Reactions with enzymic synthesis

N. K. Kochetkov and V. N. Shibaev, Analogs of glucose uridine diphosphate Synthesis and reactions with enzymes, Russian Chem. Bull., 23 (1974) 1106-1121. 

Applications of whole-cell biocatalytic membrane reactors, in the agro-food industry and in pharmaceutical and biomedical treatments are listed by Giorno and Drioli [3], Frazeres and Cabral [9] have reviewed the most important applications of enzyme membrane reactors such as hydrolysis of macromolecules, biotransformation of lipids, reactions with cofactors, synthesis of peptides, optical resolution of amino acids. Another widespread application of the membrane bioreactor is the wastewater treatment will be discussed in a separate section. 

Among the large number of site-specific reagents described in the literature, there are characteristics that are particularly desirable. In addition to structural similarity to the substrate or regulatory compound and the potential to react with many types of amino acids, these characteristics include water solubility, ease of synthesis, acceptable stability in aqueous solution over a moderate pH range, and the ability to form a stoichiometric, stable, isolable, and readily identifiable product from the reaction with enzyme. In this chapter, several chemical classes of affinity labels are considered, their notable features are evaluated in terms of these criteria, and selected examples of their application are presented. 

Aza-peptide, 208-216 design of, 208 kinetics, 211-214 reaction with enzymes, 214-216 synthesis of, 209-211... 

PRA-isomerase lGP-synthase, a bifunctional enzyme from E. coli that catalyzes two reactions in the synthesis of tryptophan (Figure 4.6), has a polypeptide chain that forms two a/p barrels. The stmcture of this enzyme, solved at 2.8 A in the laboratory of Hans Jansonius in Basel, Switzerland, showed that residues 48-254 form one barrel with IGP-synthase activity, while residues 255-450 form the second barrel with PRA-isomerase activity (Figure 4.7). 

Several approaches to enantioselective synthesis have been taken, but the most efficient are those that use chiral catalysts to temporarily hold a substrate molecule in an unsymmetrical environment—exactly the same strategy that nature uses when catalyzing reactions with chiral enzymes. While in that unsymmetrical environment, the substrate may be more open to reaction on one side than on another, leading to an excess of one enantiomeric product over another. As an analog)7, think about picking up a coffee mug in your... 

Pyruvate kinase (PK) is one of the three postulated rate-controlling enzymes of glycolysis. The high-energy phosphate of phosphoenolpyruvate is transferred to ADP by this enzyme, which requires for its activity both monovalent and divalent cations. Enolpyruvate formed in this reaction is converted spontaneously to the keto form of pyruvate with the synthesis of one ATP molecule. PK has four isozymes in mammals M, M2, L, and R. The M2 type, which is considered to be the prototype, is the only form detected in early fetal tissues and is expressed in many adult tissues. This form is progressively replaced by the M( type in the skeletal muscle, heart, and brain by the L type in the liver and by the R type in red blood cells during development or differentiation (M26). The M, and M2 isozymes display Michaelis-Menten kinetics with respect to phosphoenolpyruvate. The Mj isozyme is not affected by fructose-1,6-diphosphate (F-1,6-DP) and the M2 is al-losterically activated by this compound. Type L and R exhibit cooperatively in... 

In this review we shall not deal with the synthesis of this coordination complex, but we shall deal with the chemical properties of B 12-coenzymes with special emphasis on how these properties relate to Bi2-enzyme mechanisms. Also, we shall show how B -catalyzed methyl-transfer reactions have special significance in the biosynthesis of methylated heavy metals in the aqueous environment, and how the synthesis of these organometallic compounds has special relevance to problems concerned with continuing global environmental health hazards. 

Lenhert and Hodgkin (15) revealed with X-ray diffraction techniques that 5 -deoxyadenosylcobalamin (Bi2-coenzyme) contained a cobalt-carbon o-bond (Fig. 3). The discovery of this stable Co—C-tr-bond interested coordination chemists, and the search for methods of synthesizing coen-zyme-Bi2 together with analogous alkyl-cobalt corrinoids from Vitamin B12 was started. In short order the partial chemical synthesis of 5 -de-oxyadenosylcobalamin was worked out in Smith s laboratory (22), and the chemical synthesis of methylcobalamin provided a second B 12-coenzyme which was found to be active in methyl-transfer enzymes (23). A general reaction for the synthesis of alkylcorrinoids is shown in Fig. 4. 

A classical approach to driving the unfavorable equilibrium of an enzymatic process is to couple it to another, irreversible enzymatic process. Griengl and coworkers have applied this concept to asymmetric synthesis of 1,2-amino alcohols with a threonine aldolase [24] (Figure 6.7). While the equilibrium in threonine aldolase reactions typically does not favor the synthetic direction, and the bond formation leads to nearly equal amounts of two diastereomers, coupling the aldolase reaction with a selective tyrosine decarboxylase leads to irreversible formation of aryl amino alcohols in reasonable enantiomeric excess via a dynamic kinetic asymmetric transformation. A one-pot, two-enzyme asymmetric synthesis of amino alcohols, including noradrenaline and octopamine, from readily available starting materials was developed [25]. 

Reactions with Non-Commerdally Available Isolated Enzymes for Preparative-Scale Synthesis... 

A patent procedure for formation of compounds 19 from simple tartaric acid derivatives has appeared <06USP047129> and various new routes to chiral dioxolanones include synthesis of dioxolan-2-ones either by transition metal-mediated asymmetric synthesis <06T1864> or enzyme-mediated kinetic resolution <06H(68)1329> and a new synthesis of the chiral dioxolan-4-ones 21 from lactic or mandelic acid involving initial formation of intermediates 20 with trimethyl orthoformate in cyclohexane followed by reaction with pivalaldehyde <06S3915>. 

Cram and co-workers have been successful in modifying certain of their cavitands such that reactions with a bound substrate are promoted. Such systems provide a first step towards the synthesis of rudimentary enzymes (Cram, Katz, Dicker, 1984). One example of this type, involving a binding step followed by a fast acylation step, is illustrated by Figure 5.1. This sequence resembles part of the mechanism used by chymo-trypsin to cleave a peptide bond. Thus, the enzymic process entails several stages but, like the model system, begins with a binding step followed by a crucial transacylation step. 

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