Ionic strength volumes

The reaction requires single-stranded nucleic acid (RNA or DNA), an acid pH, and temperatures of 40° or higher. Other conditions, such as time of reaction, ionic strength, volume, concentration of iodine, TICI3, and nucleic acid, can be varied over a wide range to accommodate the specific purposes for which labeling is being done. 

The Debye-Htickel limiting law predicts a square-root dependence on the ionic strength/= MTLcz of the logarithm of the mean activity coefficient (log y ), tire heat of dilution (E /VI) and the excess volume it is considered to be an exact expression for the behaviour of an electrolyte at infinite dilution. Some experimental results for the activity coefficients and heats of dilution are shown in figure A2.3.11 for aqueous solutions of NaCl and ZnSO at 25°C the results are typical of the observations for 1-1 (e.g.NaCl) and 2-2 (e.g. ZnSO ) aqueous electrolyte solutions at this temperature. 

Capillary Electrophoresis. Capillary electrophoresis (ce) is an analytical technique that can achieve rapid high resolution separation of water-soluble components present in small sample volumes. The separations are generally based on the principle of electrically driven ions in solution. Selectivity can be varied by the alteration of pH, ionic strength, electrolyte composition, or by incorporation of additives. Typical examples of additives include organic solvents, surfactants (qv), and complexation agents (see Chelating agents). 

In preparing any of the above for use in columns, the dry powder is evacuated, then mixed under reduced pressure with water or the appropriate buffer solution. Alternatively it is stirred gently with the solution until all air bubbles are removed. Because some of the wet powders change volumes reversibly with alteration of pH or ionic strength (see above), it is imperative to make allowances when packing columns (see above) in order to avoid overflowing of packing when the pH or salt concentrations are altered. 

Tailing peaks or longer than expected elution volumes are sometimes caused by low solubility of the protein in the mobile phase. Using a trial-and-error process, select the proper pFf and ionic strength to address this problem. Detergents such as sodium dodecyl sulfate (SDS) are sometimes helpful but, because they change the conformation of many proteins and are difficult to remove from the column should be used only if other methods fail. 

In the development of a SE-HPLC method the variables that may be manipulated and optimized are the column (matrix type, particle and pore size, and physical dimension), buffer system (type and ionic strength), pH, and solubility additives (e.g., organic solvents, detergents). Once a column and mobile phase system have been selected the system parameters of protein load (amount of material and volume) and flow rate should also be optimized. A beneficial approach to the development of a SE-HPLC method is to optimize the multiple variables by the use of statistical experimental design. Also, information about the physical and chemical properties such as pH or ionic strength, solubility, and especially conditions that promote aggregation can be applied to the development of a SE-HPLC assay. Typical problems encountered during the development of a SE-HPLC assay are protein insolubility and column stationary phase... 

Chen R.H., Chen W.Y., Wang S.T., Hsu C.H., Tsai M.L. 2009. Changes in the Mark-Houwink hydrodynamic volume of chitosan molecules in solutions of different organic acids, at different temperatures and ionic strengths. Carbohydrate Polymers 78, 902-907. 

Table II also shows the effect of electrolyte concentration on Rf and kj. Both effects reflect the fact that at the higher ionic strengths particle/substrate repulsion is decreased, thus effectively increasing the available pore volume at a given particle size. These results are illustrated in Figure 3. Included in this figure are data from work by Nagy (14) with a column set similar in configuration to that employed here.

This behavior shows that the dimensions of these polymers are independent of pH, ionic strength (in the ranges studied) and presence or absence of Tergitol or polyethyleneoxide. This result is of considerable help in interpretation of GPC behavior since in the absence of polymer-glass substrate interactions, the molecular weight calibration curves (log MW vs. elution volume) should be independent of pH, ionic strength or the two nonionic surfactants investigated. 

As can be seen from Figure 2, pore permeation increases with ionic strength, but the curves are not linear and in particular show poor resolution at MW less thcui a million. Complete loss of resolution in this MW reuige is seen at 0.5 M NaCl reflecting, presumably total permeation. However the total permeated volume (as measured with NaCl) is significantly greater than the polymer elution voliame at 0.5 M NaCl. Such a volume difference could be explained if a fraction of the pores is inaccessible to even the lowest M.W. polymer investigated. 

In the presence of polyethylene oxide MW 300,000 at a concentration of 0.025 g liter , variations in pH and ionic strength have no effect on elution volumes and a single calibration curve is obtained as shown in Figure 4 and Table II. This behavior presumably also results from modification of the glass surface by the polyethylene oxide surfactant, but in this case charge effects appear to be completely suppressed and the effective pore diameter and volume reduced. Such an interpretation is also in accord with the fact that the elution voliomes are lower with polyethylene oxide than with Tergitol, since Tergitol is a much smaller molecule than the polyethylene oxide. 

The conformations adopted by polyelectrolytes under different conditions in aqueous solution have been the subject of much study. It is known, for example, that at low charge densities or at high ionic strengths polyelectrolytes have more or less randomly coiled conformations. As neutralization proceeds, with concomitant increase in charge density, so the polyelectrolyte chain uncoils due to electrostatic repulsion. Eventually at full neutralization such molecules have conformations that are essentially rod-like (Kitano et al., 1980). This rod-like conformation for poly(acrylic acid) neutralized with sodium hydroxide in aqueous solution is not due to an increase in stiffness of the polymer, but to an increase in the so-called excluded volume, i.e. that region around an individual polymer molecule that cannot be entered by another molecule. The excluded volume itself increases due to an increase in electrostatic charge density (Kitano et al., 1980). 

---