Substrates suicide

Herbicidal Inhibition of Enzymes. The Hst of known en2yme inhibitors contains five principal categories group-specific reagents substrate or ground-state analogues, ie, rapidly reversible inhibitors affinity and photo-affinity labels suicide substrate, or inhibitors and transition-state, or reaction-intermediate, analogues, ie, slowly reversible inhibitors (106). 

Suicide substrate and reaction intermediate inhibitors promise the highest degree of specificity and have drawn increased attention (106). 

The efficiency of inactivation by covalent bond formation vs release of the reactive species into solution has been described by its partition ratio. The most efficient inactivators have catalytic partition ratios of 0, in which case each inhibitor molecule leads to inactivation of the enzyme. To this date, many of these inhibitors have been designed, and alternative names like suicide substrate, Trojan Horse inactivator, enzyme induced inactivator, inhibitor, and latent inactivator have been used for this class of inhibitors. A number of comprehensive reviews are available (26—32). 

Suicide Substrates —Mechanism-Based Enzyme Inactivators... 

Inactivators of class A (3-lactamases (clavulanate, sulbactam, tazobactam) are themselves (3-lactams and act as suicide substrates. They can be used in... 

The class B metallo- 3-lactamases have emerged more recently as a clinical problem but they are particularly dangerous since many of them hydrolyse all know (3-lactams, with the exception of monobac-tams. In particular, they hydrolyse the suicide substrates mentioned above, as well as carbapenems that usually escape the activity of all the SXXK enzymes, with the exception of the NMCA group. 

The primary site of action of OPs is AChE, with which they interact as suicide substrates (see also Section 10.2.2 and Chapter 2, Figure 2.9). Similar to other B-type esterases, AChE has a reactive serine residue located at its active site, and the serine hydroxyl is phosphorylated by organophosphates. Phosphorylation causes loss of AChE activity and, at best, the phosphorylated enzyme reactivates only slowly. The rate of reactivation of the phosphorylated enzyme depends on the nature of the X groups, being relatively rapid with methoxy groups (tso 1-2 h), but slower with larger... 

The starting point for much of the work described in this article is the idea that quinone methides (QMs) are the electrophilic species that are generated from ortho-hydro-xybenzyl halides during the relatively selective modification of tryptophan residues in proteins. Therefore, a series of suicide substrates (a subtype of mechanism-based inhibitors) that produce quinone or quinonimine methides (QIMs) have been designed to inhibit enzymes. The concept of mechanism-based inhibitors was very appealing and has been widely applied. The present review will be focused on the inhibition of mammalian serine proteases and bacterial serine (3-lactamases by suicide inhibitors. These very different classes of enzymes have however an analogous step in their catalytic mechanism, the formation of an acyl-enzyme intermediate. Several studies have examined the possible use of quinone or quinonimine methides as the latent... 

FIGURE 11.4 Structures of some functionalized lactones 1-3 that are general suicide substrates of proteases. 

Finally, coumarin derivatives may act as general inhibitors of serine proteases or as specific inhibitors of human leukocyte elastase, depending on the nature of the substituents, through two distinct mechanisms, suicide substrates (a-chymotrypsin)... 

SCHEME 11.3 Postulated mechanisms for the inhibition of serine proteases by coumarin derivatives. NuH nucleophile. Pathway a suicide-type inactivation (suicide substrate). Pathway b transient inactivation by formation of a stable acyl-enzyme (alternate substrate-inhibitor). 

A new series of unfunctionalized (17) and functionalized (18) 3,4-dihydrocoumarins (Fig. 11.11) was synthesized. These new benzopyranones differ from the previous neutral dihydrocoumarins, which are suicide substrates of proteinases (Section 11.4, in that they have a carboxy substituent on their aromatic ring and a side chain phenylacetamido group at the 3-position of the heterocycle instead of a benzyl one in compound 3. 

With a 3,3-heterodihalogeno substitution of the (3-lactam ring, a selective interaction of each enantiomer of the chiral azetidinone with the enzyme active site is expected. The enantiomer 3R of the 3F, 3Br derivative indeed has a more favorable kinetic parameter k-JK, than the enantiomer 3S.33 The partition ratio kCA /kt (=k3/k4, Eq. 11.1) for the inactivation is also higher. Therefore, enantiomer 3R is a better suicide substrate for HLE since a lower partition ratio corresponds to abetter suicide substrate.20... 

Walsh, C. T. Suicide substrates mechanism-based enzyme inactivators recent developments. Ann. Rev. Biochem. 1984, 53, 493-535. 

Waley, S. G. Kinetic of suicide substrates, practical procedures for determining parameters. Biochem. J. 1985, 227, 843-849. 

Reboud-Ravaux, M. Vilain, A. C. Boggetto, N. Maillard, J.-L. Favreau, C. Xie, J. Mazaleyrat, J.-P. Wakselman, M. A cyclopeptidic suicide substrate preferentially inactivates urokinase-type plasminogen activator. Biochem. Biophys. Res. Commun. 1991, 178, 352-359. 

Vergely, I. Laugaa, P. Reboud-Ravaux, M. Interaction of human leukocyte elastase with a /V-aryl azetidinone suicide substrate conformational analyses based on the mechanism of action of serine proteinases. j. Mol. Graphics 1996, 14, 158-167. 

The biological activity of a compound can often be affected dramatically by the presence of even a single fluorine substituent that is placed in a particular position within the molecule. There are diverse reasons for this, which have been discussed briefly in the preface and introduction of this book. A few illustrative examples of bioactive compounds containing a single fluorine substituent are given in Fig. 3.1. These include what is probably the first example of enhanced bioactivity due to fluorine substitution, that of the corticosteroid 3-1 below wherein Fried discovered, in 1954, that the enhanced acidity of the fluorohydrin enhanced the activity of the compound.1 Also pictured are the antibacterial (3-fluoro amino acid, FA (3-2), which acts as a suicide substrate enzyme inactivator, and the well-known anti-anthrax drug, CIPRO (3-3). 

---