Phenylpropanoids from shikimic acid pathway

Precursors of phenylpropanoids are synthesized from two basic pathways the shikimic acid pathway and the malonic pathway (see Fig. 3.1). The shikimic acid pathway produces most plant phenolics, whereas the malonic pathway, which is an important source of phenolics in fungi and bacteria, is less significant in higher plants. The shikimate pathway converts simple carbohydrate precursors into the amino acids phenylalanine and tyrosine. The synthesis of an intermediate in this pathway, shikimic acid, is blocked by the broad-spectrum herbicide glyphosate (i.e., Roundup). Because animals do not possess this synthetic pathway, they have no way to synthesize the three aromatic amino acids (i.e., phenylalanine, tyrosine, and tryptophan), which are therefore essential nutrients in animal diets. 

Phenylalanine Ammonia-Lyase. The building units of lignin are formed from carbohydrate via the shikimic acid pathway to give aromatic amino acids. Once the aromatic amino acids are formed, a key enzyme for the control of lignin precursor synthesis is phenylalanine ammonia-lyase (PAL) (1). This enzyme catalyzes the production of cinnamic acid from phenylalanine. It is very active in those tissues of the plant that become lignified and it is also a central enzyme for the production of other phenylpropanoid-derived compounds such as flavonoids and coumarins, which can occur in many parts of the plant and in many different organs (35). Radioactive phenylalanine and cinnamic acid are directly incorporated into lignin in vascular tissue (36). 

Many of these aromatic compounds are phenylpropanoids, compounds based on a phenylpropane skeleton. Phenylpropanoids are related in structure to the common amino acids phenylalanine and tyrosine, and many are derived from a biochemical pathway called the shikimic acid pathway. 

It has been noted that the chemical diversity of plant phenolics is as vast as the plant diversity itself. Most plant phenolics are derived directly from the shikimic acid (simple benzoic acids), shikimate (phenylpropanoid) pathway, or a combination of shikimate and acetate (phenylpropanoid-acetate) pathways. Products of each of these pathways undergo additional structural elaborations that result in a vast array of plant phenolics such as simple benzoic acid and ciimamic acid derivatives, monolig-nols, lignans and lignin, phenylpropenes, coumarins, stilbenes, flavonoids, anthocyanidins, and isollavonoids. 

Phenolic compounds include a wide range of secondary metabolites that are biosynthesised from carbohydrates through the shikimate pathway [14]. This is the biosynthetic route to the aromatic amino acids, phenylalanine, tyrosine, and tryptophan, and only occurs in microorganisms and plants. In the first step, the glycolytic intermediate phosphoenol pyruvate and the pentose phosphate intermediate erythrose-4-phosphate are condensed to 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP), a step catalysed by DAHP synthase. Intermediates of the shikimate pathway are 3-dehydroquinate, shikimate, and chorismate (Fig. 1). Phenylalanine is biosynthesised from chorismate, and from phenylalanine all the phenylpropanoids. Quinate is produced from 3-dehydroquinate and incorporated into chlorogenic and isochlorogenic acids (caffeoyl quinic acids) by combination with caffeic acid. Gallic acid is produced from shikimate. 

All phenylpropanoids are derived from cinnamic acid, which is formed from phenylalanine through the action of phenylalanine ammonia-lyase (PAL), which is considered the branch point enzyme between primary (shikimate pathway) and secondary metabolism [15]. 

The precursor substrates and enzymes necessary for the first committed steps often appear to have been recruited from primary metabolic pathways, such as glycolysis, the Krebs cycle, the pentose phosphate pathway and the shikimate pathway [32], For example, the aromatic amino acid s L-phenylalanine and L-tyrosine, produced by the shikimate pathway, are precursors for a wide spectrum of natural products including phenylpropanoids, flavonoids, lignins, coumarins, cyanogenic glycosides, glucosinolates, and alkaloids [33],... 

Ring B and the central three-carbon bridge forming the C ring (see Fig. 5.1) originate from the amino acid phenylalanine, itself a product of the shikimate pathway, a plastid-based process which generates aromatic amino acids from simple carbohydrate building blocks. Phenylalanine, and to a lesser extent tyrosine, are then fed into flavonoid biosynthesis via phenylpropanoid (C6-C3) metabolism (see Fig. 5.1). 

The biosynthetic pathway (Figure 10.5) of polyphenols, including phenolic acids is well known. Phenylalanine formed in plants via the shikimate pathway is a common precursor for most of the phenolic compounds. Forming hydroxycinnamic acids from phenylalanine requires hydroxylation and methylation steps. The formation of hydroxybenzoic acids is simple and they can directly be formed from the corresponding hydroxycinnamic acids with the loss of acetate or with an alternate path stemming from an intermediate in the phenylpropanoid pathway [69,77,78]. 

Benzoic and cinnamic acid derivatives and flavonoids are the two most distributed phenolics within plants. Polyphenolic units are biosynthesized via shikimate pathway, resulting in cinnamic acids C -C phenylpropanoid building block that also contributes to other plant phenolics backbones such as those from flavonoids (Q-Ca-Ce), anthocyanidins (C6-C3-C6), and coumarins (C6-C3). Stilbeneoids (C6-C2-C6) and benzoic acid derivatives (Cfi-Ci) such as gallic and ellagic acids are also synthesized through this metabolic pathway (Fig. 1). 

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