Nuclear Overhauser

Neuhaus D and Williamson M 1989 The Nuclear Overhauser Effect in Structural and Conformational Analysis (New York VCH)... 

For large molecules, such as proteins, the main method in use is a 2D technique, called NOESY (nuclear Overhauser effect spectroscopy). The basic experiment [33, 34] consists of tluee 90° pulses. The first pulse converts die longitudinal magnetizations for all protons, present at equilibrium, into transverse magnetizations which evolve diirhig the subsequent evolution time In this way, the transverse magnetization components for different protons become labelled by their resonance frequencies. The second 90° pulse rotates the magnetizations to the -z-direction. 

Noggle J H and Schirmer R E 1971 The Nuclear Overhauser Effect (New York Academic)... 

Neuhaus D 1998 Nuclear Overhauser effect Encyclopedia of Nuclear Magnetic Resonance ed D M Grant and R K Harris (Chichester Wiley) pp 3290-301... 

You can often use experimental data, such as Nuclear Overhauser Effect (NOE) signals from 2D NMR studies, as restraints. NOE signals give distances between pairs of hydrogens in a molecule. Use these distances to limit distances during a molecular mechanics geometry optimization or molecular dynamics calculation. Information on dihedral angles, deduced from NMR, can also limit a conformational search. 

The 2-D nuclear Overhauser effect spectroscopy (2-D-NOESY) experiment resembles the COSY however, the cross-peaks arise from... 

Another technique often used to examine the stmcture of double-heUcal oligonucleotides is two-dimensional nmr spectroscopy (see AfAGNETiC SPIN resonance). This method rehes on measurement of the nuclear Overhauser effects (NOEs) through space to determine the distances between protons (6). The stmcture of an oligonucleotide may be determined theoretically from a set of iaterproton distances. As a result of the complexities of the experiment and data analysis, the quality of the stmctural information obtained is debated. However, nmr spectroscopy does provide information pertaining to the stmcture of DNA ia solution and can serve as a complement to the stmctural information provided by crystallographic analysis. 

Nuclear Overhauser enhancement (NOE) spectroscopy has been used to measure the through-space interaction between protons at and the protons associated with the substituents at N (20). The method is also useful for distinguishing between isomers with different groups at and C. Reference 21 contains the chemical shifts and coupling constants of a considerable number of pyrazoles with substituents at N and C. NOE difference spectroscopy ( H) has been employed to differentiate between the two regioisomers [153076 5-0] (14) and [153076 6-1] (15) (22). N-nmr spectroscopy also has some utility in the field of pyrazoles and derivatives. 

N-protonation the absolute magnitude of the Ad values is larger than for Af-methylation <770MR(9)53>. Nuclear relaxation rates of and have been measured as a function of temperature for neat liquid pyridazine, and nuclear Overhauser enhancement has been used to separate the dipolar and spin rotational contributions to relaxation. Dipolar relaxation rates have been combined with quadrupole relaxation rates to determine rotational correlation times for motion about each principal molecular axis (78MI21200). NMR analysis has been used to determine the structure of phenyllithium-pyridazine adducts and of the corresponding dihydropyridazines obtained by hydrolysis of the adducts <78RTC116>. 

The nonnal mode NMR refinement method of Brueschweiler and Case [50] can be applied to experimentally measurable quantities such as order parameters or nuclear Overhauser spectroscopy (NOSEY) intensities. Unlike the X-ray case, the expression of these quanti-... 

Although experimental studies of DNA and RNA structure have revealed the significant structural diversity of oligonucleotides, there are limitations to these approaches. X-ray crystallographic structures are limited to relatively small DNA duplexes, and the crystal lattice can impact the three-dimensional conformation [4]. NMR-based structural studies allow for the determination of structures in solution however, the limited amount of nuclear overhauser effect (NOE) data between nonadjacent stacked basepairs makes the determination of the overall structure of DNA difficult [5]. In addition, nanotechnology-based experiments, such as the use of optical tweezers and atomic force microscopy [6], have revealed that the forces required to distort DNA are relatively small, consistent with the structural heterogeneity observed in both DNA and RNA. 

The main contribution to the spin-lattice relaxation of C nuclei which are connected to hydrogen is provided by the dipole-dipole interaction (DD mechanism, dipolar relaxation). For such C nuclei a nuclear Overhauser enhancement of almost 2 will be observed during H broadband decoupling according to ... 

The difference between 2-CH2 and 6-CH2 is shown by the nuclear Overhauser enhancement (NOE) on the proton at Su = 6.67, if the methylene protons at 5 = 2.87 are irradiated. The assignment of the methylene C atoms can be read from the CH COSY segment. The C atoms which are in close proximity to one another at 5c = 113.3 and 113.8 belong to C-5 and C-7. Carbon atom C-5 is distinguished from C-7 by the pseudo-quartet splitting CJqh = 3.4 Hz to 1-H and A-H2) that involves the methylene group in the ortho position. 

In decoupling the methyl protons, the NOE difference spectrum shows a nuclear Overhauser enhancement on the cyclopropane proton at = 1.60 and on the terminal vinyl proton with trans coupling at <5// = 5.05 and, because of the geminal coupling, a negative NOE on the other terminal proton at Sh= 4.87. This confirms the trans configuration G. In the cis isomer H no NOE would be expected for the cyclopropane proton, but one would be expected for the alkenyl-// in the a-position indicated by arrows in H. 

NOE Nuclear Overhauser effect, change of signal intensities (integrals) dining decoupling experiments decreasing with spatial distance of nuclei... 

NOESY Nuclear Overhauser effect spectroscopy, detection of NOE in the HH COSY square format, traces out closely spaced protons in larger molecules... 

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