Bioinformatics Journals

BMC Bioinformatics. 2000-. BioMedCentral. Electronic. elSSN 1471-2105. URL http //www.biomedcentral.com/1471-2105/. Covers computational methods used in the analysis and annotation of sequences and structures, plus other areas of computational biology. [Pg.46]

Bioinformatics. 1998-. Oxford, U.K. Oxford University Press. ISSN 1367-4803. URL http //www.bioinformatics. oupjoumals.org/. Scope includes genome bioinformatics and computational biology. [Pg.46]

Current Opinion in Chemical Biology. 1997-. Elsevier. Bi-monthly. ISSN 367-5931. Reviews. [Pg.46]

Journal of Biological Chemistry. 1905-. Baltimore, MD American Society of Biochemistry Molecular Biology. High-Wire Press. Weekly. ISSN 0021-9258. URL http //www.jbc.org/. [Pg.47]

B. Robson. 2005. Clinical and pharmacogenomic data mining 3. Zeta theory as a general tactic for clinical bioinformatics. Journal of Proteome Research 4(2) 445 55. [Pg.572]

MDL chemical data file (2010) Available from http //www.symyx.com/ do wnload s/publ ic/ctfile/ctfile. pd f Steinbeck, C., Han, Y., Kuhn, S., Horlacher, O., Luttmann, E., and Willighagen, E. (2003) The Chemistry Development Kit (CDK) an open-source Java library for chemo- and bioinformatics. Journal of Chemical Information and Computer Sciences, 43, 493-500. [Pg.55]

EMBL European Bioinformatics Institute nucleotide sequence database biblio., sub- stance, se- quence 20mio nucleotide seq., 28billion nucleotides journals, author submis- sions European Bioinformatics Institute free daily http //www.e- hi.ac.uk/embl/ index.html... [Pg.282]

Clonis YD. Affinity chromatography matures as bioinformatic and combinatorial tools develop. Journal of Chromatography A 2006 1101 1-24. [Pg.97]

The MIAME standard defines the minimum information investigators must report for a microarray experiment to be reproduced. The MAGE standard was born partially from MIAME, and the European Bioinformatics Institute used MIAME and MAGE to guide the development of ArrayEx-press, their public genomic data repository (34). Sample annotation lies at the heart of MIAME, underscoring the need to understand as completely as possible the experimental conditions that may influence the microarray data. Many journals that publish microarray data require the submission of MIAME-supportive microarray data to a public genomic data repository as a condition of publication. These typically include submission of protocols species, strains, and sex used for in vivo studies cell line name and culture conditions for in vitro studies, and other relevant information. [Pg.534]

Klinger, R., Friedrich, C.M., Mevissen, H.T., Fluck, J., Hofmann-Apitius, M., Furlong, L.I., Sanz, F. 2007. Identifying gene-specific variations in biomedical text. Journal of Bioinformatics and Computational Biology. 5(6) 1277-96. [Pg.148]

The biological utilization of the many types and amounts of information gathered by different methods is aided by the complex science of bioinformatics, i.e., the use of computers for the storage or analysis of biological information. Also there is a journal by that name. There is a recent catalog of the computer-based resources that provide access to many of the collections of information on bioinformatics, and lists of key words and related items. ... [Pg.1901]

American Journal of Pharmacogenomics (Adis) Bioinformatics (Oxford)... [Pg.1426]

Lopes RS, Resende NM, Honorio-Franfa AC et al (2013) Application of bioinformatics in chronobiology research. Scientific World Journal 2013 153839... [Pg.16]

Kim, S. and Lee, J. (2007) BAG A Graph Theoretic Sequence Clustering Algorithm. International Journal of Data Mining and Bioinformatics. 1(2), 178-200. [Pg.145]

Friedman, C., P. Kra, H. Yu, M. Krauthammer, and A. Rzhetsky. 2001. GENIES A natural-language processing system for the extraction of molecular pathways from journal articles. Bioinformatics 17, Suppl. no. 1 S74—82. [Pg.282]

Goble, C. A., R. Stevens, G. Ng, S. Bechhofer, N. W. Paton, R G. Baker, M. Peim, and A. Brass. 2001. Transparent access to multiple bioinformatics information sources. IBM Systems Journal, Special Issue 40 532-52. [Pg.479]

Sanishvili, R., Yakunin, A. F., Laskowski, R. A, Skarina, T., Evdokimova, E., Doherty-Kirby, A, et al. (2003). Integrating structure, bioinformatics, and enzymology to discover function BioH, a new carboxylesterase from Escherichia coli. The Journal of Biological Chemistry, 278, 26039-26045. [Pg.564]

Grosdidier, S., Totrov, M., and Fernandez-Recio, J. (2009) Computer applications to prediction of protein-protein interactions and rational drug design. Journal of Advances and Application in Bioinformatics and Chemistry, 2009 (2), 101-123. [Pg.462]

Davtyan, A, Schafer, N. R, Zheng, W, dementi, C., Wolynes, P. G., and Papoian, G. A. (2012). AWSEM-MD Protein Structure prediction using coarsegrained physical potentials and bioinformatically based local structure biasing. The Journal of Physical Chemistry B116,29, pp. 8494-8503. [Pg.566]

Li W. 2012. Volcano plots in analyzing differential expression with mRNA microarrays. Journal of Bioinformatics and Computational Biology 10(6) 1231003. doi 10.1142/S0219720012310038. [Pg.92]

Bertini I, Rosato A From genes to metalloproteins A bioinformatic approach. European Journal of Inorganic Chemistry 2007, 2007(18) 2546—2555. [Pg.150]

Humphreys, K., Demetriou, G., and Gaizauskas, R. (2000) Bioinformatics applications of information extraction from scientific journal papers. Journal of Information Science, 26(2), 75-85. [Pg.433]

Derwent Biotechnology Resource. 1982-. London Thomson Derwent. International coverage of journals, conference proceedings, and patents focused on all aspects of biotechnology and associated sciences. Topics include bioinformatics, genomics, biotechnological processes, and microbiology. [Pg.98]

Niemela et al., 2009. Bioinformatics and Computational method for lipidomics. Journal of Chromatography B, 877 2855-2862. [Pg.355]

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