Polarized optical spectroscopy

A diagrannnatic approach that can unify the theory underlymg these many spectroscopies is presented. The most complete theoretical treatment is achieved by applying statistical quantum mechanics in the fonn of the time evolution of the light/matter density operator. (It is recoimnended that anyone interested in advanced study of this topic should familiarize themselves with density operator fonnalism [8, 9, 10, H and f2]. Most books on nonlinear optics [13,14, f5,16 and 17] and nonlinear optical spectroscopy [18,19] treat this in much detail.) Once the density operator is known at any time and position within a material, its matrix in the eigenstate basis set of the constituents (usually molecules) can be detennined. The ensemble averaged electrical polarization, P, is then obtained—tlie centrepiece of all spectroscopies based on the electric component of the EM field. 

An interesting feature of polarized IR spectroscopy is that rapid measurements can be performed while preserving molecular information (in contrast with birefringence) and without the need for a synchrotron source (X-ray diffraction). Time-resolved IRLD studies are almost exclusively realized in transmission because of its compatibility with various types of tensile testing devices. In the simplest implementation, p- and s-polarized spectra are sequentially acquired while the sample is deformed and/or relaxing. The time resolution is generally limited to several seconds per spectrum by the acquisition time of two spectra and by the speed at which the polarizer can be rotated. Siesler et al. have used such a rheo-optical technique to study the dynamics of multiple polymers and copolymers [40]. 

Other optical and spectroscopic techniques are also important, particularly with regard to segmental orientation. Some examples are fluorescence polarization, deuterium nuclear magnetic resonance (NMR), and polarized IR spectroscopy [4,246,251]. Also relevant here is some work indicating that microwave techniques can be used to image elastomeric materials, for example, with regard to internal damage [252,253]. 

A rigorous and complete mathematical treatment of the polarization of light and the interaction of light with oriented matter is outside the scope of this chapter. These subjects have been thoroughly dealt with before and can be found in a number of comprehensive texts [29-32] the reader is referred to the excellent book by Michl and Thulstrup [3] for a more detailed treatment of optical spectroscopy with polarized light. Here, a conventional, qualitative representation is given to establish the nomenclature and conventions to be used and to facilitate the understanding of the concepts presented. 

Macgregor R. B. and Weber G. (1986) Estimation of the Polarity of the Protein Interior by Optical Spectroscopy, Nature 319, 70-73. 

Probing Metalloproteins Electronic absorption spectroscopy of copper proteins, 226, 1 electronic absorption spectroscopy of nonheme iron proteins, 226, 33 cobalt as probe and label of proteins, 226, 52 biochemical and spectroscopic probes of mercury(ii) coordination environments in proteins, 226, 71 low-temperature optical spectroscopy metalloprotein structure and dynamics, 226, 97 nanosecond transient absorption spectroscopy, 226, 119 nanosecond time-resolved absorption and polarization dichroism spectroscopies, 226, 147 real-time spectroscopic techniques for probing conformational dynamics of heme proteins, 226, 177 variable-temperature magnetic circular dichroism, 226, 199 linear dichroism, 226, 232 infrared spectroscopy, 226, 259 Fourier transform infrared spectroscopy, 226, 289 infrared circular dichroism, 226, 306 Raman and resonance Raman spectroscopy, 226, 319 protein structure from ultraviolet resonance Raman spectroscopy, 226, 374 single-crystal micro-Raman spectroscopy, 226, 397 nanosecond time-resolved resonance Raman spectroscopy, 226, 409 techniques for obtaining resonance Raman spectra of metalloproteins, 226, 431 Raman optical activity, 226, 470 surface-enhanced resonance Raman scattering, 226, 482 luminescence... 

For polarized IR spectroscopy, one must consider crystal optics. If the crystal is birefringent, the optical disturbance is usually perturbed in some cases it is not even perpendicular to the direction of propagation. This could pose severe problems with some crystals, but our measurements of refractive index... 

Key words dental, oral cavity, cancer, microorganisms, materials characterization, enamel, caries, polarized Raman spectroscopy, optical coherence tomography, clinic, fibre optics... 

Abbreviations PRS - polarized Raman spectroscopy, OCT - optical coherence tomography... 

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