Mass FTICR

Other types of mass spectrometer may use point, array, or both types of collector. The time-of-flight (TOF) instrument uses a special multichannel plate collector an ion trap can record ion arrivals either sequentially in time or all at once a Fourier-transform ion cyclotron resonance (FTICR) instrument can record ion arrivals in either time or frequency domains which are interconvertible (by the Fourier-transform technique). 

An added consideration is that the TOF instruments are easily and quickly calibrated. As the mass range increases again (m/z 5,000-50,000), magnetic-sector instruments (with added electric sector) and ion cyclotron resonance instruments are very effective, but their prices tend to match the increases in resolving powers. At the top end of these ranges, masses of several million have been analyzed by using Fourier-transform ion cyclotron resonance (FTICR) instruments, but such measurements tend to be isolated rather than targets that can be achieved in everyday use. 

FTICR. Fourier-transform ion cyclotron resonance GC/IRMS. gas chromatography isotope ratio mass spectrometry... 

To check the identity and purity of the products obtained in the above reactions it is not sufficient to analyze for the sulfur content since a mixture may incidentally have the same S content. Either X-ray diffraction on single crystals or Raman spectra of powder-like or crystalline samples will help to identify the anion(s) present in the product. However, the most convincing information comes from laser desorption Fourier transform ion cyclotron resonance (FTICR) mass spectra in the negative ion mode (LD mass spectra). It has been demonstrated that pure samples of K2S3 and K2S5 show peaks originating from S radical anions which are of the same size as the dianions in the particular sample no fragment ions of this type were observed [28]. 

Resolution does not affect the accuracy of the individual accurate mass measurements when no separation problem exists. When performing accurate mass measurements on a given component in a mixture, it may be necessary to raise the resolution of the mass spectrometer wherever possible. Atomic composition mass spectrometry (AC-MS) is a powerful technique for chemical structure identification or confirmation, which requires double-focusing magnetic, Fourier-transform ion-cyclotron resonance (FTICR) or else ToF-MS spectrometers, and use of a suitable reference material. The most common reference materials for accurate mass measurements are perfluorokerosene (PFK), perfluorotetrabutylamine (PFTBA) and decafluorotriph-enylphosphine (DFTPP). One of the difficulties of high-mass MS is the lack of suitable calibration standards. Reference inlets to the ion source facilitate exact mass measurement. When appropriately calibrated, ToF mass... 

B magnetic sector E = electric sector Q = quadrupole mass filter ToF = time-of-flight mass spectrometer IT = ion trap FTICR = Fourier-transform ion-cyclotron resonance. 

Figure 6.17 Temperature-resolved in-source pyrolysis FTICR-MS of flame-retarded polystyrene (56 spectra with a sampling interval of 1.1 s) from 300 K to 1200K. After Heeren and Boon [224], Reprinted from International Journal of Mass Spectrometry and Ion Processes, 157/158, R.M.A. Heeren and J.J. Boon, 391-403, Copyright (1996), with permission from Elsevier...

FTICR-MS is capable of powerful mixture analysis, due to its high mass range and ultrahigh mass resolving power. However, in many cases it is still desirable to couple a chromatographic interface to the mass spectrometer for sample purification, preconcentration, and mixture separation. In the example given above, DTMS under HRMS conditions provides the elementary composition. Apart from DTMS, PyGC-MS can be performed to preseparate the mixture of molecules and to obtain the MS spectrum of a purified unknown. Direct comparison with the pure reference compound remains the best approach to obtain final proof. 

The use of CIEF in combination with FTICR has been demonstrated in an analysis of the E. coli proteome (Jensen et al., 1999). For these experiments, E. coli was grown in a medium depleted of rare isotopes in order to increase the mass measurement accuracy. The high abundance isotopes are present at approximately 98.89% 12C, 99.63% 14N and 99.985% H. For peptides, the presence of rare isotopes does not significantly change the spectra but with undigested proteins, mass accuracy can be limited by the broadened distribution of ions of any given protein due to the incorporation... 

Currently PCR and mass spectrometry are performed by two separate instruments. However, there is no reason why PCR followed by simple automated cleanup and mass spectrometry cannot be incorporated into a single integrated instrument. Essentially every configuration of the modern ESI mass spectrometer has been used successfully for the analysis of PCR products, from the highest to the lowest resolution involving. Fourier transform ion cyclotron resonance (FTICR), triple quadrupole, quadrupole-time of flight (Q-TOF), and ion trap.22-24 MS discriminates between two structurally related PCR products by MW difference. Mass accuracy is needed to differentiate the... 

Different mass analysers can be combined with the electrospray ionization source to effect analysis. These include magnetic sector analysers, quadrupole filter (Q), quadrupole ion trap (QIT), time of flight (TOF), and more recently the Fourrier transform ion cyclotron resonance (FTICR) mass analysers. Tandem mass spectrometry can also be effected by combining one or more mass analysers in tandem, as in a triple quadrupole or a QTOF. The first analyzer is usually used as a mass filter to select parent ions that can be fragmented and analyzed by subsequent analysers. 

Masselon, C. Tolmechev, A. V. Anderson, G. A. Harkewicz, R. Smith, R. D. Mass measurement errors caused by local frequency perturbations in FTICR mass spectrometry. J. Am. Soc. Mass Spectrom. 2002,13, 99-107. 

Shen, Y., Tolic, N., Zhao, R., Pasa-Tolic, L., Li, L., Berger, S.J., Harkewicz, R., Anderson, G.A., Belov, M.E., Smith, R.D. (2001). High-throughput proteomics using high efficiency multiple-capillary liquid chromatography with on-line high performance ESI FTICR mass spectrometry. Anal. Chem. 73, 3011-3021. 

Kalkhof, S., Haehn, S., Ihling, C., Smyth, N., and Sinz, A. (2005b) Probing laminin self-interaction using isotope-labeled cross-linkers and ESI-FTICR mass spectrometry. Poster, Pierce Biotechnology web site. 

Sinz, A., Kalkhof, S., and Ihling, C. (2005) Mapping protein interfaces by a trifunctional cross-linker combined with MALDI-TOF and ESI-FTICR mass spectrometry. /. Am. Soc. Mass Spectrom. 16(12), 1921-1931. 

Mass analyzers interrogate and resolve ions produced by an ion source based on their m/z ratios. Several types of mass analyzers are utilized for proteomic analysis including time-of-flight (TOF) quadrupoles, ion traps, and Fourier transform ion cyclotron resonance (FTICR). Mass analyzers may be assembled in hybrid configurations. MS instruments such as quadrupole TOF and quadra-pole ion trap-FTICR facilitate diversified applications and achieved great success. 

The m/z values of peptide ions are mathematically derived from the sine wave profile by the performance of a fast Fourier transform operation. Thus, the detection of ions by FTICR is distinct from results from other MS approaches because the peptide ions are detected by their oscillation near the detection plate rather than by collision with a detector. Consequently, masses are resolved only by cyclotron frequency and not in space (sector instruments) or time (TOF analyzers). The magnetic field strength measured in Tesla correlates with the performance properties of FTICR. The instruments are very powerful and provide exquisitely high mass accuracy, mass resolution, and sensitivity—desirable properties in the analysis of complex protein mixtures. FTICR instruments are especially compatible with ESI29 but may also be used with MALDI as an ionization source.30 FTICR requires sophisticated expertise. Nevertheless, this technique is increasingly employed successfully in proteomics studies. 

DGE a AC AMS APCI API AP-MALDI APPI ASAP BIRD c CAD CE CF CF-FAB Cl CID cw CZE Da DAPCI DART DC DE DESI DIOS DTIMS EC ECD El ELDI EM ESI ETD eV f FAB FAIMS FD FI FT FTICR two-dimensional gel electrophoresis atto, 10 18 alternating current accelerator mass spectrometry atmospheric pressure chemical ionization atmospheric pressure ionization atmospheric pressure matrix-assisted laser desorption/ionization atmospheric pressure photoionization atmospheric-pressure solids analysis probe blackbody infrared radiative dissociation centi, 10-2 collision-activated dissociation capillary electrophoresis continuous flow continuous flow fast atom bombardment chemical ionization collision-induced dissociation continuous wave capillary zone electrophoresis dalton desorption atmospheric pressure chemical ionization direct analysis in real time direct current delayed extraction desorption electrospray ionization desorption/ionization on silicon drift tube ion mobility spectrometry electrochromatography electron capture dissociation electron ionization electrospray-assisted laser desorption/ionization electron multiplier electrospray ionization electron transfer dissociation electron volt femto, 1CT15 fast atom bombardment field asymmetric waveform ion mobility spectrometry field desorption field ionization Fourier transform Fourier transform ion cyclotron resonance... 

Ion detection is carried out using image current detection with subsequent Fourier transform of the time-domain signal in the same way as for the Fourier transform ion cyclotron resonance (FTICR) analyzer (see Section 2.2.6). Because frequency can be measured very precisely, high m/z separation can be attained. Here, the axial frequency is measured, since it is independent to the first order on energy and spatial spread of the ions. Since the orbitrap, contrary to the other mass analyzers described, is a recent invention, not many variations of the instrument exist. Apart from Thermo Fischer Scientific s commercial instrument, there is the earlier setup described in References 245 to 247. 

Performance Parameters. Typical resolving power for the commercial instrument is up to about 130,000 (FWHM) for m/z 400 Th. The mass resolving power is m/z dependent it decreases with fmfz (see the FTICR, described in Section 2.2.6, which decreases linearly with m/z). 

The orbitrap mass accuracy is better than all quadmpoles and TOF instruments just right after the FTICR and sector instruments, that is, around 2 ppm with internal calibration [248]. 

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