Threonine pyridoxal reaction

The metabolism of P-hydroxy-a-amino adds involves pyridoxal phosphate-dependent enzymes, dassified as serine hydroxymethyltransferase (SHMT) (EC 2.1.2.1) or threonine aldolases (ThrA L-threonine selective = EC 4.1.2.5, L-aHo-threonine selective = EC 4.1.2.6). Both enzymes catalyze reversible aldol-type deavage reactions yielding glycine (120) and an aldehyde (Eigure 10.45) [192]. 

L-Serine dehydratase [EC 4.2.1.13], also known as serine deaminase and L-hydroxyaminoacid dehydratase, catalyzes the pyridoxal-phosphate-dependent hydrolysis of L-serine to produce pyruvate, ammonia, and water. In a number of organisms, this reaction is also catalyzed by threonine dehydratase. 

This pyridoxal-phosphate-dependent enzyme [EC 2.1.2.1], which has a recommended EC name of glycine hydroxymethyltransferase, catalyzes the reversible reaction of 5,10-methylenetetrahydrofolate with glycine and water to produce tetrahydrofolate and L-serine. The enzyme will also catalyze the reaction of glycine with acetaldehyde to form L-threonine as well as with 4-tri-methylammoniobutanal to form 3-hydioxy-N, N, N -trimethyl-L-lysine. 

The product of the PNP enzyme, FDRP 9 has been purified and characterised. The evidence suggests that FDRP 9 is then isomerised to 5-fluoro-5-deoxyribulose-1-phosphate 10, acted upon by an isomerase (Scheme 7). Such ribulose phosphates are well-known products of aldolases and a reverse aldol reaction will clearly generate fluoroacetaldehyde 11. Fluoroacetaldehyde 11 is then converted after oxidation to FAc 1. We have also shown that there is a pyridoxal phosphate (PLP)-dependent enzyme which converts fluoroacetaldehyde 11 and L-threonine 12 to 4-FT 2 and acetaldehyde in a transaldol reaction as shown in Scheme 8. Thus, all of the biosynthetic steps from fluoride ion to FAc 1 and 4-FT 2 can be rationalised as illustrated in Scheme 7. 

Several nickel(II) complexes have been reported with Schiff bases derived from the condensation of salicylaldehyde and various amino acids. The structures of the complexes were investigated by means of electronic and NMR spectra as well as X-ray crystallography.2336-2341 Recently the X-ray structure of complex (321), prepared by the reaction of pyridoxal-HCl, o-phospho-DL-threonine and N NOsVfiHaO at pH 5, has been reported.2341... 

Vanadyl and copper(n) ions catalyse the /J-elimination reaction of O-phospho-threonine in the presence of pyridoxal.429 Equilibrium spectroscopic studies of the threonine-metal ion-pyridoxal system have identified a metal-ion complex of the amino-acid-pyridoxal Schiff base. The catalytic effect of the metal is ascribed to its electron-with drawing effecCIt was suggested that the specific catalytic effect of Cu2 + and V02+ arises from their reluctance to co-ordinate the phosphate in an axial position. Other metal ions such as nickel can also form the Schiff base complex but probably stabilize the phosphothreonine system by chelate formation. 

Pyridoxal Phosphate Reaction Mechanisms Threonine can be broken down by the enzyme threonine dehydratase, which catalyzes the conversion of threonine to a-ketobutyrate and ammonia. The enzyme uses PLP as a cofactor. Suggest a mechanism for this reaction, based on the mechanisms in Figure 18-6. Note that this reaction includes an elimination at the j8 carbon of threonine. 

The glycine-dependent aldolases contain a cofactor pyridoxal phosphate (PLP). Binding of glycine to it as an imine enables the deprotonation necessary for the carbon-carbon bond forming reaction, with pyridine acting as an electron sink. The subsequent 100% atom efficient reaction with an aldehyde establishes the new bond and two new stereocenters (Scheme 5.30). Of all the glycine-dependent aldolases only L-threonine aldolase (LTA) is commonly used [40, 43, 52]. 

The glycine-dependent aldolases are pyridoxal 5-phosphate dependent enzymes that catalyze the reversible aldol reaction, where glycine and an acceptor aldehyde form a (i-hydroxy-a-amino acid (Scheme 5.47).74 Serine hydroxymethyltransferases, SHMT (EC 2.1.2.1), and threonine aldolases, two types of glycine dependent aldolases, have been isolated. In... 

Figure 23.12. Bond Cleavage by PLP Enzymes. Pyridoxal phosphate enzymes lahilize one of three bonds at the a-carhon atom of an amino acid substrate. For example, bond a is labilized by aminotransferases, bond b by decarboxylases, and bond c by aldolases (such as threonine aldolases). PLP enzymes also catalyze reactions at the ()- and y-carbon atoms of amino acids. 

A transferase that also has aldolase activity and has been used to prepare a number of chiral compounds is the enzyme serine hydroxymethyltransferase (SHMT) (EC 2.1.2.1). This enzyme, also known as threonine aldolase, catalyzes the physiological reaction of the interconversion of serine and glycine with pyridoxal phosphate (PLP) and tetrahydrofolate (FH4) as the shuttling cofactor of the C-1 unit. It also catalyzes a number of other reactions, some of which are independent of PLP and FH4 [72]. The SHMT-catalyzed aldolase reaction generates two stereocenters, which it does stereospecifically at the (/.-carbon, whereas it is less strict at the [l-carbon (Scheme 13). Nevertheless, this enzyme from porcine liver, Escherichia coU and Candida humicola (threonine aldolase) has been used to prepare a number of P-hydroxy-a-amino acids [73-76],... 

The non-enzymic dephosphorylation of O-phosphorothreonine which is brought about by pyridoxal in aqueous media has been investigated and a mechanism for the reaction has been proposed (Scheme 2). Copper(ii) and oxovanadium(iv) ions exert a strong catalytic effect and the dephosphorylation proceeds with C—O fission. The initial formation of a Schiff base may occur, followed by the loss of a proton from the -carbon atom of the threonine. 0-Phosphoro-a-methylserine, which does not possess an a-proton, does not dephosphorylate readily in aqueous solution. 

Serine and threonine dehydrases. Serine and threonine are not substrates in transamination reactions. Their amino groups are removed by the pyridoxal phosphate-requiring hepatic enzymes serine dehydratase and threonine dehydratase. The carbon skeleton products of these reactions are pyruvate and a-keto-butyrate, respectively. 

The most useful, and thus far successful, examples have involved irreversible reactions of nucleophilic functions of an enzyme s reactive site with an enzymatically activated Kcat inhibitor of a Michael-type addition reaction. The activation invariably requires participation of the enzyme s prosthetic group (e.g., flavin of monoamine oxidase) or coenzymes such as pyridoxal (vitamin B) as its phosphate, which is associated with several enzymes (e.g., threonine dehydrase, ornithine decarboxylase, a-ketoglutarate transaminase). 

All amino acids except lysine and threonine undergo transamination reactions. The enzymes catalyzing these reactions are known as transaminases or aminotransferases. For most of these reactions, a-ketoglutarate and glutamate serve as one of the a-keto acid-amino acid pairs. Pyridoxal phosphate is the cofactor, and the mechanism of the reaction is indicated in Figure 38.4. 

In addition to glutamate, a number of amino acids release their nitrogen as NH4 (see Fig. 38.5). Histidine may be directly deaminated to form NH4 and urocanate. The deaminations of serine and threonine are dehydration reactions that require pyridoxal phosphate and are catalyzed by serine dehydratase. Serine forms pyruvate, and threonine forms a-ketobutyrate. In both cases, NH4 is released. 

Fig. 38.5. Summary of the sources of NH4 for the urea cycle. All of the reactions are irreversible except glutamate dehydrogenase (GDH). Only the dehydratase reactions, which produce NH4 from serine and threonine, require pyridoxal phosphate as a cofactor. The reactions that are not shown occurring in the muscle or the gut can all occur in the liver, where the NH4 generated can be converted to urea. The purine nucleotide cycle of the brain and muscle is further described in Chapter 41.

F. 393. Pyridoxal phosphate covalently attached to an amino acid substrate. The arrows indicate which bonds are broken for the various typies of reactions in which pyridoxal phosphate is involved. The X and Y represent leaving groups that may be present on the amino acid (such as the hydroxyl group on serine or threonine). 

Glycine can be synthesized from serine and, to a minor extent, threonine. The major route from serine is by a reversible reaction that involves FH4 and pyridoxal phosphate (Fig. 39.6). Tettahydrofolate is a coenzyme that transfers one-carbon groups at different levels of oxidation. It is derived from the vitamin folate and is discussed in more detail in Chapter 40. The minor pathway for glycine production involves threonine degradation (this is an aldolase-like reaction because threonine contains a hydroxyl group located two carbons from the carbonyl group). 

Mammalian tissues contain enzymes that catalyze the nonoxidative deamination of serine, threonine, and homoserine. Since the postulated reaction mechanism involves a dehydration before the deamination, these enzymes are called dehydrases. L-Serine, L-threonine, and L-homoserine dehydrases have been partially purified and all are specific for the L-amino acid. Serine and threonine dehydrases require pyridoxal phosphate, ATP, and glutathione for activity. Pyridoxal phosphate requires the homoserine enzyme, but the need for ATP and glutathione has not been demonstrated. The reaction is likely to involve the formation of a Schiff base. The homoserine dehydrase has been... 

Aspartate 4-semialdehyde, seen, for example, in Scheme 12.13, which provided a pathway for the biosynthesis of the essential amino acid methionine (Met, M) and in Scheme 12.14, which holds a representation of the biosynthesis of threonine (Thr, T), is also a place to begin to describe a pathway to lysine (Lys, K). As shown in Scheme 12.19, aspartate 4-semialdehyde undergoes an aldol-type reaction with pyruvate (CHsCOCO ") in the presence of dihydropicoUnate synthase (EC 4.2.1.52) to produce a series of intermediates that, it is presumed, lead to (5)-23-dihydropyridine-2,6-dicarboxylate. Then, dihydrodipicolinate reductase (EC 1.3.1.26) working with NADPH produces the tetrahydropyridine, (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate.This heterocycle, in the presence of glutamate (Glu, E) and water, is capable of transamination directly to 2-oxoglutarate and (2S, 6S)-2,3-diaminopimelate in the presence of LL-diaminopimelate aminotransferase (EC 2.6.1.83), while the latter, in the presence of the pyridoxal dependent racemase... 

Model reactions of this type have been studied in which the catalyst is pyridoxal plus a metal. The enzymatic reactions all appear to use pyridoxal phosphate as a cofactor, and in the case of a bacterial system, Mn" is also required. A major difference between the enzymatic and the model reactions is the requirement for a folic acid cofactor in the former. The formation of glycine and acetaldehyde from L-threonine and L-allo-threonine has been described by Lin and Greenberg. Their partially purified enzyme, threonine aldolase, was not shown to require any cofactors, and the reaction was not reversed. This is in contrast to the results of nonenzymatic experiments in which pyridoxal and a metal catalyze the reversible cleavage of threonine. 

The reactions of amino acids, catalysed by enzymes requiring a derivative of vitamin Bg (Figure 5a) as cofactor, have been the subject of a number of mechanistic studies. Enzymes catalysing decarboxylation, racemisation, dehydration (of serine or threonine) or desulphy-dration (of cysteine) require pyridoxal-5 -phosphate as cofactor (Figure 5b), and are dealt with in later sections. Enzymes catalysing transamination, on the other hand, require either pyridoxal-5 -phosphate or pyridoxamine-5 -phosphate (Figure 5c). Snell and coworkers showed that the reactions of amino acids normally... 

Kallio has partially purified the cysteine and homocysteine desulfhydrases from P. morganii and found that pyridoxal phosphate was active as cofactor. The possibility that threonine might be an intermediate in reaction 21 was ruled out by the finding that threonine was relatively inactive as a substrate. The role of pyridoxal phosphate as cofactor for animal desulfhydrases is suggested from the findings of Braunstein and Azarkh" that liver homogenates from pyridoxine-deficient animals had lower cysteine desulfhydrase activity than those from normal animals. Dietary supplementation with pyridoxine raised the activity to the normal level. 

Covalent modifications of proteins serve many purposes (1-4). Some are structural and affect the three dimensional structure of proteins, such as disulfide bonds or cross linking of collagen chains via allysine side chains. There are a many different modifications that allow for the attachment of a variety of nonpeptide prosthetic groups to the protein. The attachment of the heme group to cysteine in c type cytochromes and that of biotin or pyridoxal phosphate to lysine are but a few examples. Some processes, such as cysteine isoprenylation or N myristoylation, allow proteins to become tightly associated with membranes. In other situations, a protein may be regulated by a reversible reaction, such as phosphorylation. The best know examples of this are serine, threonine, and tyrosine phosphate esters. In many other cases, the function of a particular modification is less evident. 

An antibody that mimics threonine aldolase, which uses pyridoxal as the cofactor to catalyze the aldol reaction of glycine with aldehydes, has also been reported. Antibody 10H2 catalyzed the retro-aldol reaction of jd-hydroxy-a-amino acid in the presence of pyridoxal [55]. 

Aminotransferases catalyse the reaction reversibly using a prosthetic group, pyridoxal phosphate, derived from vitamin B6. Transamination reactions result in the formation of L-glutamate (the new amino acid) and an (X-keto acid. Lysine and threonine do not take part in transamination reactions. 

---