Proteins reactions with alkylating agents

FIGURE 5.18 Methods for cleavage of disulfide bonds in proteins, (a) Oxidative cleavage by reaction with performic acid, (b) Reductive cleavage with snlfliydryl compounds. Disulfide bridges can be broken by reduction of the S—S link with snlfliydryl agents such as 2-mercaptoethanol or dithiothreitol. Because reaction between the newly reduced —SH groups to re-establish disulfide bonds is a likelihood, S—S reduction must be followed by —SH modification (1) alkylation with iodoac-etate (ICH,COOH) or (2) modification with 3-bromopropylamine (Br— (CH,)3—NH,). 

In the presence of an excess of the glutamine analog, DON, the enzyme is readily inactivated irreversibly (7). This substance behaves as an active-site-directed alkylating agent in a number of enzymes which utilize glutamine as substrate (3). With the use of 6-I4C-DON, the amount of inhibitor covalently bound to protein can be directly measured and, as shown in Fig. 1, this amount is linearly correlated with the extent of inhibition of catalytic activity. The simplest explanation of this behavior is that irreversible reaction of one molecule of DON with the enzyme inactivates one catalytic site, probably by combination with an essential group at that site. With this assumption the concentration of active sites in an enzyme preparation may be calculated for the... 

Epoxide (3-member cyclic ether) groups are effective broad-spectrum alkylating agents which have not as yet received a great deal of attention in the design of affinity labels. Their reactions with proteins were first studied by Fraenkel-Conrat (1944) who found that they reacted with the basic forms of most nucleophiles in proteins. Their... 

The bifunctional alkylating agents also inhibit RNA and protein synthesis, especially at higher doses. Interference with other cellular reactions should not be ruled out. Table 4-3 lists some of the important alkylating agents currently in use. 

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