Sequences characterization

The sensitivity of 13C solid-state chemical shifts to small conformational changes is well illustrated by the case of i-PB. Table 1 summarizes some chemical shifts differences for the forms, which have been interpreted in terms of variations of the y-shielding parameter corrected for the deviations, with respect to the exactly G conformations, in the slightly different nearly gauche — nearly trans sequences, characterizing the three crystalline forms of i-PB [116]. 

Martin MC, M Fernandez, DM Linares, MA Alvarez (2005) Sequencing, characterization and transcriptional analysis of the histidine decarboxylase operon on Lactobacillus buchneri. Microbiology (UK) 151 1219-1229. 

Determination of Compositional Sequences. In the copolymerization of MMA and MAA or TBTM, compositional dyads and triads are generated. These sequences are determined by the relative concentration of monomers as well as by their relative reactivity. These compositional sequences characterize the material and allow predictions of activity based on structure by comparison with field tested polymers. 

De Zoysa, M., Whang, I., Lee, Y., Lee, S., Lee, J. S., and Lee, J. (2010). Defensin from disk abalone Haliotis discus discus Molecular cloning, sequence characterization and immune response against bacterial infection. Fish Shellfish Immunol. 28, 261-266. 

Chandra T Stackhouse R, Kidd VJ, Woo SLC, Isolation and sequence characterization of a cDNA clone of human antithrombin III. Proc Natl Acad Sci USA 1978 80 1845-1848. 

Although chemically quite different, nucleic acids resemble proteins in a fundamental way there is a long chain—a backbone—that is the same (except for length) in all nucleic acid molecules and attached to this backbone are various groups, which by their nature and sequence characterize each individual nucleic acid. 

Caetano, A.R., R.K. Johnson and D. Pomp. Generation and sequence characterization of a normalized cDNA library from swine ovarian follicles. Mamm. Genome 14 65-70, 2003. 

There are numerous techniques to measure the recombination lifetime. Some of the better known are photoconductive decay (13). diode reverse recovery (14). diode open circuit voltage decay (15). surface photovoltage (JL ) and forward-biased pn junction I-V characteristic (17. I will describe one particular photoconductive decay method, because it is a relatively new, non-contact method that requires no junctions. This makes it very suitable for a large number of measurements as for a process sequence characterization tool. 

Geisler N, Plessmann U, Weber K. Amino acid sequence characterization of mammalian vimentin, the mesenchymal intermediate filament protein. PEBS Lett. 1983 163 22-24. 

The most direct way to measure the swelling of a sequence characterized by an equivalent Brownian area s, would consist in labelling the ends of this... 

Protein domains, the next level up in the hierarchy of protein constitution, are important enough to warrant a separate discussion. Domains can be defined based on function, structure, or sequence characterization in many cases the different approaches are compatible. We naturally adopt a structure-based definition a protein domain is a spatially distinct structure (or structural component) that could conceivably fold and function in isolation [63]. Some proteins consist of a single domain, while others are composed of multiple domains each folded separately from a subsection of the underlying amino acid chain. To this point, our notion of the genotype to phenotype relationship has been protein sequence protein structure. Given the discrete spatial nature of domains, protein SM sequence -> domain would be an equally valid definition. In fact, the notion of a protein fold (as in, "this fold is highly designable") translates naturally to the protein domain concept. 

In a sense, the presence of LRC in a given copolymer sequence characterizes the information complexit/ of the sequence. It is natural to expect that the content of information in the sequences of biopolymers (i.e., proteins, DNA, RNA) is relatively high in comparison with random sequences where it should be almost zero. If we then analyze the primary stmcmres of the globular proteins and compare them with the simple primary stmcture of conventional synthetic copolymers, we should draw the perceptive conclusion that protein-originated texts are much more informative and specific. 

Event-tree models in a level 2 PSA mainly account for physical/chemical phenomena. Details of the phenomena and their consequences are reduced to a rather coarse grid of time (i.e. early , late or before , after ), position (i.e. top , bottom ), magnitudes (i.e. small , medium , large ), etc. This simphfi-cation involves the risk, on the one side, that accident sequences characterized by specific details in the timing or in process conditions remain unknown, and. 

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