Kinetic templation method

CHEMICAL KINETICS TEMPLATE CHALLENGE METHOD PROCESSIVITY Template-directed assembly, MICROTUBULE ASSEMBLY Template-directed irreversible polymerization,... 

Metal ion template mediation in macrocyclic synthesis has been a part of the field since its inception, its importance having been realized early in the development of this area. Two specific roles for the metal ion in template reactions have been proposed. These are, in turn, kinetic and thermodynamic in origin." In the kinetic template effect, the arrangement of ligands already coordinated to the metal ion provides control in a subsequent condensation during which the macrocycle is formed. The thermodynamic effect serves to promote stabilization of a structure which would not be favored in the absence of a metal ion. Schiff base condensations tend to be dependent on this latter type of template effect. Some of the more routine and general synthetic procedures will be described here. A more in-depth treatment can be found in a review by Curtis, with particular emphasis on general methods as well as modifications of preformed macrocycles." ... 

Although some depolymerases act processively in cleaving their polymeric substrates, others act by what can be described as multiple attack which results in nonselective scission or random scission. The analysis of cleavage products during the course of enzyme-catalyzed depolymerization can provide important clues about the nature of the reaction. With random scission, the rate of bond scission must be proportional to the total number of unbroken bonds present in the solution. Thomas measured the rate of base addition in a pH-Stat (a device with an automated feedback servomotor that expels ti-trant from a syringe to maintain pH) to follow the kinetics of DNA bond scission by DNase. The number of bonds cleaved was linear with time, and this was indicative of random scission. In other cases, one may apply the template challenge method to assess the processivity of nucleic acid polymerases. See Processivity... 

Template or matrix polymerization can be defined as a method of polymer synthesis in which specific interactions between preformed macromolecule (template) and a growing chain are utilized. These interactions affect structure of the polymerization product (daughter polymer) and the kinetics of the process. The term template polymerization usually refers to one phase systems in which monomer, template, and the reaction product are soluble in the same solvent. 

In contrast to template polycondensation or ring-opening polymerization, template radical polymerization kinetics has been a subject of many papers. Tan and Challa proposed to use the relationship between polymerization rate and concentration of monomer or template as a criterion for distinguishing between Type I and Type II template polymerization. The most popular method is to examine the initial rate or relative rate, Rr, as a function of base mole concentration of the template, [T], at a constant monomer concentration, [M]. For Type I, when strong interactions exist between the monomer and the template, Rr vs. [T] shows a maximum at [T] = [M]q. For type II, Rr increases with [T] to the critical concentration of the template c (the concentration in which template macromolecules start to overlap with each other), and then R is stable, c (concentration in mols per volume) depends on the molecular weight of the template. 

Many experimental techniques were used to examine polymerization kinetics and products of template polymerization. In kinetic measurements, many conventional methods of determination of monomer concentration were applied, very often UV spectrometry or bromometric titration. For many systems examined, bromometric titration gives results comparable with the results obtained by other methods. However, systems were found in which the method successful for blank reaction gives results incomparable with another analytical methods. Perhaps some specific reaction with the complex formed affects the analytical procedure." ... 

IR spectrometry is a convenient method of examination of template copolymerization and polymerization kinetics. For instance, IR spectroscopy was applied in order to examine kinetics of template polymerization of multiacrylate according to the reaction ... 

The radical is generated on the sugar template using mostly the tin hydride method and halo derivatives [72,87,89], thionocarbonate [90-91], or selenium derivatives [91,94, 95]. Again, in these reactions, the kinetically controlled 5-exo cyclization is always... 

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