Organic chemistry representing molecules

Alkenes are hydrocarbons that contain a carbon-carbon double bond A carbon-carbon double bond is both an important structural unit and an important func tional group m organic chemistry The shape of an organic molecule is influenced by the presence of this bond and the double bond is the site of most of the chemical reactions that alkenes undergo Some representative alkenes include isobutylene (an industrial chemical) a pmene (a fragrant liquid obtained from pine trees) md fame sene (a naturally occurring alkene with three double bonds)... 

The derivatives of the aminophenols have important uses both in the photographic and the pharmaceutical industries. They are also extensively employed as precursors and intermediates in the synthesis of more compHcated molecules, especially those used in the staining and dye industry. All of the major classes of dyes have representatives that incorporate substituted aminophenols these compounds produced commercially as dye intermediates have been reviewed (157). Details of the more commonly encountered derivatives of the aminophenols can be found in standard organic chemistry texts (25,158). A few examples, which have specific uses or are manufactured in large quantities, are discussed in detail in the following (see Table 6). 

In the present work a theory for the facile construction of complex molecular orbitals from bond and group orbitals is presented and complemented by accurate drawings of the valence molecular orbitals for over one hundred molecules representing a wide range of connectivities and functional groupings. Direct applications to phenomena in organic chemistry are also discussed. 

The 1,3-dipolar eyeloaddition, also known as the Huisgen cycloaddition, is a elassie reaetion in organic chemistry consisting in the reaetion of a dipolar-ophile with a 1,3-dipolar compound that allows the produetion of various five-membered heteroeyeles. This reaction represents one of the most productive fields of modern synthetic organic chemistry. Most dipolarophiles are alkenes, alkynes, and molecules possessing related heteroatom functional... 

One of the most popular of the semi-empirical LCAO methods is that of Hfickel. It is applicable to planar molecules which have n -electron systems. The delocalization of these systems, as treated by this method, has particular chemical significance. The traditional application is to the benzene molecule. Historically, different structures of this molecule were suggested by K6kuI6+ and by Dewar that are described in virtually all textbooks of organic chemistry. These structures represented the first efforts to represent the delocalization of the 3r orbitals in such systems. In the present context the delocalization can be better specified with the use of the method of Hilckel. 

A very useful class of intermediates in synthetic organic chemistry are carbenes CX2 (X = H, R, F, Cl, Br etc.)13). These molecules are typical representatives of molecular, monomeric, highly reactive and electronically unsaturated compounds. Their main characteristics are the following ... 

The approach adopted is to view the molecule in three dimensions, imagining each atom or group to be placed at a vertex of hn appropriate polyhedron. In organic chemistry this is usually the tetrahedron with carbon at the centre. Table 3.3 (p. 18) shows the polyhedra normally encountered in organic and inorganic chemistry. It also includes for each polyhedron the polyhedral symbols to denote shape and coordination number. It is to be noted that these polyhedra are often presented in a highly formalised fashion. An octahedron is often represented with the apices rather than the octahedral faces depicted, thus ... 

Projections are used, particularly in organic chemistry, to represent three-dimensional molecules in two dimensions. In a Fischer projection, the atoms or groups of atoms attached to a tetrahedral centre are projected onto the plane of the paper from such an orientation that atoms or groups appearing above or below the... 

It is remarkable that, in the space of less than two decades, the structural theory of organic chemistry should have moved from the first hesitant steps, where the chemical structure was considered to be separate and distinct from the physical structure of the molecule, and represented only the "affinities" of the atoms within the molecule, to the point where those same formulas were now viewed as representations of the actual physical locations of the atoms in the molecule (76). What was left undone at the end of the nineteenth century, by which time three-dimerrsional graphical formitlas for organic compoimds were in routine use, was, of coruse, a description of exactly what the "chemical affinities" of the atoms composing the molecules were. The answer to this problem would have to await the new century, and the development of modem theories of the atom and bonding. 

Actual molecules do not in any way look like the ball-and-stick models. The sharing of electrons in the covalent bonds requires that the atoms of the molecule overlap as represented in Figure 1-5. However, the ball-and-stick models will suffice for our understanding of structural organic chemistry. 

Line structures also can be modified to represent the three-dimensional shapes of molecules, and the way that this is done will be discussed in detail in Chapter 5. At the onset of your study of organic chemistry, you should write out the formulas rather completely until you are thoroughly familiar with what these abbreviations stand for. 

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