Plant metabolome

Tolstikov, V.V., Lommen, A., Nakanishi, K., Tanaka, N., Fiehn, O. (2003). Monolithic silica-based capillary reversed-phase liquid chromatography/electrospray mass spectrometry for plant metabolomics. Anal. Chem. 75, 6737-6740. 

Ketchum, R.E.B., Rithner, C.D., Qiu, D. et al. (2003) Taxus metabolomics methyl jasmonate preferentially induces production of taxoids oxygenated at C-13 in Taxus x media cell cultures. Plant Metabolomics, 62, 901-909. 

L. W. Sumner, P. Mendes, and R. Dixon, Plant metabolomics Large scale phytochemistry in the functional genomics era. Phytochemistry 62, 817 836 (2003). 

Nikolau, B.J. Wurtele, E.S. 2007. Concepts in Plant Metabolomics. Springer, Dordrecht, 296 pages. 

Hall RD, Brower ID, Eitzgerald MA. Plant metabolomics and its potential application for human nutrition. Physiol. Plant. 2008 132 162-175. 

Avato, P. Guglielmi, G. First International Congress on Plant Metabolomics, Book of Abstracts, PI 8, 2002. 

Saito, K., Dixon, R. A., Willmitzer, L. (Eds.), Plant Metabolomics, Springer, Berlin, Heidelberg, 2006. 

Dunn WB. Current trends and future requirements for the mass spectrometric investigation of microbial, mammalian and plant metabolomes. Phys Biol 2008 5 1-24. 

Hagel JM Facchini PJ. Plant metabolomics Analytical platforms and integration with functional genomics. Phytochem Rev 2008 7 479-497. 

Allwood, J. W. and Goodacre, R. 2009. An introduction to liquid chromatography-mass spectrometry instmmentation apphed in plant metabolomic analyses. Phytochem. Anal. 21 33-41. 

De Vos, R.C.H., Moco, S., Lommen, A., Keurentjes, J.J.B., Bino, R.J., Hall, R.D. (2007) Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry. Nature Protocols, 2,118-791. 

Schauer, N., Femie, A.R. (2006) Plant metabolomics towards biological function and mechanism. Trends in Plant Science, 11, 508-516. 

Li, Y., Shrestha, B., Vertes, A. (2008) Atmospheric pressure infrared MALDI imaging mass spectrometry for plant metabolomics. Anal Chem, 80, 407—420. 

J. M. Hagel and P. J. Facchini, Plant Metabolomics Analytical Platforms and Integration with Functional Genomics , Phytochem. Rev., 2008, 7, 479. 

Tikunov, Y, Verstappen, F. HaU, R.D. (2006). A metabolic profiling of natural volatiles head-space trapping GC/MS. In Plant Metabolomics Methods and Protocols, Methods in Molecular Biology (ed. W. Weekwerth), pp. 39-53. Humana Press, Totowa. 

Verhoeven, H.A., De Vos, C.H.R., Bino, R.J. Hall, R.D. (2006). Plant metabolomics strategies based upon qaudrupole time of flight mass spectrometry (QTOF-MS). In Biotechnology in Agriculture and Forestry, Vol. 57 (eds K. Saito, R.A. Dixon L. Wflhnitzer), pp. 33-48. Springer-Verlag, Berlin. 

A proposed framework for the description of plant metabolomics experiments and their results. Nat. Biotechnol. 22 1601-1606... 

Ward JL, Baker JM, and Beale MH (2007) Recent applications of NMR spectroscopy in plant metabolomics. FEBS J. 274 1126-1131 Weckwerth W (2007) Metabolomics methods and protocols. Humana press, Totowa, NJ Weckwerth W (2008) Integration of metabolomics and proteomics in molecular plant physiology -coping with the complexity by data-dimension-ality reduction. Physiol. Plant. 132 176-189 Weckwerth W, Wenzel K, and Fiehn O (2004) Process for the integrated extraction, identification and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks. Proteomics 4 78-83 Wouters FS, Verveer PJ, and Bastiaens PIH (2001) Imaging biochemistry inside cells. Trends Cell Biol 11 203-211... 

Hall, R.D. 2006. Plant metabolomics from holistic hope, to hype, to hot topic. New Phytol 169 453-468. 

Enot D, Beckmann M, Draper J (2007) Detecting a difference assessing generalisability when modelling metabolome fingerprint data in longer term studies of genetically modified plants. Metabolomics 3 335-347... 

Fiehn O, Wohlgemuth G, Scholz M, et al. (2008) (Quality control for plant metabolomics reporting MSl-compliant studies Plant J 53 691-704 Frenzel T, Miller A, Engel K H (2002) Metabolite profiling - A fractionation method for analysis of major and minor compounds in rice grains. Cereal Chem 79 215-221... 

George C, Ridley WP, Obert JC, et al. (2004) Composition of grain and forage from com root-worm-protected com event MON 863 is equivalent to that of conventional com (Zea mays L.). J Agric Food Chem 52 4149-4158 Grata E, Boccard J, Guillarme D, et al. (2008) UPLC-TOF-MS for plant metabolomics A sequential approach for wound marker analysis in Arabidopsis thaliana. J Chrom B (2008) 871 261-270... 

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