

Another serine protease, elastase, when denatured and reduced, is able to refold spontaneously after removal of denaturant and reducing reagent with a yield of 65% under optimal conditions. This has been shown by using several probes of the native conformation. The recovery of the overall con-... 

The serine proteases are the most extensively studied class of enzymes. These enzymes are characterized by the presence of a unique serine amino acid. Two major evolutionary families are presented in this class. The bacterial protease subtilisin and the trypsin family, which includes the enzymes trypsin, chymotrypsin, elastase as well as thrombin, plasmin, and others involved in a diverse range of cellular functions including digestion, blood clotting, hormone production, and complement activation. The trypsin family catalyzes the reaction ... 

OCi-Antitrypsin is the major serine protease inhibitor of plasma, in particular inhibiting the elastase of neu-... 

Serine proteases usually show primary specificity (occupation of subsite Si) for positively charged arginine or lysine (trypsin, plasmin, plasminogen activators, thrombin), large hydrophobic side chains of phenylalanine, tyrosine, and tryptophan (chymotrypsin, cathepsin G, chymase, and subtilisin), or small aliphatic side chains (elastases). Nevertheless, there are a large number of variations and in many cases, other subsites like S2 and S3 are more discriminating while maintaining the... 

Finally, coumarin derivatives may act as general inhibitors of serine proteases or as specific inhibitors of human leukocyte elastase, depending on the nature of the substituents, through two distinct mechanisms, suicide substrates (a-chymotrypsin)... 

Serine proteases, see Trypsin, Chymotrypsin, Elastase, Strepto-myces griseus proteases A and B, or Subtilisin Southern bean mosaic virus protein (Abad-Zapatero et al., 1980) Jellyroll Greek key (3 barrel (Fig. 81)... 

Thus, the use of subzero temperatures in cryosolvents has allowed a series of intermediates in the elastase reaction to be identified, characterized, and stabilized. Temporal resolution of the significant steps in this reaction was difficult to achieve by any other method. Analogous results with other serine proteases suggest that these results are general for this class of enzymes. 

The presence of a covalent acyl-enzyme intermediate in the catalytic reaction of the serine proteases made this class of enzymes an attractive candidate for the initial attempt at using subzero temperatures to study an enzymatic mechanism. Elastase was chosen because it is easy to crystallize, diffracts to high resolution, has an active site which is accessible to small molecules diffusing through the crystal lattice, and is stable in high concentrations of cryoprotective solvents. The strategy used in the elastase experiment was to first determine in solution the exact conditions of temperature, organic solvent, and proton activity needed to stabilize an acyl-enzyme intermediate for sufficient time for X-ray data collection, and then to prepare the complex in the preformed, cooled crystal. Solution studies were carried out in the laboratory of Professor A. L. Fink, and were summarized in Section II,A,3. Briefly, it was shown that the chromophoric substrate -carbobenzoxy-L-alanyl-/>-nitrophenyl ester would react with elastase in both solution and in crystals in 70 30 methanol-water at pH 5.2 to form a productive covalent complex. These... 

A large group of proteinases contain serine in their active center. The serine proteases include, for example, the digestive enzymes trypsin, chymotrypsin, and elastase (see pp. 94 and 268), many coagulation factors (see p. 290), and the fibrinolytic enzyme plos-min and its activators (see p. 292). 

The digestive enzymes trypsin, chymotrypsin, elastase, and proteinase E are related serine proteases. All three are synthesized in the pancreas which secretes 5-10 g per day of proteins, mostly the inactive proenzymes (zymogens) of digestive enzymes.191,192... 

From study of peptides formed by partial hydrolysis of the 32P-labeled chymotrypsin, the sequence of amino acids surrounding the reactive serine was established and serine 195 was identified as the residue whose side chain hydroxyl group became phosphorylated. The same sequence Gly-Asp-Ser-Gly was soon discovered around reactive serine residues in trypsin, thrombin, elastase, and in the trypsin-like cocoonase used by silkmoths to escape from their cocoons.198 We know now that these are only a few of the enzymes in a very large family of serine proteases, most of which have related active site sequences.199 200 Among these are thrombin and other enzymes of the blood-clotting cascade (Fig. 12-17), proteases of lysosomes, and secreted proteases. 

Isocoumarins inactivate many serine proteases. For example, 7-amino-4-chloro-3-methoxyisocoumarin acylates serine 195 of elastases as follows.s... 

The mammalian serine proteases have a common tertiary structure as well as a common function. The enzymes are so called because they have a uniquely reactive serine residue that reacts irreversibly with organophosphates such as diisopropyl fluorophosphate. The major pancreatic enzymes—trypsin, chymotrypsin, and elastase—are kinetically very similar, catalyzing the hydrolysis of peptides... 

The mammalian serine proteases appear to represent a classic case of divergent evolution. All were presumably derived from a common ancestral serine protease.23 Proteins derived from a common ancestor are said to be homologous. Some nonmammalian serine proteases are 20 to 50% identical in sequence with their mammalian counterparts. The crystal structure of the elastase-like protease from Streptomyces griseus has two-thirds of the residues in a conformation similar to those in the mammalian enzymes, despite having only 186 amino acids in its sequence, compared with 245 in a-chymotrypsin. The bacterial enzymes and the pancreatic ones have probably evolved from a common precursor. 

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