Haloalkanes structure

There are practically no limitations concerning haloalkane structure mono-and dihaloalkanes, esters of haloacetic acids, halonitriles, haloalkylamines, a-chloroethers, etc., can be used. 

Recognize a simple haloalkane, alcohol, ether, phenol, aldehyde, ketone, carboxylic acid, amine, amide, or ester, given a molecular structure. 

Aqueous solutions are not suitable solvents for esterifications and transesterifications, and these reactions are carried out in organic solvents of low polarity [9-12]. However, enzymes are surrounded by a hydration shell or bound water that is required for the retention of structure and catalytic activity [13]. Polar hydrophilic solvents such as DMF, DMSO, acetone, and alcohols (log P<0, where P is the partition coefficient between octanol and water) are incompatible and lead to rapid denaturation. Common solvents for esterifications and transesterifications include alkanes (hexane/log P=3.5), aromatics (toluene/2.5, benzene/2), haloalkanes (CHCI3/2, CH2CI2/I.4), and ethers (diisopropyl ether/1.9, terf-butylmethyl ether/ 0.94, diethyl ether/0.85). Exceptionally stable enzymes such as Candida antarctica lipase B (CAL-B) have been used in more polar solvents (tetrahydrofuran/0.49, acetonitrile/—0.33). Room-temperature ionic liquids [14—17] and supercritical fluids [18] are also good media for a wide range of biotransformations. 

Step 1 is fundamentally an SN2 reaction (kinetics related to structural variations of the reactants,16 8 retention of stereochemistry at phosphorus912), except in those instances wherein a particularly stable carbocation is produced from the haloalkane component.13 A critical experiment concerned with verification of the Sn2 character of Step 1 by inversion of configuration at the carbon from which the leaving group is displaced was inconclusive because elimination rather than substitution occurred with the chiral secondary haloalkane used.14 An alternative experiment suggested by us in our prior review using a chiral primary substrate apparently has not yet been performed.2... 

The reductive dehalogenation of haloalkanes has also been achieved in high yield using polymer supported hydridoiron tetracarbonyl anion (Table 11.15). In reactions where the structure of the alkyl group is such that anionic cleavage is not favoured, carbonylation of the intermediate alkyl(hydrido)iron complex produces an aldehyde (see Chapter 8) [3]. 

An alkyl halide (also known as a haloalkane) is an alkane in which one or more hydrogen atoms have been replaced with halogen atoms, such as F, Cl, Br, or I. The functional group of alkyl halides is R—X, where X represents a halogen atom. Alkyl halides are similar in structure, polarity, and reactivity to alcohols. To name an alkyl halide, first name the parent hydrocarbon. Then use the prefix fluoro-, chloro-, bromo-, or iodo-, with a position number, to indicate the presence of a fluorine atom, chlorine atom, bromine atom, or iodine atom. The following Sample Problem shows how to name an alkyl halide. 

Haloalkanes can be regarded as substituted alkanes in which one or more of the hydrogen atoms is replaced by a halogen atom. They are named in a similar fashion to branched-chain alkanes with the halogen atoms treated like branches. For example, the anaesthetic halothane has the structure shown in the diagram and is called 2-bromo-2-chloro-l,l, 1-trifluoroethane. 

One important factor that helps us to decide is the structure of the haloalkane, i.e. whether it is primary, secondary or tertiary. 

It is important to be able to look at a molecular structure and deduce the possible reactions it can undergo. Take an alkene, for example. It has a 7t bond that makes it electron-rich and able to attack electrophiles such as water, halogens and hydrogen halides in electrophilic addition reactions. Haloalkanes, on the other hand, contain polar carbon-halogen bonds because the halogen is more electronegative than carbon. This makes them susceptible to attack by nucleophiles, such as hydroxide, cyanide and alkoxide ions, in nucleophilic substitution reactions. 

E Small molecular weight compounds of diverse structures p-Nitrophenol Disulfiram Ethanol Many haloalkenes and haloalkanes nitrosamines, benzenes... 

According to the lUPAC system, alkyl halides are treated as alkanes with a halogen suhstituent. The halogen prefixes are fluoro-, chloro-, bromo- and iodo-. An alkyl halide is named as a haloalkane with an alkane as the parent structure. 

Table 14.11 Critical structural features which can affect the carcinogenicity of haloalkanes and substituted haloalkanes.

Fortunately, there is now a comprehensive body of knowledge on the metabolic reactions that produce reactive (toxic) intermediates, so the drug designer can be aware of what might occur, and take steps to circumvent the possibility. Nelson (1982) has reviewed the classes and structures of drugs whose toxicities have been linked to metabolic activation. Problem classes include aromatic and some heteroaromatic nitro compounds (which may be reduced to a reactive toxin), and aromatic amines and their N-acylated derivatives (which may be oxidized, before or after hydrolysis, to a toxic hydroxylamine or iminoquinone). These are the most common classes, but others are hydrazines and acyl-hydrazines, haloalkanes, thiols and thioureas, quinones, many alkenes and alkynes, benzenoid aromatics, fused polycyclic aromatic compounds, and electron-rich heteroaromatics such as furans, thiophenes and pyrroles. 

Figure 12-1 The active site structure of haloalkane dehalogenase from Xanthobacter autotrophicus with a molecule of bound dichloroethane. See Pries et al.13 The arrows illustrate the initial nucleophilic displacement. The D260 - H289 pair is essential for the subsequent hydrolysis of the intermediate ester formed in the initial step.

Haloacid dehalogenase(s) 590 mechanism of 590 Haloalkane dehalogenase(s) 591 active site structure 591 Halocyanin 883 Haloperoxidases 855, 889 Hammerhead ribozyme 649, 651s mechanism of action 651 Hammett equation 308... 

Balaban, A. T., et al., Correlation Between Structure and Normal Boiling Points of Haloalkanes C1-C4 Using Neural Networks. J. Chem. Inf. Comput. Sci., 1994 34, 1118-1121. 

The transition structures for the reactions of model disilenes with haloalkanes have been located using ab initio MO calculations.128... 

Damborsky, J., Rome, E., Jesenska, A., Nagata, Y., Klopman, G., Peijnenburg, W.J.G.M. (2001) Structure-specificity relationships for haloalkane, dehalogenases. Environ. Toxicol. Chem. 20, 2681-2689. 

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