Pyruvate oxidase reactions

A tri-enzymatic sensing layer based on kinase-oxidase activities for the detection of acetate was also described. A reaction sequence using acetate kinase, pyruvate kinase and pyruvate oxidase enabled the production of H2O2 in response to acetate injection in the range 10 pM - 100 mM59. 

A FIA system has been proposed for the CL detection of phosphate based on an enzymatic reaction and the application of a subsequent luminol reaction [41], The system consists of an immobilized pyruvate oxidase column, a mixing chamber for the CL reaction, and a PMT. H202 is generated by the reaction of phosphate and pyruvate oxidase and then reacts with luminol and HRP, producing... 

By 1998, X-ray structures had been determined for four thiamin diphosphate-dependent enzymes (1) a bacterial pyruvate oxidase,119120 (2) yeast and bacterial pyruvate decarboxylases,121 122c (3) transketolase,110123124 and (4) benzoylformate decarboxylase.1243 Tire reactions catalyzed by these enzymes are all quite different, as are the sequences of the proteins. However, the thiamin diphosphate is bound in a similar way in all of them. 

A related reaction that is known to proceed through acetyl-TDP is the previously mentioned bacterial pyruvate oxidase. As seen in Fig. 14-2, this enzyme has its own oxidant, FAD, which is ready to accept the two electrons of Eq. 14-22 to produce bound acetyl-TDP. The electrons may be able to jump directly to the FAD, with thiamin and flavin radicals being formed at an intermediate stage.1353 The electron transfers as well as other aspects of oxidative decarboxylation are discussed in Chapter 15, Section C. 

Pyruvate oxidase. The soluble flavoprotein pyruvate oxidase, which was discussed briefly in Chapter 14 (Fig. 14-2, Eq. 14-22), acts together with a membrane-bound electron transport system to convert pyruvate to acetyl phosphate and C02.319 Thiamin diphosphate is needed by this enzyme but lipoic acid is not. The flavin probably dehydrogenates the thiamin-bound intermediate to 2-acetylthiamin as shown in Eq. 15-34. The electron acceptor is the bound FAD and the reaction may occur in two steps as shown with a thiamin diphosphate radical intermediate.3193 Reaction with inorganic phosphate generates the energy storage metabolite acetyl phosphate. 

Coupling of a second enzyme reaction NAD(P)H+02->NADH oxidase NAD(P)++H20a->H202 monitoring [26] (For the particular case of lactate dehydrogenase, where pyruvate is one of the reaction products, pyruvate oxidase or pyruvate transaminase has been coupled to the main enzyme reaction) [23,27]... 

Other types of enzymes When no oxidase or dehydrogenase is available for a target analyte, other types of enzymes have been used for biospedfic recognition e.g. for citric acid detection, citrate lyase, and amperometric detection was possible by coupling to two more enzymatic reactions oxaloacetate decarboxylase and pyruvate oxidase, which convert citric add into H2O2 with the latter being monitored amperometrically with an H202 probe. For detection of acetic add, acetate kinase is used, coupled to pyruvate kinase and pyruvate oxidase [34,35]. 

The expected result was obtained since n-amino acid oxidase converted )8-chloroalanine to pyruvate under anaerobic conditions, to chloropyruvate at high O2 concentrations, and to mixtures of these at intermediate O2 concentrations. Under steady state conditions, the reaction behaved as if cleavage of the a C-H bond were the rate-limiting process in turnover, although stopped-flow spectrophotometric measurements showed that this interpretation can not be entirely correct in this case (53) or in the case of )8-choloro-a-aminobutyrate (54), a-yS-Elimination has now been observed in three flavoprotein oxidase reactions (54) and can be considered strong circumstantial evidence for a-proton removal from compounds which closely resemble the physiological substrates. 

Several aaRS-like proteins are involved in metabobc pathways (1). For example, E. coli asparagine synthase, an aspartyl-tRNA synthetase (AspRS)-like enzyme, catalyzes the synthesis of asparagine from aspartate and ATP. A paralog of LysRS-II, called PoxA/GenX, is important for pyruvate oxidase activity in E. coli and Salmonella typhimurium and for virulence in S. typhimurium. The E. coli biotin synthetase/repressor protein (BirA), which has a domain that resembles structurally the seryl-tRNA synthetase (SerRS) catalytic domain, activates biotin to modify posttranslationaUy various metabolic proteins involved in carboxylation and decarboxylation. BirA can also bind DNA and regulate its own transcription using biotin as a corepressor. A histidyl-tRNA synthetase (HisRS)-hke protein from Lactococcus lactis, HisZ is involved in the allosteric activation of the phosphoribosyl-transferase reaction. 

Pyruvate oxidase (Pyox) is a FAD- and thiamine diphosphate (ThDP)-dependent enzyme that catalyzes the reaction of pyruvate to give acetyl phosphate or vice versa (see Fig. 15). If used in the oxidative way, it can be activated and reactivated under nonaerobic conditions using ferrocene mediators. Kinetic parameters of the indirect electrochemical process using the enzyme incorporated into a biomimetic supported bilayer at a gold electrode have been reported [142]. Similarly, FAD-dependent amino oxidases may also be applied. 

Lactate is usually determined by photometric detection of NADH formed in the reaction catalyzed by lactate dehydrogenase (LDH, EC 1.1.1.27). The pH optimum for the forward reaction of LDH (MW 135 000) is about 9, the Km for lactate 6.7 mmolA. Since the equilibrium lies far to the left (K = 2.76-10-5 mol/1 at pH 7.0), hydrazine, pyruvate oxidase, or alanine aminotransferase have to be added to trap the pyruvate formed. 

The different cosubstrate specificities of the lactate-oxidizing enzymes offer the use of a great variety of electrochemical indicator reactions in membrane sensors. In enzyme electrodes based on LDH the biochemical reaction has been coupled to the electrode via NADH oxidation, either directly or by using mediators or additional enzymes (see Section 3.2.1). This leads to a shift of the unfavorable reaction equilibrium by partial trapping of the reduced cofactor. Such a shift has also been achieved by using pyruvate oxidase coimmobilized with LDH (Mizutani, 1982). 

Pyruvate can be assayed by using the reactions catalyzed by lactate dehydrogenase and pyruvate oxidase (PyOD, EC 1.2.3.3) ... 

In these reactions, the C2-atom of ThDP must be deprotonated to allo v this atom to attack the carbonyl carbon of the different substrates. In all ThDP-dependent enzymes this nucleophilic attack of the deprotonated C2-atom of the coenzyme on the substrates results in the formation of a covalent adduct at the C2-atom of the thiazolium ring of the cofactor (Ila and Ilb in Scheme 16.1). This reaction requires protonation of the carbonyl oxygen of the substrate and sterical orientation of the substituents. In the next step during catalysis either CO2, as in the case of decarboxylating enzymes, or an aldo sugar, as in the case of transketo-lase, is eliminated, accompanied by the formation of an a-carbanion/enamine intermediate (Ilia and Illb in Scheme 16.1). Dependent on the enzyme this intermediate reacts either by elimination of an aldehyde, such as in pyruvate decarboxylase, or with a second substrate, such as in transketolase and acetohydroxyacid synthase. In these reaction steps proton transfer reactions are involved. Furthermore, the a-carbanion/enamine intermediate (Ilia in Scheme 16.1) can be oxidized in enzymes containing a second cofactor, such as in the a-ketoacid dehydrogenases and pyruvate oxidases. In principal, this oxidation reaction corresponds to a hydride transfer reaction. 

In the next section, the mechanism of the C2-H deprotonation of ThDP in enzymes is considered, followed by a discussion of the proton transfer reactions during catalysis. Finally, the oxidation mechanism of the a-carbanion/enamine intermediate in pyruvate oxidase is discussed. 

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